Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_L23
         (1149 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    99   5e-23
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.81 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   3.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   5.7  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   7.6  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 99.1 bits (236), Expect = 5e-23
 Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 13/205 (6%)
 Frame = +3

Query: 270 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL---- 437
           L+P +L  +   G+  P+ +Q   IP  + G D++  A++G GKTA F+L  +  L    
Sbjct: 165 LRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPIIHNLLSDK 224

Query: 438 -----EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 602
                E + +   V++M  TRELA QI+ + ++F+ Y S V+V+V +GG         + 
Sbjct: 225 NPPNTENNCAQPVVVIMSPTRELAIQIADQGKKFA-YNSTVKVAVIYGGTSTNHQRGRIL 283

Query: 603 TACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDMRRDVQEIFRN----T 770
             C HI+V TPGR+                F+LDE D+ML+ +    DV+E+  +     
Sbjct: 284 GGC-HILVATPGRLKDFVNRGNVSFNSLKYFVLDEADRMLD-MGFLGDVEEMLSHQSMPA 341

Query: 771 PHGKQVMMFSATLSKEIRPVCKKFM 845
              +Q +MFSAT  +E++ +  KF+
Sbjct: 342 TGERQTLMFSATFPEEVQQLAGKFL 366


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.4 bits (53), Expect = 0.81
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +3

Query: 465 LVMCHTRELAFQISK--EYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVV 626
           LV+   R+LA  ++    +ER    ++  ++SVFFG  P+     +   AC  +VV
Sbjct: 147 LVLYEARKLANVVTDWVNFERIYYKLTKKKLSVFFGNKPVILTVVLPLLACGVMVV 202


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +3

Query: 312 EHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESH 455
           E  S VQ      A+ G+ ++C +     +  VF+   L +  P  SH
Sbjct: 274 EISSLVQTAITLVAMCGLVLICDSAKSESQQTVFLCYKLMEKFPERSH 321


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +1

Query: 181 LLTGL-PKWRQRRRLKDPTY 237
           LLT   PKW+ RR++  P +
Sbjct: 115 LLTSAGPKWQNRRKILTPAF 134


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 196 PKWRQRRRLKDPTY 237
           PKW+ RR++  P +
Sbjct: 121 PKWQNRRKILTPAF 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,648
Number of Sequences: 336
Number of extensions: 4711
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33403428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)