Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_L13
         (1159 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0188 + 21036465-21036627,21036735-21036883,21037369-210374...   119   5e-27
07_03_1513 - 27327702-27328604,27329957-27329995,27330413-273306...    29   7.0  

>11_06_0188 +
           21036465-21036627,21036735-21036883,21037369-21037484,
           21037939-21038101
          Length = 196

 Score =  119 bits (286), Expect = 5e-27
 Identities = 54/104 (51%), Positives = 71/104 (68%)
 Frame = +3

Query: 282 QDAGPPEAVIPLGHYGWTVQDDLVCKVDIEDVPYFNAPIFLENKEQIGKIDEIFGNLRDY 461
           +D GPP  V+ +  +    + D V K+  E VPYFNAPI+L+NK QIGK+DEIFG + + 
Sbjct: 45  RDEGPPAEVVEVSTFMHACEGDAVTKLTNEKVPYFNAPIYLQNKTQIGKVDEIFGPINES 104

Query: 462 FVSVKLGENIKAKSFKEGQQFFIDPAKLLPLKRFLPQPPGAKRG 593
             S+K+ E I A S+ EG +F+IDP KLLPL RFLPQP G  +G
Sbjct: 105 LFSIKMLEGIIATSYSEGDKFYIDPMKLLPLSRFLPQPKGQSQG 148


>07_03_1513 - 27327702-27328604,27329957-27329995,27330413-27330692,
            27330772-27330942,27331025-27331857,27331939-27332400,
            27332479-27333212,27333301-27333430
          Length = 1183

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -1

Query: 520  CCPSLKLFALIFSPNLTDTK*SL--RLPNISSILPICSLFSRNIG 392
            C P +KLF    + N    K ++  R+P+  ++ P+C  F  N G
Sbjct: 1019 CIPKVKLFIWRLAHNSLPLKINIKRRVPDAKTLCPVCKRFDENGG 1063


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,981,276
Number of Sequences: 37544
Number of extensions: 247518
Number of successful extensions: 562
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3526513192
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)