Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_L20
         (1162 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC105294-1|AAI05295.1|  125|Homo sapiens hypothetical protein HS...   113   9e-25
BC017172-1|AAH17172.1|  125|Homo sapiens hypothetical protein HS...   113   9e-25
AF110774-1|AAF14857.1|  125|Homo sapiens adrenal gland protein A...   113   9e-25
BC029482-1|AAH29482.1|  125|Homo sapiens hypothetical protein HS...   111   6e-24
BC024002-1|AAH24002.1|  324|Homo sapiens fibronectin type III do...    32   4.5  
AL133054-1|CAB61380.1|  324|Homo sapiens hypothetical protein pr...    32   4.5  

>BC105294-1|AAI05295.1|  125|Homo sapiens hypothetical protein
           HSPC152 protein.
          Length = 125

 Score =  113 bits (273), Expect = 9e-25
 Identities = 56/124 (45%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
 Frame = +2

Query: 239 MXLITHNMLTSKCLKGV-VXGYPLAINAXXIKVKXVDFNPEFISRVIPKLDWEVLWVAAD 415
           M L+THN+L+S  ++GV   G+PL + A  +++  V+FNP F++R+IPK++W     AAD
Sbjct: 1   MKLLTHNLLSSH-VRGVGSRGFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAAD 59

Query: 416 SIGHSDGLPRSLENKYDENEEFLKKAHKXXXXXXXXXGHLTCPESGRQFPISKGIPNMLL 595
           ++     +P+     Y+ENEEFL+  H          G L CPESGR FPIS+GIPNMLL
Sbjct: 60  NLRLIQ-VPKGPVEGYEENEEFLRTMHHLLLEVEVIEGTLQCPESGRMFPISRGIPNMLL 118

Query: 596 NEAE 607
           +E E
Sbjct: 119 SEEE 122


>BC017172-1|AAH17172.1|  125|Homo sapiens hypothetical protein
           HSPC152 protein.
          Length = 125

 Score =  113 bits (273), Expect = 9e-25
 Identities = 56/124 (45%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
 Frame = +2

Query: 239 MXLITHNMLTSKCLKGV-VXGYPLAINAXXIKVKXVDFNPEFISRVIPKLDWEVLWVAAD 415
           M L+THN+L+S  ++GV   G+PL + A  +++  V+FNP F++R+IPK++W     AAD
Sbjct: 1   MKLLTHNLLSSH-VRGVGSRGFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAAD 59

Query: 416 SIGHSDGLPRSLENKYDENEEFLKKAHKXXXXXXXXXGHLTCPESGRQFPISKGIPNMLL 595
           ++     +P+     Y+ENEEFL+  H          G L CPESGR FPIS+GIPNMLL
Sbjct: 60  NLRLIQ-VPKGPVEGYEENEEFLRTMHHLLLEVEVIEGTLQCPESGRMFPISRGIPNMLL 118

Query: 596 NEAE 607
           +E E
Sbjct: 119 SEEE 122


>AF110774-1|AAF14857.1|  125|Homo sapiens adrenal gland protein
           AD-001 protein.
          Length = 125

 Score =  113 bits (273), Expect = 9e-25
 Identities = 56/124 (45%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
 Frame = +2

Query: 239 MXLITHNMLTSKCLKGV-VXGYPLAINAXXIKVKXVDFNPEFISRVIPKLDWEVLWVAAD 415
           M L+THN+L+S  ++GV   G+PL + A  +++  V+FNP F++R+IPK++W     AAD
Sbjct: 1   MKLLTHNLLSSH-VRGVGSRGFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAAD 59

Query: 416 SIGHSDGLPRSLENKYDENEEFLKKAHKXXXXXXXXXGHLTCPESGRQFPISKGIPNMLL 595
           ++     +P+     Y+ENEEFL+  H          G L CPESGR FPIS+GIPNMLL
Sbjct: 60  NLRLIQ-VPKGPVEGYEENEEFLRTMHHLLLEVEVIEGTLQCPESGRMFPISRGIPNMLL 118

Query: 596 NEAE 607
           +E E
Sbjct: 119 SEEE 122


>BC029482-1|AAH29482.1|  125|Homo sapiens hypothetical protein
           HSPC152 protein.
          Length = 125

 Score =  111 bits (266), Expect = 6e-24
 Identities = 55/124 (44%), Positives = 79/124 (63%), Gaps = 1/124 (0%)
 Frame = +2

Query: 239 MXLITHNMLTSKCLKGV-VXGYPLAINAXXIKVKXVDFNPEFISRVIPKLDWEVLWVAAD 415
           M L+THN+L+S  ++GV   G+PL + A  +++  V+FNP F++R+IPK++W     AAD
Sbjct: 1   MKLLTHNLLSSH-VRGVGSRGFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAAD 59

Query: 416 SIGHSDGLPRSLENKYDENEEFLKKAHKXXXXXXXXXGHLTCPESGRQFPISKGIPNMLL 595
           ++     +P+     Y+ENEEFL+  H          G L CPESGR FPIS+GIPNMLL
Sbjct: 60  NLRLIQ-VPKGPVEGYEENEEFLRTMHHLLLEVEVIEGTLQCPESGRMFPISRGIPNMLL 118

Query: 596 NEAE 607
           +  E
Sbjct: 119 SGEE 122


>BC024002-1|AAH24002.1|  324|Homo sapiens fibronectin type III
           domain containing 8 protein.
          Length = 324

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = -2

Query: 624 IVNYRTSASFNSILGIPLEIGNCLPDSGQVKCPSSTSTSNKTL*AFFKNSSFSSYLFSKD 445
           +VN+    + N +  +P+E  +C  D   +   SST  +   L     NSSF + +   +
Sbjct: 58  LVNFLEDDTINLLKPLPVEDSDCSSDETSISAFSSTLLNPIKLAVTQPNSSFFAGMLEGE 117

Query: 444 LGRPSLWPMLSAA 406
           L + S  PM   A
Sbjct: 118 LNKLSFSPMAKNA 130


>AL133054-1|CAB61380.1|  324|Homo sapiens hypothetical protein
           protein.
          Length = 324

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = -2

Query: 624 IVNYRTSASFNSILGIPLEIGNCLPDSGQVKCPSSTSTSNKTL*AFFKNSSFSSYLFSKD 445
           +VN+    + N +  +P+E  +C  D   +   SST  +   L     NSSF + +   +
Sbjct: 58  LVNFLEDDTINLLKPLPVEDSDCSSDETSISAFSSTLLNPIKLAVTQPNSSFFAGMLEGE 117

Query: 444 LGRPSLWPMLSAA 406
           L + S  PM   A
Sbjct: 118 LNKLSFSPMAKNA 130


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,231,695
Number of Sequences: 237096
Number of extensions: 2155503
Number of successful extensions: 7900
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7887
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16183591620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)