Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_L08
         (1168 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L19527-1|AAA19815.1|  136|Homo sapiens ribosomal protein L27 pro...   132   2e-30
L05094-1|AAC15857.1|  136|Homo sapiens ribosomal protein L27 pro...   132   2e-30
BC098560-1|AAH98560.1|  136|Homo sapiens ribosomal protein L27 p...   132   2e-30
BC021886-1|AAH21886.1|  140|Homo sapiens RPL27 protein protein.       132   2e-30
BC010026-1|AAH10026.1|  136|Homo sapiens ribosomal protein L27 p...   132   2e-30
BC007273-1|AAH07273.1|  136|Homo sapiens ribosomal protein L27 p...   132   2e-30
BC002588-1|AAH02588.1|  136|Homo sapiens ribosomal protein L27 p...   132   2e-30
BC001700-1|AAH01700.1|  136|Homo sapiens ribosomal protein L27 p...   132   2e-30
AB061851-1|BAB79492.1|  136|Homo sapiens ribosomal protein L27 p...   132   2e-30
U25752-1|AAA93226.1|   40|Homo sapiens ribosomal protein L27 pro...    47   2e-04
U45255-1|AAC63385.1|  416|Homo sapiens paired-box protein PAX2 p...    33   2.6  
M89470-1|AAA60024.1|  393|Homo sapiens paired-box protein protein.     33   2.6  
AY153484-1|AAN77900.1|  173|Homo sapiens paired box transcriptio...    33   2.6  
AL589862-2|CAI17856.1|  394|Homo sapiens paired box gene 2 protein.    33   2.6  
AL138762-5|CAH70952.1|  394|Homo sapiens paired box gene 2 protein.    33   2.6  

>L19527-1|AAA19815.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  132 bits (320), Expect = 2e-30
 Identities = 65/122 (53%), Positives = 81/122 (66%), Gaps = 2/122 (1%)
 Frame = +3

Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
           +GR +GRKA++VK+   G SD+P  HA VAG+ R PRKV   +GK +I KRSK+K FVKV
Sbjct: 15  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74

Query: 315 VNYNHLMPTRYTVDFSFEK--FSXXXXXXXXXXXXXXFNTRVRFEXRYKSGKNKWFFQKL 488
            NYNHLMPTRY+VD   +K   +                 +V+FE RYK+GKNKWFFQKL
Sbjct: 75  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134

Query: 489 RF 494
           RF
Sbjct: 135 RF 136


>L05094-1|AAC15857.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  132 bits (320), Expect = 2e-30
 Identities = 65/122 (53%), Positives = 81/122 (66%), Gaps = 2/122 (1%)
 Frame = +3

Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
           +GR +GRKA++VK+   G SD+P  HA VAG+ R PRKV   +GK +I KRSK+K FVKV
Sbjct: 15  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74

Query: 315 VNYNHLMPTRYTVDFSFEK--FSXXXXXXXXXXXXXXFNTRVRFEXRYKSGKNKWFFQKL 488
            NYNHLMPTRY+VD   +K   +                 +V+FE RYK+GKNKWFFQKL
Sbjct: 75  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134

Query: 489 RF 494
           RF
Sbjct: 135 RF 136


>BC098560-1|AAH98560.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  132 bits (320), Expect = 2e-30
 Identities = 65/122 (53%), Positives = 81/122 (66%), Gaps = 2/122 (1%)
 Frame = +3

Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
           +GR +GRKA++VK+   G SD+P  HA VAG+ R PRKV   +GK +I KRSK+K FVKV
Sbjct: 15  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74

Query: 315 VNYNHLMPTRYTVDFSFEK--FSXXXXXXXXXXXXXXFNTRVRFEXRYKSGKNKWFFQKL 488
            NYNHLMPTRY+VD   +K   +                 +V+FE RYK+GKNKWFFQKL
Sbjct: 75  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134

Query: 489 RF 494
           RF
Sbjct: 135 RF 136


>BC021886-1|AAH21886.1|  140|Homo sapiens RPL27 protein protein.
          Length = 140

 Score =  132 bits (320), Expect = 2e-30
 Identities = 65/122 (53%), Positives = 81/122 (66%), Gaps = 2/122 (1%)
 Frame = +3

Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
           +GR +GRKA++VK+   G SD+P  HA VAG+ R PRKV   +GK +I KRSK+K FVKV
Sbjct: 19  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 78

Query: 315 VNYNHLMPTRYTVDFSFEK--FSXXXXXXXXXXXXXXFNTRVRFEXRYKSGKNKWFFQKL 488
            NYNHLMPTRY+VD   +K   +                 +V+FE RYK+GKNKWFFQKL
Sbjct: 79  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 138

Query: 489 RF 494
           RF
Sbjct: 139 RF 140


>BC010026-1|AAH10026.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  132 bits (320), Expect = 2e-30
 Identities = 65/122 (53%), Positives = 81/122 (66%), Gaps = 2/122 (1%)
 Frame = +3

Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
           +GR +GRKA++VK+   G SD+P  HA VAG+ R PRKV   +GK +I KRSK+K FVKV
Sbjct: 15  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74

Query: 315 VNYNHLMPTRYTVDFSFEK--FSXXXXXXXXXXXXXXFNTRVRFEXRYKSGKNKWFFQKL 488
            NYNHLMPTRY+VD   +K   +                 +V+FE RYK+GKNKWFFQKL
Sbjct: 75  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134

