Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_L23
         (1149 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   100   2e-22

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 99.5 bits (237), Expect = 2e-22
 Identities = 63/228 (27%), Positives = 114/228 (50%), Gaps = 11/228 (4%)
 Frame = +3

Query: 219 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 398
           V G     H   F    L+ E++  +    +  P+ +Q   IP  + G D++  A++G G
Sbjct: 164 VSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSG 223

Query: 399 KTAVFVLATLQQLEPSESHV-------YVLVMCHTRELAFQISKEYERFSKYMSGVRVSV 557
           KTA F+L  +  L   E  +       Y++++  TRELA QI  E  +F+ + + ++V V
Sbjct: 224 KTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFA-HGTKLKVCV 282

Query: 558 FFGGMPIQKDEEVLKTACPHIVVGTPGRILAXXXXXXXXXXXXXXFILDECDKMLESLDM 737
            +GG  +Q   ++++  C H++V TPGR+L                +LDE D+ML+ +  
Sbjct: 283 SYGGTAVQHQLQLMRGGC-HVLVATPGRLLDFIDRGYVTFENVNFVVLDEADRMLD-MGF 340

Query: 738 RRDVQEIFRNTP----HGKQVMMFSATLSKEIRPVCKKFMQDPMEVYV 869
              ++++  +        +Q +MFSAT   EI+ +  KF+ + + V+V
Sbjct: 341 LPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQELAGKFLHNYICVFV 388


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 967,652
Number of Sequences: 2352
Number of extensions: 20063
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 129164052
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)