Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_L08
(1168 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 132 1e-29
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 126 1e-27
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 113 1e-23
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 109 2e-22
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 101 4e-20
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 98 4e-19
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 95 3e-18
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 93 9e-18
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 93 1e-17
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 90 1e-16
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 86 1e-15
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 76 2e-12
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 76 2e-12
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 76 2e-12
UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes a... 75 4e-12
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 74 8e-12
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 66 2e-09
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 65 3e-09
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 65 4e-09
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 64 7e-09
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 63 2e-08
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 50 1e-04
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 39 0.28
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 39 0.28
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 37 0.87
UniRef50_Q0U0U7 Cluster: Putative uncharacterized protein; n=1; ... 36 2.7
UniRef50_Q90268 Cluster: Paired box protein Pax-2a; n=68; Verteb... 35 4.6
UniRef50_UPI00015A5EFF Cluster: Uncharacterized protein C4orf8 (... 34 6.1
UniRef50_A4A253 Cluster: ISRm2011-2 transposase protein; n=1; Bl... 34 6.1
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 34 8.1
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 132 bits (320), Expect = 1e-29
Identities = 65/122 (53%), Positives = 81/122 (66%), Gaps = 2/122 (1%)
Frame = +3
Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
+GR +GRKA++VK+ G SD+P HA VAG+ R PRKV +GK +I KRSK+K FVKV
Sbjct: 15 AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74
Query: 315 VNYNHLMPTRYTVDFSFEK--FSXXXXXXXXXXXXXXFNTRVRFEXRYKSGKNKWFFQKL 488
NYNHLMPTRY+VD +K + +V+FE RYK+GKNKWFFQKL
Sbjct: 75 YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134
Query: 489 RF 494
RF
Sbjct: 135 RF 136
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 126 bits (303), Expect = 1e-27
Identities = 61/121 (50%), Positives = 79/121 (65%), Gaps = 2/121 (1%)
Frame = +3
Query: 138 GRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKVV 317
G+ AGRKA+VVK G SD+ HA +AG+ R P KV K +GK +I KR+KLKPF+KVV
Sbjct: 16 GKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKKKIEKRNKLKPFLKVV 75
Query: 318 NYNHLMPTRYTVDFSFEK--FSXXXXXXXXXXXXXXFNTRVRFEXRYKSGKNKWFFQKLR 491
+Y HL+PTRY+VD +F+K + + +FE RYK+GKNKWFF KLR
Sbjct: 76 SYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEERYKTGKNKWFFTKLR 135
Query: 492 F 494
F
Sbjct: 136 F 136
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 113 bits (271), Expect = 1e-23
Identities = 56/121 (46%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
Frame = +3
