Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_L22
         (1141 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    25   0.94 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    24   2.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.8  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   5.0  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   8.8  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
          protein.
          Length = 405

 Score = 25.4 bits (53), Expect = 0.94
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 98 YYLPSWLQLQLVCLYTL 48
          YYLP+W  L L  L+T+
Sbjct: 30 YYLPNWTDLVLAGLFTM 46


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 891 WAVCTNPPFSPTAAP 935
           W V  +PP+SP  AP
Sbjct: 264 WDVLPHPPYSPDLAP 278


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 22  ESFKIPSFFSVYKQTNCNCSQD 87
           E   +P F+      NCNCS D
Sbjct: 668 EDRPLPEFYIGGNPFNCNCSMD 689


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 729 DTRRFPLEAPSCALLFRPCR 788
           + R FP++  SC L+   C+
Sbjct: 165 ELRNFPMDRQSCPLILGSCK 184


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 835 KRHASRREKGGQVSGKRQGRNRRAH 761
           KR  +++ +G + +     +NRRAH
Sbjct: 39  KRPKTKKSQGSRTTHNELEKNRRAH 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 269,328
Number of Sequences: 438
Number of extensions: 5833
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 38560320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)