Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_L14
(1164 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 278 3e-74
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 278 3e-74
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 278 3e-74
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 278 3e-74
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 230 6e-60
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 120 1e-26
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 278 bits (681), Expect = 3e-74
Identities = 133/194 (68%), Positives = 153/194 (78%), Gaps = 1/194 (0%)
Frame = +3
Query: 105 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 281
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 282 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 461
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 462 AIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKE 641
I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCGRADGY+LEGKE
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKE 194
Query: 642 LEFYLRKIKSKRAK 683
LEFYLRKIK+++ K
Sbjct: 195 LEFYLRKIKARKGK 208
Score = 81.4 bits (192), Expect = 6e-15
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +2
Query: 62 GLSRDHWHXRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 193
G+SRD+WH RR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 2 GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 278 bits (681), Expect = 3e-74
Identities = 133/194 (68%), Positives = 153/194 (78%), Gaps = 1/194 (0%)
Frame = +3
Query: 105 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 281
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 282 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 461
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 462 AIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKE 641
I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCGRADGY+LEGKE
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKE 194
Query: 642 LEFYLRKIKSKRAK 683
LEFYLRKIK+++ K
Sbjct: 195 LEFYLRKIKARKGK 208
Score = 81.4 bits (192), Expect = 6e-15
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +2
Query: 62 GLSRDHWHXRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 193
G+SRD+WH RR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 2 GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 278 bits (681), Expect = 3e-74
Identities = 133/194 (68%), Positives = 153/194 (78%), Gaps = 1/194 (0%)
Frame = +3
Query: 105 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 281
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 282 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 461
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 462 AIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKE 641
I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCGRADGY+LEGKE
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKE 194
Query: 642 LEFYLRKIKSKRAK 683
LEFYLRKIK+++ K
Sbjct: 195 LEFYLRKIKARKGK 208
Score = 81.4 bits (192), Expect = 6e-15
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +2
Query: 62 GLSRDHWHXRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 193
G+SRD+WH RR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 2 GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 278 bits (681), Expect = 3e-74
Identities = 133/194 (68%), Positives = 153/194 (78%), Gaps = 1/194 (0%)
Frame = +3
Query: 105 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 281
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 282 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 461
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 462 AIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKE 641
I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCGRADGY+LEGKE
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKE 194
Query: 642 LEFYLRKIKSKRAK 683
LEFYLRKIK+++ K
Sbjct: 195 LEFYLRKIKARKGK 208
Score = 81.4 bits (192), Expect = 6e-15
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +2
Query: 62 GLSRDHWHXRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 193
G+SRD+WH RR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 2 GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 230 bits (563), Expect = 6e-60
Identities = 111/157 (70%), Positives = 128/157 (81%)
Frame = +3
Query: 213 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 392
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQ
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQ 91
Query: 393 WYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRL 572
WYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF G+L
Sbjct: 92 WYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKL 151
Query: 573 LACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 683
LAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 152 LACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188
Score = 81.4 bits (192), Expect = 6e-15
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +2
Query: 62 GLSRDHWHXRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHS 193
G+SRD+WH RR TGGKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 2 GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 120 bits (289), Expect = 1e-26
Identities = 54/80 (67%), Positives = 66/80 (82%)
Frame = +3
Query: 444 LTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGY 623
LT EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCGRADGY
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGY 60
Query: 624 ILEGKELEFYLRKIKSKRAK 683
+LEGKELEFYLRKIK+++ K
Sbjct: 61 VLEGKELEFYLRKIKARKGK 80
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,745,120
Number of Sequences: 237096
Number of extensions: 2435851
Number of successful extensions: 4623
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4623
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16238637850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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