Query: 138 GRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKVV 317
GR AG+K ++VK G P GHA VAG+ R P KV K+ G ++ KR+K+KPF+KVV
Sbjct: 16 GRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAKKVAKRTKIKPFIKVV 75
Query: 318 NYNHLMPTRYTVDFSFEK--FSXXXXXXXXXXXXXXFNTRVRFEXRYKSGKNKWFFQKLR 491
NYNHL+PTRYT+D K S + FE R+++GKN+WFF KLR
Sbjct: 76 NYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLR 135
Query: 492 F 494
F
Sbjct: 136 F 136
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 109 bits (261), Expect = 2e-22
Identities = 53/121 (43%), Positives = 71/121 (58%), Gaps = 2/121 (1%)
Frame = +3
Query: 138 GRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKVV 317
GR AG+K ++V+ + G P +A VAG+ R P KV +R+GK + KRS++KPF+K+V
Sbjct: 66 GRYAGKKVVIVQPNDTGSKAHPFPYAIVAGIERYPLKVTRRMGKKMVEKRSRIKPFIKIV 125
Query: 318 NYNHLMPTRYTVDFSFEK--FSXXXXXXXXXXXXXXFNTRVRFEXRYKSGKNKWFFQKLR 491
NYNHLMPTRYT++ K S + E RY SGKN+WFF LR
Sbjct: 126 NYNHLMPTRYTLELEGLKGAISQETFKEVSTREDAKKTVKKALEDRYTSGKNRWFFTPLR 185
Query: 492 F 494
F
Sbjct: 186 F 186
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 101 bits (242), Expect = 4e-20
Identities = 45/120 (37%), Positives = 73/120 (60%)
Frame = +3
Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
SGR AG+KA++V+++ + ++P GH+ +AG+ + P+KV + + K I +RS++ F++V
Sbjct: 14 SGRYAGKKAVIVQNTDSKSKERPYGHSLIAGMKKYPKKVVRGMSKRTIQRRSRVGVFLRV 73
Query: 315 VNYNHLMPTRYTVDFSFEKFSXXXXXXXXXXXXXXFNTRVRFEXRYKSGKNKWFFQKLRF 494
VN+ H +PTRY +D S E R F+ RY +G N+WFFQ+LRF
Sbjct: 74 VNHKHFLPTRYNMDLSRELRGRINVSDASKKARSKQLVRKLFQARYNAGSNRWFFQRLRF 133
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 97.9 bits (233), Expect = 4e-19
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Frame = +3
Query: 162 LVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKVVNYNHLMPT 341
+V+K G DK + AG+ R P+KV KR+G +I KRSK+KPFVKV++YNHLMPT
Sbjct: 78 VVIKQFDDGSKDKSFPYIIAAGIERYPQKVTKRMGAKKIAKRSKVKPFVKVISYNHLMPT 137
Query: 342 RYTVDFSFEKFSXXXXXXXXXXXXXXFNTRVR--FEXRYKSGKNKWFFQKLRF 494
RY ++ K + +++ FE +Y SGKNKWFF LRF
Sbjct: 138 RYALELEGLKGAVTQDTFKEPSQREDAKKQIKQIFEEKYTSGKNKWFFTPLRF 190
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 95.1 bits (226), Expect = 3e-18
Identities = 49/124 (39%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Frame = +3
Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
+GR AG+K +V+K +G S++P HAFV G+ R PRKV +GK + +R+++K F K
Sbjct: 15 NGRHAGKKVVVMKIYDSGTSERPYAHAFVVGIDRYPRKVTATMGKKKFERRTRVKAFAKF 74
Query: 315 VNYNHLMPTRYTVD-FSFEK---FSXXXXXXXXXXXXXXFNTRVRFEXRYKSGKNKWFFQ 482
+NYNHLM TRY+V F +K F + R+ + KN+WFF
Sbjct: 75 INYNHLMFTRYSVQLFPEDKAKTFGPDRWKNFSDRKEFKKELQTVMRERFLAAKNRWFFT 134
Query: 483 KLRF 494
KLRF
Sbjct: 135 KLRF 138
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 93.5 bits (222), Expect = 9e-18
Identities = 50/129 (38%), Positives = 71/129 (55%), Gaps = 9/129 (6%)
Frame = +3
Query: 135 SGRSAGRKALVVK--HSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFV 308
+G+ AGRKA+V+K A +P GH VAG+ + PR + + + + I KR+ ++ FV
Sbjct: 16 NGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPRSIVRSMSRKTILKRTAIRSFV 75
Query: 309 KVVNYNHLMPTRYTVDFSFEK-FSXXXXXXXXXXXXXXFNTRVR------FEXRYKSGKN 467
KVVNYNH+MPTRY + E F+ R FE ++K+GK+
Sbjct: 76 KVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQVAKRAHTRLAVKKIFEAKHKAGKS 135
Query: 468 KWFFQKLRF 494
KWFF KLRF
Sbjct: 136 KWFFSKLRF 144
