Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_L14
(1164 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 278 2e-73
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 254 3e-66
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 230 5e-59
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 215 2e-54
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 188 3e-46
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 180 5e-44
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 176 1e-42
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 131 4e-29
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 128 3e-28
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 119 2e-25
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 95 3e-18
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 94 5e-18
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 83 1e-14
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 76 2e-12
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 74 8e-12
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 61 5e-08
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 58 3e-07
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 43 0.017
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 41 0.070
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 38 0.65
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 37 1.1
UniRef50_Q3SAD8 Cluster: Putative uncharacterized protein; n=1; ... 35 3.5
UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containi... 35 4.6
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 35 4.6
UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1; ... 34 8.1
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 34 8.1
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 278 bits (681), Expect = 2e-73
Identities = 133/194 (68%), Positives = 153/194 (78%), Gaps = 1/194 (0%)
Frame = +3
Query: 105 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 281
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 282 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 461
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 462 AIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKE 641
I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCGRADGY+LEGKE
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKE 194
Query: 642 LEFYLRKIKSKRAK 683
LEFYLRKIK+++ K
Sbjct: 195 LEFYLRKIKARKGK 208
Score = 81.4 bits (192), Expect = 4e-14
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +2
Query: 62 GLSRDHWHXRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 193
G+SRD+WH RR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 2 GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 254 bits (622), Expect = 3e-66
Identities = 117/162 (72%), Positives = 139/162 (85%), Gaps = 2/162 (1%)
Frame = +3
Query: 198 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 377
R+RGGNTK RALRL+TGNF+W SE RKTRI DVVYNASNNELVRTKTLVKN+IVV+DA
Sbjct: 47 RTRGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDA 106
Query: 378 TPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGALEE 551
TPFRQWYE+HY LPLGRK+ K + E+ ++ KKRS+K +KYL RQ+ KVE ALE+
Sbjct: 107 TPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALED 166
Query: 552 QFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 677
QF +GR+LAC++SRPGQCGR+DGYILEGKELEFYL+KIKSK+
Sbjct: 167 QFTSGRILACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK 208
Score = 70.9 bits (166), Expect = 6e-11
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +2
Query: 62 GLSRDHWHXRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH 190
G+SRD H RRATGGKR +RKKRK+ELGRPAANT+LG R+H
Sbjct: 2 GISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVH 44
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 230 bits (563), Expect = 5e-59
Identities = 111/157 (70%), Positives = 128/157 (81%)
Frame = +3
Query: 213 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 392
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQ
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQ 91
Query: 393 WYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRL 572
WYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF G+L
Sbjct: 92 WYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKL 151
Query: 573 LACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 683
LAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 152 LACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188
Score = 81.4 bits (192), Expect = 4e-14
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +2
Query: 62 GLSRDHWHXRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 193
G+SRD+WH RR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 2 GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 215 bits (525), Expect = 2e-54
