Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_M01
         (1184 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46787-4|CAA86742.1|  166|Caenorhabditis elegans Hypothetical pr...   134   1e-31

>Z46787-4|CAA86742.1|  166|Caenorhabditis elegans Hypothetical
           protein C16C10.4 protein.
          Length = 166

 Score =  134 bits (324), Expect = 1e-31
 Identities = 62/114 (54%), Positives = 84/114 (73%), Gaps = 3/114 (2%)
 Frame = +1

Query: 229 PLLLRVXCSTGRHNSPGXXVR---GNVPQNELQIYTWMDATLRELTGLVKEVNPETRRKG 399
           P+LLRV  +  RHN          G+VP +ELQ++TWMD +LRELT L+KEVNP+ RRKG
Sbjct: 25  PMLLRVFVANNRHNPMSEYNSRNGGSVPPSELQMHTWMDCSLRELTSLIKEVNPDARRKG 84

Query: 400 TYFDFAIVYPDMRSPTYRMREIGVTCSGQRGGDDNKTLSQLKFQIGNYLDISIT 561
           T FDFAIV  D  SP Y +R++G T +G+RG DDNKTL Q KF++G+++D++I+
Sbjct: 85  TTFDFAIVQADRGSPRYILRDVGNTTNGERGIDDNKTLQQCKFEVGDFVDVAIS 138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,204,875
Number of Sequences: 27780
Number of extensions: 256109
Number of successful extensions: 577
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3245116438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)