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 93.1 bits (221), Expect = 1e-17
Identities = 45/120 (37%), Positives = 69/120 (57%)
Frame = +3
Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
+GR AG KA++V++S ++P G A +AG+ + P+KV + + K I +RS++ F++V
Sbjct: 15 AGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKYPKKVVRGMSKQTIARRSQVGVFLRV 74
Query: 315 VNYNHLMPTRYTVDFSFEKFSXXXXXXXXXXXXXXFNTRVRFEXRYKSGKNKWFFQKLRF 494
VN+ H +PTRY VD S E R F+ RY +G + WFFQ+LRF
Sbjct: 75 VNHKHFLPTRYNVDMSKELRGKINVSDASKRSRSKRLVRHVFQARYNAGSSMWFFQRLRF 134
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 89.8 bits (213), Expect = 1e-16
Identities = 39/69 (56%), Positives = 51/69 (73%)
Frame = +3
Query: 138 GRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKVV 317
GR AG+KA++VK S G D+ GH VAG+ RSP+KV KR+G +I KR+ +KPF+K V
Sbjct: 31 GRFAGKKAVIVKSSEDGTKDRKFGHVLVAGVERSPKKVTKRMGSKKIQKRTSVKPFIKYV 90
Query: 318 NYNHLMPTR 344
N NH+MPTR
Sbjct: 91 NLNHIMPTR 99
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 86.2 bits (204), Expect = 1e-15
Identities = 39/79 (49%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +3
Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
+GR AG+KA+VV +G D+P VAG+ ++P KVHKRL K ++ K+S +KPF+K
Sbjct: 32 NGRYAGKKAVVVNTFESGTKDRPFPFVLVAGVEKAPLKVHKRLSKEKLKKKSTIKPFLKS 91
Query: 315 VNYNHLMPTRYTV-DFSFE 368
+N NH+MPTRY V DF +
Sbjct: 92 INMNHVMPTRYVVSDFDIK 110
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 76.2 bits (179), Expect = 2e-12
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Frame = +3
Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
SGR AG+KA+V + G D+ G V G+ R+P K+ +++ R+ +K F KV
Sbjct: 15 SGRFAGKKAVVSSVNLQGTKDRKYGFVTVVGVERAPLKITRKMSAKVQEMRTSVKSFCKV 74
Query: 315 VNYNHLMPTRYTVDF-SFEKFSXXXXXXXXXXXXXXFNTR----VRFEXRYKSGKNKWFF 479
+N NH+MPT+YTV+ F + + +F Y+ GK W F
Sbjct: 75 INVNHVMPTKYTVNLEQFNLIKQVKINNFEAGKVYPISQKKAISSQFAEEYRKGKESWLF 134
Query: 480 QKLRF 494
KLRF
Sbjct: 135 TKLRF 139
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 76.2 bits (179), Expect = 2e-12
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = +3
Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
SGR AG KA+VV+ + + +P + VAG+ ++P KV K++ +I KR KLK FVK
Sbjct: 15 SGRRAGCKAVVVQTNESSSKKRPYLNCLVAGVEKAPMKVTKKMSSKKIEKRLKLKAFVKY 74
Query: 315 VNYNHLMPTRYTV 353
VN NHLMPTRY V
Sbjct: 75 VNVNHLMPTRYMV 87
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 76.2 bits (179), Expect = 2e-12
Identities = 35/76 (46%), Positives = 51/76 (67%)
Frame = +3
Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
+GR AG+KA+++K + D + V G+ R PRKV KR+G+ QI KR+ LK F+K
Sbjct: 914 AGRYAGKKAILIKANEETTKDCKFPNGLVVGIQRYPRKVTKRMGQKQIRKRTTLKVFIKQ 973
Query: 315 VNYNHLMPTRYTVDFS 362
+N NH+MPTRY ++ S
Sbjct: 974 LNLNHIMPTRYRLEES 989
>UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L27 - Aedes aegypti
(Yellowfever mosquito)
Length = 98
Score = 74.9 bits (176), Expect = 4e-12
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +3
Query: 138 GRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVK 311
GR AGRKA+++K G SDK GHA VAG+ R PR+V +R+ K ++HKRSK+KPF+K
Sbjct: 16 GRYAGRKAIILKTFDDGTSDKQFGHALVAGIDRYPRRVTRRMNKTRLHKRSKIKPFIK 73
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 73.7 bits (173), Expect = 8e-12
Identities = 31/71 (43%), Positives = 48/71 (67%)
Frame = +3
Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
+GR AG+KA+++ ++P + VAG+ + P KV K++ K +I KRSK+K FVK