Identities = 105/170 (61%), Positives = 128/170 (75%), Gaps = 8/170 (4%)
Frame = +3
Query: 198 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 377
R RGGN K+RALRLDTGN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+AIV VDA
Sbjct: 48 RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDA 107
Query: 378 TPFRQWYESHYTLPLGRKK--------GAKLTEAEEAIINKKRSQKTARKYLARQRLAKV 533
PF+QWY +HY + +GRKK A+ E E A K+S RK R+ +
Sbjct: 108 APFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTL 167
Query: 534 EGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 683
+ +EEQF +GRLLAC++SRPGQCGRADGYILEGKELEFY++K++ K+ K
Sbjct: 168 DPHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
Score = 57.2 bits (132), Expect = 8e-07
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +2
Query: 62 GLSRDHWHXRRATGGKRAPIRKKRKYELGRPAANTRLGPQR 184
G+SRD H RRATGGK+ RKKRKYELGR ANT+L +
Sbjct: 2 GISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNK 42
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 188 bits (457), Expect = 3e-46
Identities = 92/135 (68%), Positives = 103/135 (76%), Gaps = 1/135 (0%)
Frame = +3
Query: 105 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 281
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 282 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 461
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 462 AIINKKRSQKTARKY 506
I+NKKRS+K +KY
Sbjct: 135 EILNKKRSKKIQKKY 149
Score = 81.4 bits (192), Expect = 4e-14
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +2
Query: 62 GLSRDHWHXRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 193
G+SRD+WH RR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 2 GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 180 bits (439), Expect = 5e-44
Identities = 94/160 (58%), Positives = 116/160 (72%)
Frame = +3
Query: 198 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 377
R RGGN K+RALRLD+GNFSWGS+ TRKTR++DVVYNAS+NELVRTKTLVKNAIV VD
Sbjct: 47 RCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDP 106
Query: 378 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 557
TPF+ W+++HY L LG K +E +A S+K A A V L +QF
Sbjct: 107 TPFKLWFKTHYGLELG-----KSSEDPQA------SEKVA---------ALVPRTLLDQF 146
Query: 558 HTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 677
+GRLLAC++SRPGQCGR DGY+LEG+EL FY R++ K+
Sbjct: 147 SSGRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDKKK 186
Score = 55.6 bits (128), Expect = 2e-06
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = +2
Query: 62 GLSRDHWHXRRATGGKRAPIRKKRKYELGRPAANTRLGPQRI 187
G+SRD H RR TGG+ +KKRKYELGRP++NT+LG + +
Sbjct: 2 GISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGSKLV 43
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 176 bits (428), Expect = 1e-42
Identities = 91/176 (51%), Positives = 118/176 (67%), Gaps = 13/176 (7%)
Frame = +3
Query: 189 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVV 368
+P R+RGGN K RALRLDTGNF+W SE + R++DVVYNA++NELVRTKTLVKN IV
Sbjct: 44 SPVRARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVA 103
Query: 369 VDATPFRQWYESHYTLPL-GRKKGAKLTEAEE--------AIINK----KRSQKTARKYL 509
VDA PF++WY HY + L KK K A E A +K K S K R++
Sbjct: 104 VDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAAADKYDVNKASPKLQREWT 163
Query: 510 ARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 677
R+R +VE A+ +Q GR+LA + SRPGQ GRADG +LEG EL+FYL++++ K+
Sbjct: 164 RRRRNHRVEKAIADQLREGRVLARITSRPGQSGRADGILLEGAELQFYLKRLEKKK 219
Score = 46.0 bits (104), Expect = 0.002
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +2
Query: 62 GLSRDHWHXRRATGGKRAPIRKKRKYELGRPAANTRLGPQRI 187
G+ R H R+ TGGK RK+ K ELGR ANTRLG +R+
Sbjct: 2 GIVRSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGARRV 43
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 131 bits (316), Expect = 4e-29
Identities = 79/190 (41%), Positives = 111/190 (58%), Gaps = 30/190 (15%)
Frame = +3
Query: 198 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 377
R R G K RALRL+ GNFSW S+ T+ T+I++VVYNAS+N+ VRT TLVK AI+ +D
Sbjct: 47 RCRYGIIKRRALRLENGNFSWASQSITKGTKILNVVYNASDNDFVRTNTLVKGAIIEIDP 106
Query: 378 TPFRQWYESHYTLPLGRKKGAKLTEA-----EEAII------NKKRS------------- 485
PFR W+ Y + K E+ E+ ++ NK+++
Sbjct: 107 APFRLWFLKFYGKDIASTDYYKSLESATFKTEKKVVVPKEEENKEKTIAQQIAETQVALM 166
Query: 486 --QKTARKYLARQ----RLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELE 647
KT +K A++ + K + AL E F +GR+LAC++SRPGQ G +GYILEGKEL+
Sbjct: 167 NPSKTMQKKYAKKLEVLKNMKFDEALLEGFQSGRVLACISSRPGQTGSVEGYILEGKELD 226
Query: 648 FYLRKIKSKR 677
FY +KI K+
Sbjct: 227 FYSKKISDKK 236
Score = 55.2 bits (127), Expect = 3e-06
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = +2
Query: 62 GLSRDHWHXRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH 190
