Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_L18
         (1159 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       29   0.34 
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    28   0.45 
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   3.2  
AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    24   7.3  
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    24   7.3  
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    24   7.3  
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    24   7.3  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 28.7 bits (61), Expect = 0.34
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
 Frame = +3

Query: 603 KPFKQTS--GKVVGAYFVEWGVYPR---KFPVDRVPVPNLTHLLYGFIPI 737
           +P K  S  GK V  Y   W VY     ++ ++ +     THL+YGF  I
Sbjct: 21  EPHKAASAEGKKVVCYVGTWAVYRPGNGRYDIEHIDPSLCTHLMYGFFGI 70


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 28.3 bits (60), Expect = 0.45
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = -3

Query: 635 HHFSRSLLEGLIFLTNRIIERPQM-ATISVSYYDFDALARAASV*VAELDLHLVSSALLH 459
           HHF R+ LE + F T  IIE  +    I+++    D +  + S+ + +L   L    +L 
Sbjct: 389 HHFVRAALEAVCFQTRDIIEAMKKDCGINLNKLHTDGIMASNSL-LMQLQADLSGIPVLR 447

Query: 458 FESGRCGAAGTA 423
            E     A GTA
Sbjct: 448 TEVHEPAALGTA 459


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 25.4 bits (53), Expect = 3.2
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -1

Query: 574 GLKWLPSVSATTIST-PSLELHPSELQSSTCIWY-LPPFFTL 455
           G  W  + + +T+ T   L+L+P+   S T  WY L P + L
Sbjct: 469 GSAWSVNYNTSTVMTNKELQLNPTTDYSETVYWYGLDPLWML 510


>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.2 bits (50), Expect = 7.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 669 RKFPVDRVPVPNLTHLLYGFIPI 737
           RK  V+ VP P L   + GF P+
Sbjct: 147 RKLAVNMVPFPRLHFFMPGFAPL 169


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.2 bits (50), Expect = 7.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 669 RKFPVDRVPVPNLTHLLYGFIPI 737
           RK  V+ VP P L   + GF P+
Sbjct: 147 RKLAVNMVPFPRLHFFMPGFAPL 169


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.2 bits (50), Expect = 7.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 669 RKFPVDRVPVPNLTHLLYGFIPI 737
           RK  V+ VP P L   + GF P+
Sbjct: 147 RKLAVNMVPFPRLHFFMPGFAPL 169


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 24.2 bits (50), Expect = 7.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 669 RKFPVDRVPVPNLTHLLYGFIPI 737
           RK  V+ VP P L   + GF P+
Sbjct: 147 RKLAVNMVPFPRLHFFMPGFAPL 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 958,319
Number of Sequences: 2352
Number of extensions: 17214
Number of successful extensions: 43
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 130390293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)