Sbjct: 107 NGRRAGKKAIIINTYEGQTRERPYSYCLVAGIEKHPLKVTKKMSKGKIIKRSKVKAFVKY 166
Query: 315 VNYNHLMPTRY 347
+N NH++PTRY
Sbjct: 167 INVNHILPTRY 177
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 65.7 bits (153), Expect = 2e-09
Identities = 35/74 (47%), Positives = 45/74 (60%)
Frame = +3
Query: 150 GRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKVVNYNH 329
G +++ + G SDK HA VAG+ PRK+ LGK +I KRSK+K FV V NYNH
Sbjct: 5 GSSSILFYDTDDGTSDKSYSHAQVAGIDLYPRKLTAALGK-KISKRSKIKFFVAVYNYNH 63
Query: 330 LMPTRYTVDFSFEK 371
L RY+VD +K
Sbjct: 64 LKSIRYSVDIPLDK 77
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 65.3 bits (152), Expect = 3e-09
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
Frame = +3
Query: 138 GRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKVV 317
GR AG+KA+V+ G D+ +A V G+ + P+KV K + + K++++K FVK V
Sbjct: 15 GRHAGKKAVVLAAYPEGTEDRKFPYAIVMGIEKYPKKVTKDMPTEVLVKKTQVKLFVKAV 74
Query: 318 NYNHLMPTRYTV---DFSFEKFSXXXXXXXXXXXXXXFNTRVRF----EXRYKSGKNKWF 476
N+NH+M TR+ V DF F+K S + +Y + K WF
Sbjct: 75 NFNHVMLTRHNVKDEDF-FKKISVEKVVAALKDAPAKKALLTEYAAVLRQKYLNNKMAWF 133
Query: 477 FQKLRF 494
F+ L+F
Sbjct: 134 FKPLQF 139
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 64.9 bits (151), Expect = 4e-09
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +3
Query: 246 KVHKRLGKHQIHKRSKLKPFVKVVNYNHLMPTRYTVDFSF-EKFSXXXXXXXXXXXXXXF 422
+V K++ + + KRSK K F+K +NY+HLMPTRYT+D +F + +
Sbjct: 101 QVTKKMDEKKQAKRSKCKTFIKNINYSHLMPTRYTLDVNFKDVVTSDVLDNATKKVAAQK 160
Query: 423 NTRVRFEXRYKSGKNKWFFQKLRF 494
+ E R+K+GK++WFF +L F
Sbjct: 161 EAKKLLEERFKTGKSRWFFTRLAF 184
Score = 46.8 bits (106), Expect = 0.001
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = +3
Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPF 305
+GR AG+KA++VK+ G S P GHA V GL PRKV ++ +H+ ++ PF
Sbjct: 33 AGRYAGKKAVIVKNVDDGNSAHPYGHALVCGLSTIPRKV-----RNDLHRCARTAPF 84
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 64.1 bits (149), Expect = 7e-09
Identities = 29/65 (44%), Positives = 41/65 (63%)
Frame = +3
Query: 168 VKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKVVNYNHLMPTRY 347
+K + D + V G+ R PRKV KR+G+ QI KR+ LK F+K +N NH+MPTRY
Sbjct: 136 IKANEESTKDAKFPNGLVVGIQRYPRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRY 195
Query: 348 TVDFS 362
++ S
Sbjct: 196 RLEES 200
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 62.9 bits (146), Expect = 2e-08
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Frame = +3
Query: 123 CWSFSGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKP 302
C GR AG+KA++V+ A P ++ +A VAG+ PR++ + + R +++
Sbjct: 12 CIVLQGRHAGKKAVIVE---ALPHNERGSYAIVAGIAALPRRITNSMSDEEAVCRGRVRS 68
Query: 303 FVKVVNYNHLMPTRYTVDFSFEKFSXXXXXXXXXXXXXXFNT-RVRFEXRYKSGKNKWFF 479
FVK +N NHLMPT ++ +++ F T F+ R ++ WFF
Sbjct: 69 FVKCMNVNHLMPTSCRLENNYKDFISTQTVADVTKRREIIETVNKDFQRRILEHRDTWFF 128
Query: 480 QKL 488
KL
Sbjct: 129 TKL 131
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 50.0 bits (114), Expect = 1e-04
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Frame = +3
Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
SG+ AG+KA V+K+S + + G+ + +K+ + K +I + K F+K
Sbjct: 15 SGKYAGKKAFVLKNSNIESLCEKK--IIILGIKKEMKKIKYNMSKRKIISNLRFKTFIKT 72
Query: 315 VNYNHLMPTRYTVDFSFEKFSXXXXXXXXXXXXXXFNTRVR-------------FEXRYK 455
+N H+ PTRY ++ + + F N + R
Sbjct: 73 INIKHVFPTRYVIE-TDDVFKTLIDAYYTNKLGNKLNEHTNEKAKVNLVSINNYLQDRLL 131
Query: 456 SGKNKWFFQKLRF 494