G++RD H RRATGGK+ ++KK+K +GR ANTRLG R+H
Sbjct: 2 GITRDSRHKRRATGGKKNSMQKKKKNTMGRQPANTRLGAIRVH 44
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 128 bits (309), Expect = 3e-28
Identities = 58/88 (65%), Positives = 72/88 (81%)
Frame = +3
Query: 198 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 377
R RGGNTK+RALR DT N+SWGSE TRKTRI+DVVY A+NNELVRT+TLVK+AIV VDA
Sbjct: 145 RVRGGNTKWRALRFDTCNYSWGSEALTRKTRILDVVYIATNNELVRTQTLVKSAIVQVDA 204
Query: 378 TPFRQWYESHYTLPLGRKKGAKLTEAEE 461
PF+QWY +HY + +GRKK + + ++
Sbjct: 205 APFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 119 bits (286), Expect = 2e-25
Identities = 62/120 (51%), Positives = 83/120 (69%), Gaps = 9/120 (7%)
Frame = +3
Query: 351 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 509
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 510 ARQRL--AKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 683
RQ L A VE +L+E+F TGRLLAC++S+PGQ GRADGY+ EGKELEF+ +K+K+K+AK
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKAK 120
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 95.1 bits (226), Expect = 3e-18
Identities = 66/159 (41%), Positives = 87/159 (54%)
Frame = +3
Query: 198 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 377
R RGG K RAL L GNFS+ S T K +I+ V +N S+NELVRT TL K +IV +D
Sbjct: 47 RVRGGGVKTRALFLSYGNFSFVSIQRTFKAKILSVAFNESSNELVRTNTLTKGSIVYLDI 106
Query: 378 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 557
+ TL K+ AE+ I NK L +Q
Sbjct: 107 AKTL----IYNTLIRNLNSNPKI--AEDTISNK---------------------ILIDQI 139
Query: 558 HTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 674
+G++LA + SRPGQ GRADGYILEG+EL+++L+KI+ K
Sbjct: 140 LSGKILARICSRPGQSGRADGYILEGQELDYFLKKIQKK 178
Score = 39.9 bits (89), Expect = 0.12
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +2
Query: 62 GLSRDHWHXRRATGGKRAPIRKKRKYELGRPAANTRLG 175
G++R+ H R++TGG ++ RKKR + GR +NT++G
Sbjct: 2 GINREGLHKRKSTGGLKSCWRKKRNHAKGRQPSNTKIG 39
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 94.3 bits (224), Expect = 5e-18
Identities = 46/86 (53%), Positives = 55/86 (63%)
Frame = +3
Query: 426 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQC 605
R+ + T EE ++NKKRS+KT +KY R AC+ASRPGQC
Sbjct: 64 RRAPSWYTPEEEEVLNKKRSKKTQKKYDERXXXXXXXXXXXXXXXXXXXXACIASRPGQC 123
Query: 606 GRADGYILEGKELEFYLRKIKSKRAK 683
GRADGYILEGKELEFYLRKIK+K+ K
Sbjct: 124 GRADGYILEGKELEFYLRKIKAKKGK 149
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 83.0 bits (196), Expect = 1e-14
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = +3
Query: 198 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 377
R RGGN K RALRL G+F+WGS + K RI+ VVYN+++NELVRT TLVK +V +D+
Sbjct: 56 RCRGGNIKRRALRLSHGSFAWGSADISHKARILQVVYNSTSNELVRTNTLVKGCVVQIDS 115
Query: 378 TPFR 389
PF+
Sbjct: 116 APFK 119
Score = 50.8 bits (116), Expect = 7e-05
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 549 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 674
+Q +LA ++SRPGQ G ADGYILEG EL FY +K+ K
Sbjct: 133 DQIRGDHILARISSRPGQVGTADGYILEGPELLFYQKKLAPK 174
Score = 37.9 bits (84), Expect = 0.50
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2
Query: 62 GLSRDHWHXRRATGGKRAPIRKKRKYELGRPAANTRL 172
G++ D + R TG + KKRKY LGR ANT+L
Sbjct: 2 GITHDKMYKRSKTGAVQGKWHKKRKYNLGRQPANTKL 38
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 75.8 bits (178), Expect = 2e-12
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +3
Query: 189 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVV 368
TP R RGGN KY+ALRLD G+F + + R +++ VVY+ S+NELVRT TL K+++V
Sbjct: 44 TPVRVRGGNRKYKALRLDMGHFKFITTGKFRMAKLLQVVYHPSSNELVRTNTLTKSSVVK 103
Query: 369 VDATPFR 389
+ A PF+
Sbjct: 104 ISAEPFK 110
Score = 52.8 bits (121), Expect = 2e-05
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +3
Query: 531 VEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 674
V+ +L E F G L A + SRPGQ G A G++L+G EL+FY K K
Sbjct: 120 VDPSLHESFEKGHLYAIITSRPGQVGMAQGHVLQGDELKFYADKFNKK 167
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 73.7 bits (173), Expect = 8e-12
Identities = 41/82 (50%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 426 RKKGAKLTEAEEAIINKKRSQKTARKYLAR-QRLAKVEGALEEQFHTGRLLACVASRPGQ 602
R + + E I K R +K AR KVE ALE+QF GRL A V+SRPGQ
Sbjct: 59 RLESGNFSWGSEGIARKVRVIVVEKKQAARFAAQGKVEPALEKQFEAGRLYAVVSSRPGQ 118
Query: 603 CGRADGYILEGKELEFYLRKIK 668
GR DGYILEG+EL FY R I+
Sbjct: 119 SGRVDGYILEGEELAFYQRAIR 140
Score = 60.5 bits (140), Expect = 8e-08
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = +2
Query: 62 GLSRDHWHXRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH 190
G+SRD H R ATG KR+ RKKR +E GR ANTR+GP+RIH
Sbjct: 2 GISRDSRHKRSATGAKRSHYRKKRAFEKGRQPANTRIGPKRIH 44
Score = 53.6 bits (123), Expect = 9e-06
