Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_L18
         (1159 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113343-1|AAM29348.1| 1307|Drosophila melanogaster GH12701p pro...    29   9.2  
AY058648-1|AAL13877.1|  846|Drosophila melanogaster LD35132p pro...    29   9.2  
AE014297-2580|AAF55594.2|  846|Drosophila melanogaster CG7719-PA...    29   9.2  
AE014296-3443|AAF51654.2| 1307|Drosophila melanogaster CG32432-P...    29   9.2  

>AY113343-1|AAM29348.1| 1307|Drosophila melanogaster GH12701p
           protein.
          Length = 1307

 Score = 29.5 bits (63), Expect = 9.2
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +1

Query: 373 ATRPTSPESCSIRRKSGAVPAAPHRPLSK*R---RAEDTRCRSSSATQT 510
           AT       C +RR +  +P+  HR ++K R       T+CR+  AT+T
Sbjct: 49  ATSRLRETRCKLRRHNKCLPSEQHRNVAKMRLKVSTSATQCRAIKATET 97


>AY058648-1|AAL13877.1|  846|Drosophila melanogaster LD35132p
           protein.
          Length = 846

 Score = 29.5 bits (63), Expect = 9.2
 Identities = 27/106 (25%), Positives = 46/106 (43%)
 Frame = +3

Query: 273 FAXVEVNQAATAYNQLVTKKDAADVSVNWNVWTGDAADKSRVLLDKKEVWSGAGSATSAA 452
           F+  E N++ T  +   T  +  D S + +  T ++AD S+       + S  G+A   A
Sbjct: 310 FSAEEANESIT--HTCTTNVNPQDSSSSCSFHTCNSADLSKC---SPPLESKDGAAAGNA 364

Query: 453 FKVKKGGRYQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSI 590
              K+   + +    C   GC  +E     +A  DG HL  +D +I
Sbjct: 365 IPSKRRVEFVLDAAPCQ--GCKLAEQDSSNMATNDGKHLPKIDNAI 408


>AE014297-2580|AAF55594.2|  846|Drosophila melanogaster CG7719-PA
           protein.
          Length = 846

 Score = 29.5 bits (63), Expect = 9.2
 Identities = 27/106 (25%), Positives = 46/106 (43%)
 Frame = +3

Query: 273 FAXVEVNQAATAYNQLVTKKDAADVSVNWNVWTGDAADKSRVLLDKKEVWSGAGSATSAA 452
           F+  E N++ T  +   T  +  D S + +  T ++AD S+       + S  G+A   A
Sbjct: 310 FSAEEANESIT--HTCTTNVNPQDSSSSCSFHTCNSADLSKC---SPPLESKDGAAAGNA 364

Query: 453 FKVKKGGRYQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSI 590
              K+   + +    C   GC  +E     +A  DG HL  +D +I
Sbjct: 365 IPSKRRVEFVLDAAPCQ--GCKLAEQDSSNMATNDGKHLPKIDNAI 408


>AE014296-3443|AAF51654.2| 1307|Drosophila melanogaster CG32432-PA
           protein.
          Length = 1307

 Score = 29.5 bits (63), Expect = 9.2
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +1

Query: 373 ATRPTSPESCSIRRKSGAVPAAPHRPLSK*R---RAEDTRCRSSSATQT 510
           AT       C +RR +  +P+  HR ++K R       T+CR+  AT+T
Sbjct: 49  ATSRLRETRCKLRRHNKCLPSEQHRNVAKMRLKVSTSATQCRAIKATET 97


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,603,286
Number of Sequences: 53049
Number of extensions: 813445
Number of successful extensions: 2117
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2117
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6107420046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)