Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_L18
         (1159 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    32   0.009
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    27   0.36 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    27   0.36 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    25   0.82 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    24   2.5  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   7.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   7.7  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 31.9 bits (69), Expect = 0.009
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +3

Query: 603 KPFKQTSGKVVGAYFVEWGVYPR---KFPVDRVPVPNLTHLLYGFIPICGGD 749
           +P+  T  ++V  YF  W +Y     ++  + +PV   TH++Y FI +   D
Sbjct: 15  QPYDATPARIV-CYFSNWAIYRPGIGRYAQEDLPVDLCTHIVYSFIGVNDAD 65


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 26.6 bits (56), Expect = 0.36
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 879 LSSWNEPYKGNFGQLMXLKQANXGLRSYL 965
           +  W +  KGNF ++  LK+ N  L++ +
Sbjct: 72  IDEWGDIEKGNFAEVEALKEINPNLKTII 100


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 26.6 bits (56), Expect = 0.36
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +3

Query: 405 DKKEVWSG-AGSATSAAFK-VKKGGRYQMQVELCNSDGCSSSEGVE 536
           +K E++    G  T++ F+ VK G  Y +    C+S GCS     E
Sbjct: 317 NKTEIFLNITGDKTNSVFEHVKLGSLYHISFMACSSAGCSQKVAEE 362


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 25.4 bits (53), Expect = 0.82
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +3

Query: 618 TSGKVVGAYFVEWGVYP---RKFPVDRVPVPNLTHLLYGFI 731
           T+ KVV  Y+  W  Y     +F VD +     TH++Y F+
Sbjct: 22  TTDKVV-CYWGTWSTYRWGNGRFTVDHIDPYLCTHIIYSFV 61


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = +3

Query: 621 SGKVVGAYFVEWGVYPR---KFPVDRVPVPNLTHLLYGFIPICGGDGINDSLKEIEGSFQ 791
           + KVV  Y   W  Y     KF V+ +     THL+Y F+    G G +  +K +E +  
Sbjct: 19  TNKVV-CYHGIWSTYRLNNGKFTVEDIDPTLCTHLIYSFV----GLGDDSRIKHLEPNLD 73

Query: 792 ALQ 800
             Q
Sbjct: 74  VNQ 76


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 333 DAADVSVNWNVWTGDAA 383
           D +   V WN W G+A+
Sbjct: 104 DESKCDVFWNCWNGEAS 120


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 333 DAADVSVNWNVWTGDAA 383
           D +   V WN W G+A+
Sbjct: 104 DESKCDVFWNCWNGEAS 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,381
Number of Sequences: 336
Number of extensions: 4158
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33712719
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)