Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_L06
         (1216 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3024|AAF55906.1|  156|Drosophila melanogaster CG6353-PA...   181   2e-45
BT003491-1|AAO39494.1|  156|Drosophila melanogaster SD28072p pro...   179   8e-45

>AE014297-3024|AAF55906.1|  156|Drosophila melanogaster CG6353-PA
           protein.
          Length = 156

 Score =  181 bits (441), Expect = 2e-45
 Identities = 82/143 (57%), Positives = 100/143 (69%)
 Frame = +3

Query: 213 SEASYXIPPVKXXXLDHTADVQLHAWGDSLKEAFEQCGMAMFGYMTELEYVQIKDVHTIE 392
           S  ++ +P +K   LDHTADVQ+H WG SLKEAFEQCG+AMFGYMTEL+YV ++    IE
Sbjct: 6   SRENFLLPEMKYEYLDHTADVQIHGWGSSLKEAFEQCGVAMFGYMTELDYVSVEQCFEIE 65

Query: 393 ASADDLMGXXXXXXXXXXXXXSYEPFLICKKLVITEFNTQEFKIVCRCYGEEFVIGKHPQ 572
           A  DDL               S EP+L+CKKL IT+F+ + F+I C CYGE F +GKHPQ
Sbjct: 66  AHGDDLESLLFHFLDELLFLFSAEPYLVCKKLEITKFDVENFEISCHCYGEPFELGKHPQ 125

Query: 573 GTEVKAITYSAMQIIDDPKDNKY 641
           GTEVKAITYSAMQII D + + Y
Sbjct: 126 GTEVKAITYSAMQIIQDVEASNY 148


>BT003491-1|AAO39494.1|  156|Drosophila melanogaster SD28072p
           protein.
          Length = 156

 Score =  179 bits (435), Expect = 8e-45
 Identities = 81/143 (56%), Positives = 99/143 (69%)
 Frame = +3

Query: 213 SEASYXIPPVKXXXLDHTADVQLHAWGDSLKEAFEQCGMAMFGYMTELEYVQIKDVHTIE 392
           S  ++ +P +K   LDHTADVQ+H WG SLKEAFEQCG+AMFGYMTEL+YV ++    IE
Sbjct: 6   SRENFLLPEMKYEYLDHTADVQIHGWGSSLKEAFEQCGVAMFGYMTELDYVSVEQCFEIE 65

Query: 393 ASADDLMGXXXXXXXXXXXXXSYEPFLICKKLVITEFNTQEFKIVCRCYGEEFVIGKHPQ 572
           A  DDL               S EP+L+C KL IT+F+ + F+I C CYGE F +GKHPQ
Sbjct: 66  AHGDDLESLLFHFLDELLFLFSAEPYLVCMKLEITKFDVENFEISCHCYGEPFELGKHPQ 125

Query: 573 GTEVKAITYSAMQIIDDPKDNKY 641
           GTEVKAITYSAMQII D + + Y
Sbjct: 126 GTEVKAITYSAMQIIQDVEASNY 148


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,026,112
Number of Sequences: 53049
Number of extensions: 535912
Number of successful extensions: 858
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6458274285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)