Query: 489 RF 494
           RF
Sbjct: 135 RF 136


>BC007273-1|AAH07273.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  132 bits (320), Expect = 2e-30
 Identities = 65/122 (53%), Positives = 81/122 (66%), Gaps = 2/122 (1%)
 Frame = +3

Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
           +GR +GRKA++VK+   G SD+P  HA VAG+ R PRKV   +GK +I KRSK+K FVKV
Sbjct: 15  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74

Query: 315 VNYNHLMPTRYTVDFSFEK--FSXXXXXXXXXXXXXXFNTRVRFEXRYKSGKNKWFFQKL 488
            NYNHLMPTRY+VD   +K   +                 +V+FE RYK+GKNKWFFQKL
Sbjct: 75  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134

Query: 489 RF 494
           RF
Sbjct: 135 RF 136


>BC002588-1|AAH02588.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  132 bits (320), Expect = 2e-30
 Identities = 65/122 (53%), Positives = 81/122 (66%), Gaps = 2/122 (1%)
 Frame = +3

Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
           +GR +GRKA++VK+   G SD+P  HA VAG+ R PRKV   +GK +I KRSK+K FVKV
Sbjct: 15  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74

Query: 315 VNYNHLMPTRYTVDFSFEK--FSXXXXXXXXXXXXXXFNTRVRFEXRYKSGKNKWFFQKL 488
            NYNHLMPTRY+VD   +K   +                 +V+FE RYK+GKNKWFFQKL
Sbjct: 75  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134

Query: 489 RF 494
           RF
Sbjct: 135 RF 136


>BC001700-1|AAH01700.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  132 bits (320), Expect = 2e-30
 Identities = 65/122 (53%), Positives = 81/122 (66%), Gaps = 2/122 (1%)
 Frame = +3

Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
           +GR +GRKA++VK+   G SD+P  HA VAG+ R PRKV   +GK +I KRSK+K FVKV
Sbjct: 15  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74

Query: 315 VNYNHLMPTRYTVDFSFEK--FSXXXXXXXXXXXXXXFNTRVRFEXRYKSGKNKWFFQKL 488
            NYNHLMPTRY+VD   +K   +                 +V+FE RYK+GKNKWFFQKL
Sbjct: 75  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134

Query: 489 RF 494
           RF
Sbjct: 135 RF 136


>AB061851-1|BAB79492.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  132 bits (320), Expect = 2e-30
 Identities = 65/122 (53%), Positives = 81/122 (66%), Gaps = 2/122 (1%)
 Frame = +3

Query: 135 SGRSAGRKALVVKHSAAGPSDKPXGHAFVAGLXRSPRKVHKRLGKHQIHKRSKLKPFVKV 314
           +GR +GRKA++VK+   G SD+P  HA VAG+ R PRKV   +GK +I KRSK+K FVKV
Sbjct: 15  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74

Query: 315 VNYNHLMPTRYTVDFSFEK--FSXXXXXXXXXXXXXXFNTRVRFEXRYKSGKNKWFFQKL 488
            NYNHLMPTRY+VD   +K   +                 +V+FE RYK+GKNKWFFQKL
Sbjct: 75  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134

Query: 489 RF 494
           RF
Sbjct: 135 RF 136


>U25752-1|AAA93226.1|   40|Homo sapiens ribosomal protein L27
           protein.
          Length = 40

 Score = 46.8 bits (106), Expect = 2e-04
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = +3

Query: 429 RVRFEXRYKSGKNKWFFQKLRF 494
           +V+FE RYK+GKNKWFFQKLRF
Sbjct: 19  KVKFEERYKTGKNKWFFQKLRF 40


>U45255-1|AAC63385.1|  416|Homo sapiens paired-box protein PAX2
           protein.
          Length = 416

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 130 PSVAGPRVARLSXSSIPPQVPPTSHXGMPSSLVSXGPPGKCTSG 261
           P V G  +A  +    PP VPPT     P+S ++   PG   SG
Sbjct: 326 PVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSG 369


>M89470-1|AAA60024.1|  393|Homo sapiens paired-box protein protein.
          Length = 393

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 130 PSVAGPRVARLSXSSIPPQVPPTSHXGMPSSLVSXGPPGKCTSG 261
           P V G  +A  +    PP VPPT     P+S ++   PG   SG
Sbjct: 303 PVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSG 346


>AY153484-1|AAN77900.1|  173|Homo sapiens paired box transcription
           factor protein.
          Length = 173

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 130 PSVAGPRVARLSXSSIPPQVPPTSHXGMPSSLVSXGPPGKCTSG 261
           P V G  +A  +    PP VPPT     P+S ++   PG   SG
Sbjct: 61  PVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSG 104


>AL589862-2|CAI17856.1|  394|Homo sapiens paired box gene 2 protein.
          Length = 394

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 130 PSVAGPRVARLSXSSIPPQVPPTSHXGMPSSLVSXGPPGKCTSG 261
           P V G  +A  +    PP VPPT     P+S ++   PG   SG
Sbjct: 303 PVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSG 346


>AL138762-5|CAH70952.1|  394|Homo sapiens paired box gene 2 protein.
          Length = 394

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 130 PSVAGPRVARLSXSSIPPQVPPTSHXGMPSSLVSXGPPGKCTSG 261
           P V G  +A  +    PP VPPT     P+S ++   PG   SG
Sbjct: 303 PVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSG 346


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,960,843
Number of Sequences: 237096
Number of extensions: 1956648
Number of successful extensions: 4756
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4705
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16293684080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)