Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_L20
         (1162 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81462-1|CAB03840.1|  125|Caenorhabditis elegans Hypothetical pr...    85   1e-16
AL032652-8|CAA21706.1|  277|Caenorhabditis elegans Hypothetical ...    31   2.1  
AF106577-8|AAC78184.1|  288|Caenorhabditis elegans Hypothetical ...    30   3.6  
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr...    29   6.3  

>Z81462-1|CAB03840.1|  125|Caenorhabditis elegans Hypothetical
           protein C04H5.1 protein.
          Length = 125

 Score = 84.6 bits (200), Expect = 1e-16
 Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
 Frame = +2

Query: 239 MXLITHNMLTSKCLKGVVXGYPLAINAXXIKVKXVDFNPEFISRVIPKLDWEVLWVAADS 418
           M L  HN ++S+ LK V  GYPL +       K ++F+ +    ++ ++ +E L VAA +
Sbjct: 1   MKLFVHNFMSSRFLKNVTVGYPLNLVVKQFVEKDIEFDRDNTIVMLDRIQYEALIVAAAA 60

Query: 419 IGHSDGLPRSLENKYDE-NEEFLKKAHKXXXXXXXXXGHLTCPESGRQFPISKGIPNMLL 595
           +  SD +PR    K+DE  +E L+  H          G L CPE+   FPI  GIPNML 
Sbjct: 61  VNQSDRIPREKPEKWDELTDEQLRVFHHLLMNIDVIDGELICPETKTVFPIRDGIPNMLK 120

Query: 596 NEAE 607
            +AE
Sbjct: 121 VDAE 124


>AL032652-8|CAA21706.1|  277|Caenorhabditis elegans Hypothetical
           protein Y63D3A.10 protein.
          Length = 277

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 245 LITHNMLTSKCLKGVVXGYPLAINAXXIKVKXVDFNPEFISRVIPKLDWEVLWV 406
           LI + +    C+  V+  Y ++     +KV     NP+ + ++I KLD +VLW+
Sbjct: 94  LIAYKLDIRDCINHVLEVYKIS-KLHTLKVIGAINNPQNLLKIIGKLDLKVLWI 146


>AF106577-8|AAC78184.1|  288|Caenorhabditis elegans Hypothetical
           protein F46F5.4 protein.
          Length = 288

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 580 NSFRNWELSSRFWTSQVSLFNFHL*QNFMSFLQKL 476
           N F NWE++S F+ ++ + F  +L  NF  +  KL
Sbjct: 75  NRFCNWEIASGFYLARNTPFAINLLNNFADYESKL 109


>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical protein
            T04G9.1 protein.
          Length = 1610

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 299  YPLAINAXXIKV-KXVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSL 451
            Y L +    +K+ + +D NP    ++ PK+D   L++AADS+  + G  R L
Sbjct: 1161 YLLLLAEVKVKLFEEIDVNPRVREQLRPKIDLIDLYMAADSMNVAKGRLRRL 1212


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,939,141
Number of Sequences: 27780
Number of extensions: 341341
Number of successful extensions: 922
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3161640774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)