Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_L06
         (1216 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098499-2|AAC67396.1|  155|Caenorhabditis elegans Hypothetical ...    97   2e-20
Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical pr...    31   1.6  

>AF098499-2|AAC67396.1|  155|Caenorhabditis elegans Hypothetical
           protein C43H8.1 protein.
          Length = 155

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 49/125 (39%), Positives = 71/125 (56%)
 Frame = +3

Query: 255 LDHTADVQLHAWGDSLKEAFEQCGMAMFGYMTELEYVQIKDVHTIEASADDLMGXXXXXX 434
           LDH AD+QLH+WG +++EAFE C ++MFGYMT+L  V        +AS D L G      
Sbjct: 21  LDHPADIQLHSWGSTMEEAFEACLVSMFGYMTDLAKVDEMYEFYWKASGDSLDGLLFQFL 80

Query: 435 XXXXXXXSYEPFLICKKLVITEFNTQEFKIVCRCYGEEFVIGKHPQGTEVKAITYSAMQI 614
                    EP  + K++ I  F+ ++F+I  R +GE F   KH    ++K+ TYS MQI
Sbjct: 81  DEALNSFHAEPCFVAKRVEILRFDKKKFEIEFRGWGESFDTSKHETEADIKSPTYSNMQI 140

Query: 615 IDDPK 629
            + P+
Sbjct: 141 NEKPE 145


>Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical
           protein T05E11.3 protein.
          Length = 760

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 14/58 (24%), Positives = 27/58 (46%)
 Frame = +3

Query: 459 YEPFLICKKLVITEFNTQEFKIVCRCYGEEFVIGKHPQGTEVKAITYSAMQIIDDPKD 632
           Y  FL+  ++V+T  N  + + +       F I K P+G  +K  T   + + ++  D
Sbjct: 188 YAAFLVADRVVVTTKNNDDDQYIWESDSASFTISKDPRGNTLKRGTQITLYLKEEAAD 245


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,803,491
Number of Sequences: 27780
Number of extensions: 265929
Number of successful extensions: 500
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3349461018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)