GKN WFF+K++F
Sbjct: 132 RGKNLWFFKKMKF 144
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 38.7 bits (86), Expect = 0.28
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3
Query: 420 FNTRVRFEXRYKSGKNKWFFQKLRF 494
F TRV+ + KSG+NKWFFQK RF
Sbjct: 71 FQTRVKVQEGSKSGRNKWFFQKGRF 95
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 38.7 bits (86), Expect = 0.28
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 633 DPXMIXYIDEFGQTTTKMQ 689
DP MI YIDEFGQTTT+MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 37.1 bits (82), Expect = 0.87
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = +3
Query: 834 LMNRPTXGERXFXYWXXFXFL 896
LMNRPT GER F YW F FL
Sbjct: 27 LMNRPTRGERRFAYWALFRFL 47
>UniRef50_Q0U0U7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 174
Score = 35.5 bits (78), Expect = 2.7
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = -3
Query: 257 LVHFPGGPXETS---DEGMPXWLVGGTCGGMLDXESLATRGPATEGPARXDPAAMXXPXL 87
LVHF G + D+ + WLVGG G+L A G T P+ + A+ P
Sbjct: 94 LVHFLSGVAHVTAPQDDSVSLWLVGGK-SGLLFAVDTAGAGHITRYPSDQETVAITAPFA 152
Query: 86 GGRRP 72
GG+ P
Sbjct: 153 GGKLP 157
>UniRef50_Q90268 Cluster: Paired box protein Pax-2a; n=68;
Vertebrata|Rep: Paired box protein Pax-2a - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 410
Score = 34.7 bits (76), Expect = 4.6
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +1
Query: 79 LPPSXGXXIAAGSXRAGPSVAGPRVARLSXSSIPPQVPPTSHXGMPSSLVSXGPPGKCTS 258
L S + + ++ P V G +A + PP VPPT P+S ++ PG S
Sbjct: 302 LSTSVSSDLGSSVSQSYPVVTGREMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSDFS 361
Query: 259 G 261
G
Sbjct: 362 G 362
>UniRef50_UPI00015A5EFF Cluster: Uncharacterized protein C4orf8
(Protein IT14).; n=2; Danio rerio|Rep: Uncharacterized
protein C4orf8 (Protein IT14). - Danio rerio
Length = 1204
Score = 34.3 bits (75), Expect = 6.1
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 130 PSVAGPRVARLSXSSIPPQVPPTSHXGMPSSLVSXGPPG 246
P+ PR + S SS+PP + P SH P++L S PPG
Sbjct: 653 PTPIAPRNSPTSVSSLPP-LNPASHASSPNTLPSIVPPG 690
>UniRef50_A4A253 Cluster: ISRm2011-2 transposase protein; n=1;
Blastopirellula marina DSM 3645|Rep: ISRm2011-2
transposase protein - Blastopirellula marina DSM 3645
Length = 173
Score = 34.3 bits (75), Expect = 6.1
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 45 LAFLCPRVXGPSPSKSGXXHCXRVXSCWSFSGRSAGRKAL 164
L FL P GP P+++G + +CWS R+ GR+AL
Sbjct: 124 LRFLSPVFAGPEPNRTGLLKAQKTAACWS---RTNGRQAL 160
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 33.9 bits (74), Expect = 8.1
Identities = 29/121 (23%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Frame = +3
Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
SG++AG+KA+V+K + A + R P++ K + +K +K
Sbjct: 13 SGKNAGKKAVVIKQI-------DERYVLTACVVRIPKEPEDHQPKWIKRRNAKFYIILKK 65
Query: 315 VNYNHLMPTRYTVDFSFEKFSXXXXXXXXXXXXXXFN-TRVRFEXRYKSGKNKWFFQKLR 491
N HL+ TRY D N T+ +K K K+ F L
Sbjct: 66 YNIAHLIATRYKADLGLATIDYSGIEDNAETKKVLTNKTKDAMMKAWKENKAKFLFSSLS 125
Query: 492 F 494
F
Sbjct: 126 F 126
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,364,559
Number of Sequences: 1657284
Number of extensions: 11100484
Number of successful extensions: 29513
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29346
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 116285896298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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