Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_L19
         (1188 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49911-10|CAA90134.1|  471|Caenorhabditis elegans Hypothetical p...    33   0.52 
Z49909-18|CAA90117.1|  471|Caenorhabditis elegans Hypothetical p...    33   0.52 
Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical pr...    31   1.6  
AF047653-3|AAC04460.2|  378|Caenorhabditis elegans Hypothetical ...    30   2.8  
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ...    29   4.9  
Z81112-5|CAB03276.1|  245|Caenorhabditis elegans Hypothetical pr...    29   8.5  
Z81027-4|CAB02689.1|  245|Caenorhabditis elegans Hypothetical pr...    29   8.5  

>Z49911-10|CAA90134.1|  471|Caenorhabditis elegans Hypothetical
           protein C14A4.13 protein.
          Length = 471

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = +2

Query: 704 ELCNVPGPSNRIYTEPCTSSQTQVEPTRRSQAFDLDYDSVEDGVPTSSPESIVTPLSP 877
           EL ++P P  ++YTE       + EP R       D   +E   P  +P+ +  P+ P
Sbjct: 333 ELLDLPKPGGKVYTERDFPQPGEQEPMRDESVSKSDDTIIEKEGPPPAPKPVSKPVPP 390


>Z49909-18|CAA90117.1|  471|Caenorhabditis elegans Hypothetical
           protein C14A4.13 protein.
          Length = 471

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = +2

Query: 704 ELCNVPGPSNRIYTEPCTSSQTQVEPTRRSQAFDLDYDSVEDGVPTSSPESIVTPLSP 877
           EL ++P P  ++YTE       + EP R       D   +E   P  +P+ +  P+ P
Sbjct: 333 ELLDLPKPGGKVYTERDFPQPGEQEPMRDESVSKSDDTIIEKEGPPPAPKPVSKPVPP 390


>Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical
           protein B0393.4 protein.
          Length = 803

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = +2

Query: 713 NVPGPSNR---IYTEPCTSSQTQVEPTRRSQAFDLDY-DSVEDGVPTSSPESIVTPLSPV 880
           +VP  SNR    Y +P  +S  QV     +        + V + VP S+PE I  PL  V
Sbjct: 82  SVPKRSNRKKLTYKQPPRNSTPQVPKVAVTLPVPEPVPEPVPEPVPESTPEPISEPLPVV 141

Query: 881 QYEPTTQS 904
           Q EP + S
Sbjct: 142 QEEPASDS 149


>AF047653-3|AAC04460.2|  378|Caenorhabditis elegans Hypothetical
           protein W02F12.4a protein.
          Length = 378

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 592 AKRLTLITWKLPAPSSSEPIAACIPITFNTLXSNP 488
           A+R   ITW +  P S +P+A  IP   +T   NP
Sbjct: 139 AERQKDITWNIENPGSEKPLAKFIPTCTHTRQINP 173


>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
           protein M01E10.2 protein.
          Length = 1286

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 23/77 (29%), Positives = 30/77 (38%)
 Frame = +2

Query: 743 TEPCTSSQTQVEPTRRSQAFDLDYDSVEDGVPTSSPESIVTPLSPVQYEPTTQSHRERSX 922
           T P T +             D DY+S ED   + +     TP  P Q  PTT + R  + 
Sbjct: 244 TPPTTRTPPTTSQPAEFNIDDDDYESSEDISESHTTPPTQTP--PTQTPPTTTTTRRVTV 301

Query: 923 RVRSPSQICARLTQAER 973
            V SP+    R T   R
Sbjct: 302 VVTSPTTTTPRRTITTR 318



 Score = 29.5 bits (63), Expect = 4.9
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
 Frame = +2

Query: 638 QEFQDIVVSQPWTAAQSGGTGIELCNVPG-PSNRIYTEPCTSSQTQVEPTRRSQAFDLDY 814
           ++++  V S+P     +  T +   N+P  PS+     P T S   V  +     F LD 
Sbjct: 484 EDYESTVTSKPVIMFTTESTVVH--NLPTKPSSAPTLHPSTFSPPLVTSSENPFTFTLDT 541

Query: 815 DSVEDGVPTSSPESIVTPLSP 877
                  P +SP S VT  +P
Sbjct: 542 TPTSTVTPMTSPPSTVTETTP 562


>Z81112-5|CAB03276.1|  245|Caenorhabditis elegans Hypothetical
           protein AH10.2 protein.
          Length = 245

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +3

Query: 588 LAHLKYIVNFYLICLSFRNFRILSFHSPGLQHNLEVQVLNCVMCLDLPIEYTQN 749
           +  LK   +F  I L+  N R LSFH    Q  LE+   N V  L   +EY  N
Sbjct: 35  ILQLKTNTSFQEIQLAMGNPRTLSFHPKDHQETLEISFSNNVSDL-TTVEYHMN 87


>Z81027-4|CAB02689.1|  245|Caenorhabditis elegans Hypothetical
           protein AH10.2 protein.
          Length = 245

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +3

Query: 588 LAHLKYIVNFYLICLSFRNFRILSFHSPGLQHNLEVQVLNCVMCLDLPIEYTQN 749
           +  LK   +F  I L+  N R LSFH    Q  LE+   N V  L   +EY  N
Sbjct: 35  ILQLKTNTSFQEIQLAMGNPRTLSFHPKDHQETLEISFSNNVSDL-TTVEYHMN 87


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,429,397
Number of Sequences: 27780
Number of extensions: 406971
Number of successful extensions: 1133
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3255550896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)