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +3
Query: 198 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 302
R+RGGN K+R LRL++GNFSWGSE RK R+I V
Sbjct: 47 RTRGGNQKFRGLRLESGNFSWGSEGIARKVRVIVV 81
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 61.3 bits (142), Expect = 5e-08
Identities = 39/92 (42%), Positives = 54/92 (58%)
Frame = +3
Query: 324 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 503
ELVRT+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 504 YLARQRLAKVEGALEEQFHTGRLLACVASRPG 599
RQ+ K++ +EEQF +GRLLA ++S PG
Sbjct: 79 LEKRQQDHKLDPHIEEQFGSGRLLAAISSYPG 110
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 58.4 bits (135), Expect = 3e-07
Identities = 24/63 (38%), Positives = 42/63 (66%)
Frame = +3
Query: 198 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 377
R RGGN K++A+ L G+F W + ++ ++I+ V+YN +N +LV+ + L K I+ +D+
Sbjct: 41 RVRGGNFKFKAISLGKGSFQWKTMQLSKNSKILSVLYNQANLKLVQKRNLSKGTIIKIDS 100
Query: 378 TPF 386
PF
Sbjct: 101 MPF 103
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 42.7 bits (96), Expect = 0.017
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +3
Query: 198 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 365
R+ GGN K RALRL+ S + T+KT+I V N+++ VR K L K AI+
Sbjct: 45 RTFGGNQKVRALRLEYATVSNPATGETKKTKIEAVEANSADPNYVRRKLLTKGAII 100
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 40.7 bits (91), Expect = 0.070
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +2
Query: 80 WHXR---RATGGKRAPIRKKRKYELGRPAANTRLGPQR 184
WH R + TGG+ P RKKRK+E+G P T +G +R
Sbjct: 4 WHGRSLRKPTGGRIRPHRKKRKFEMGNPPTETLVGEER 41
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 37.5 bits (83), Expect = 0.65
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +3
Query: 264 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 428
SE ST+ T ++ + AS EL KTL K A+ ++D PF W + L R
Sbjct: 174 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 233
Query: 429 KKGAKLTEAEEAIINKKRS 485
G L A+E +INK+ +
Sbjct: 234 MSGDLLNYAQE-LINKQNT 251
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 36.7 bits (81), Expect = 1.1
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 89 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRI 187
R+ +GGK P KR+YELGR TRLG + +
Sbjct: 10 RKPSGGKLRPNHSKRRYELGREPTLTRLGDREL 42
Score = 33.9 bits (74), Expect = 8.1
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 198 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 365
RS GGN+K+ LR D N + +TRK +I V N+++ V+ + + ++
Sbjct: 46 RSYGGNSKFALLRCDYANVYNPKDKTTRKVKINTVKENSADPHYVQRNIMNRGTVI 101
>UniRef50_Q3SAD8 Cluster: Putative uncharacterized protein; n=1;
uncultured euryarchaeote Alv-FOS1|Rep: Putative
uncharacterized protein - uncultured euryarchaeote
Alv-FOS1
Length = 484
Score = 35.1 bits (77), Expect = 3.5
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +3
Query: 168 GSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 347
GS L V+ ++ G + + L N +W + R + + V N + N R T+
Sbjct: 221 GSKLLVNATVKNMGTSPGWANLTFSIDNHTWSNNIYVRSEKTVHVALNVTRNGTFRLTTV 280
Query: 348 VKNAI 362
VKN I
Sbjct: 281 VKNDI 285
>UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containing
protein 6.; n=1; Bos taurus|Rep: Zinc finger CCCH
domain-containing protein 6. - Bos Taurus
Length = 770
Score = 34.7 bits (76), Expect = 4.6
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +3
Query: 72 GITGXSEGPPVGNVRPYARRGSMS*GVPLQTPGSVLS 182
G S GP G + PYA + S S G+PL TPGSVLS
Sbjct: 595 GAVPSSSGP--GALPPYAPKLSSSTGLPLGTPGSVLS 629
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 34.7 bits (76), Expect = 4.6
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 89 RRATGGKRAPIRKKRKYELGRPAANTRLG 175
++ATGG RKKR++ELGR T+LG
Sbjct: 10 KKATGGSLKQSRKKRRFELGREPTLTKLG 38
>UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 738
Score = 33.9 bits (74), Expect = 8.1
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 426 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRP 596
+K+G K E I + RK RQ+ K++ +EEQF +GRLLA ++S P
Sbjct: 273 KKEGEKGDGPVEEI---NKGNHVVRKLEKRQQDHKLDPHIEEQFGSGRLLAAISSYP 326
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 33.9 bits (74), Expect = 8.1
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 89 RRATGGKRAPIRKKRKYELGRPAANTRLGPQ 181
++ +GG+ RKKRK ELGR +NTR+ Q
Sbjct: 10 KKPSGGRIVLARKKRKRELGREPSNTRVAEQ 40
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 841,371,135
Number of Sequences: 1657284
Number of extensions: 14655837
Number of successful extensions: 35712
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 34469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35691
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 115879302255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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