Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_L13
         (1159 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3129|AAF46672.1|  237|Drosophila melanogaster CG4038-PA...   163   3e-40
X71975-1|CAA50795.1|  239|Drosophila melanogaster GCR 101 protein.    160   4e-39
AY075501-1|AAO39496.1|  299|Drosophila melanogaster RE52135p pro...    97   3e-20

>AE013599-3129|AAF46672.1|  237|Drosophila melanogaster CG4038-PA
           protein.
          Length = 237

 Score =  163 bits (397), Expect = 3e-40
 Identities = 72/101 (71%), Positives = 85/101 (84%)
 Frame = +3

Query: 285 DAGPPEAVIPLGHYGWTVQDDLVCKVDIEDVPYFNAPIFLENKEQIGKIDEIFGNLRDYF 464
           D GPPE VIPLG+Y ++ Q+DLVCKVDI+DVPYFNAPIFLENKEQ+GKIDEIFG +RDY 
Sbjct: 62  DTGPPERVIPLGNYVYSCQNDLVCKVDIQDVPYFNAPIFLENKEQVGKIDEIFGTVRDYS 121

Query: 465 VSVKLGENIKAKSFKEGQQFFIDPAKLLPLKRFLPQPPGAK 587
           VS+KL +N+ A SFK  Q+ FIDP KLLP+ RFLP+PP  K
Sbjct: 122 VSIKLSDNVYANSFKPNQKLFIDPGKLLPIARFLPKPPQPK 162


>X71975-1|CAA50795.1|  239|Drosophila melanogaster GCR 101 protein.
          Length = 239

 Score =  160 bits (388), Expect = 4e-39
 Identities = 71/101 (70%), Positives = 84/101 (83%)
 Frame = +3

Query: 285 DAGPPEAVIPLGHYGWTVQDDLVCKVDIEDVPYFNAPIFLENKEQIGKIDEIFGNLRDYF 464
           D GPPE VIPLG+Y ++ Q+DLVCKVDI+DVPYFNAPI LENKEQ+GKIDEIFG +RDY 
Sbjct: 60  DTGPPERVIPLGNYVYSCQNDLVCKVDIQDVPYFNAPIVLENKEQVGKIDEIFGTVRDYS 119

Query: 465 VSVKLGENIKAKSFKEGQQFFIDPAKLLPLKRFLPQPPGAK 587
           VS+KL +N+ A SFK  Q+ FIDP KLLP+ RFLP+PP  K
Sbjct: 120 VSIKLSDNVYANSFKPKQKLFIDPGKLLPIARFLPKPPQPK 160


>AY075501-1|AAO39496.1|  299|Drosophila melanogaster RE52135p
           protein.
          Length = 299

 Score = 97.5 bits (232), Expect = 3e-20
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = +3

Query: 285 DAGPPEAVIPLGHYGWTVQDDLVCKVDIEDVPYFNAPIFLENKEQIGKIDEI 440
           D GPPE VIPLG+Y ++ Q+DLVCKVDI+DVPYFNAPIFLENKEQ+GKIDEI
Sbjct: 62  DTGPPERVIPLGNYVYSCQNDLVCKVDIQDVPYFNAPIFLENKEQVGKIDEI 113


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,862,227
Number of Sequences: 53049
Number of extensions: 447275
Number of successful extensions: 947
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6107420046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)