Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_L19
         (1188 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr...    32   4.7  
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr...    32   4.7  

>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
            protein.
          Length = 4262

 Score = 31.9 bits (69), Expect = 4.7
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = +2

Query: 695  TGIELCNVPGPSNRIYTEPCTSSQTQVEPTRRSQAFDLDYDSVEDGVPTSSPESIVTPLS 874
            T I +  +P  S+   T   T+  T +  T  ++A      +    +PTS+P    TPL+
Sbjct: 2754 TSILVSTLPVASSEASTVSTTAVDTSIPVTTSTEASSSPTTAEVTSMPTSTPSETSTPLT 2813

Query: 875  --PVQYEPTTQS 904
              PV + P   S
Sbjct: 2814 SMPVNHTPVASS 2825


>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
            protein.
          Length = 4493

 Score = 31.9 bits (69), Expect = 4.7
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = +2

Query: 695  TGIELCNVPGPSNRIYTEPCTSSQTQVEPTRRSQAFDLDYDSVEDGVPTSSPESIVTPLS 874
            T I +  +P  S+   T   T+  T +  T  ++A      +    +PTS+P    TPL+
Sbjct: 2754 TSILVSTLPVASSEASTVSTTAVDTSIPVTTSTEASSSPTTAEVTSMPTSTPSETSTPLT 2813

Query: 875  --PVQYEPTTQS 904
              PV + P   S
Sbjct: 2814 SMPVNHTPVASS 2825


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,067,398
Number of Sequences: 237096
Number of extensions: 2696089
Number of successful extensions: 6134
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6131
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16679007690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)