Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_L03
(1160 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC051794-1|AAH51794.1| 409|Homo sapiens family with sequence si... 93 1e-18
BC046441-1|AAH46441.1| 409|Homo sapiens family with sequence si... 93 1e-18
AL139132-4|CAH70924.1| 409|Homo sapiens family with sequence si... 93 1e-18
AB007944-1|BAA32320.2| 438|Homo sapiens KIAA0475 protein protein. 93 1e-18
AL139132-3|CAH70923.1| 138|Homo sapiens family with sequence si... 73 3e-12
BC040074-1|AAH40074.1| 570|Homo sapiens FAM20C protein protein. 44 8e-04
AF533706-1|AAQ09019.1| 584|Homo sapiens unknown protein protein. 44 8e-04
AY358197-1|AAQ88564.1| 541|Homo sapiens PGLR9388 protein. 38 0.069
AK056789-1|BAB71285.1| 541|Homo sapiens protein ( Homo sapiens ... 38 0.069
BC036222-1|AAH36222.1| 247|Homo sapiens FAM20A protein protein. 36 0.28
AL445186-4|CAI40244.1| 170|Homo sapiens pre-B-cell leukemia hom... 34 1.1
AF355142-1|AAL09478.1| 170|Homo sapiens pre-B-cell leukemia tra... 34 1.1
U83844-1|AAB41438.1| 319|Homo sapiens HIV-1 Nef interacting pro... 33 2.0
U39403-1|AAC99999.1| 500|Homo sapiens protein ( Human fetal cra... 33 2.0
D30755-1|BAA06416.2| 636|Homo sapiens KIAA0113 protein. 33 2.0
BC014008-1|AAH14008.1| 636|Homo sapiens TNIP1 protein protein. 33 2.0
BC012133-1|AAH12133.1| 636|Homo sapiens TNFAIP3 interacting pro... 33 2.0
AY012155-1|AAG42154.1| 636|Homo sapiens virion-associated nucle... 33 2.0
AJ011896-1|CAA09856.1| 635|Homo sapiens Naf1 beta protein protein. 33 2.0
AJ011895-1|CAA09855.1| 636|Homo sapiens Naf1 alpha protein prot... 33 2.0
AB252982-1|BAF48799.1| 630|Homo sapiens Nef-associated factor 1... 33 2.0
AB252981-1|BAF48798.1| 506|Homo sapiens Nef-associated factor 1... 33 2.0
AB252980-1|BAF48797.1| 499|Homo sapiens Nef-associated factor 1... 33 2.0
AB252979-1|BAF48796.1| 525|Homo sapiens Nef-associated factor 1... 33 2.0
AB252978-1|BAF48795.1| 499|Homo sapiens Nef-associated factor 1... 33 2.0
AB252977-1|BAF48794.1| 510|Homo sapiens Nef-associated factor 1... 33 2.0
AB252976-1|BAF48793.1| 526|Homo sapiens Nef-associated factor 1... 33 2.0
AB252973-1|BAF48790.1| 635|Homo sapiens Nef-associated factor 1... 33 2.0
AB252972-1|BAF48789.1| 636|Homo sapiens Nef-associated factor 1... 33 2.0
AB252971-1|BAF48788.1| 635|Homo sapiens Nef-associated factor 1... 33 2.0
AB252970-1|BAF48787.1| 636|Homo sapiens Nef-associated factor 1... 33 2.0
AB177544-1|BAF34947.1| 556|Homo sapiens NEF-associated factor 1... 33 2.0
AB177543-1|BAF34946.1| 572|Homo sapiens NEF-associated factor 1... 33 2.0
>BC051794-1|AAH51794.1| 409|Homo sapiens family with sequence
similarity 20, member B protein.
Length = 409
Score = 93.5 bits (222), Expect = 1e-18
Identities = 46/113 (40%), Positives = 68/113 (60%)
Frame = +3
Query: 636 LENIWNTVDNWVDNESLFPDKNGDPGRILHAIKSSPIALVDNAPKGTQLKLLLILESKQK 815
L++ W WV ++P++ + G ++HA+ + I D KGTQLK LLILE QK
Sbjct: 60 LQSPWEIAAQWVVPREVYPEETPELGAVMHAMATKKIIKADVGYKGTQLKALLILEGGQK 119
Query: 816 VLFKPKRYNLTEVIKGPVYAGXDRYNSEVXAYYLGMVXNMRWIAPAVPMRIMS 974
V+FKPKRY+ V++G YAG DR+N+EV A++L + AP V R ++
Sbjct: 120 VVFKPKRYSRDHVVEGEPYAGYDRHNAEVAAFHLDRILGFH-RAPLVVGRFVN 171
>BC046441-1|AAH46441.1| 409|Homo sapiens family with sequence
similarity 20, member B protein.
Length = 409
Score = 93.5 bits (222), Expect = 1e-18
Identities = 46/113 (40%), Positives = 68/113 (60%)
Frame = +3
Query: 636 LENIWNTVDNWVDNESLFPDKNGDPGRILHAIKSSPIALVDNAPKGTQLKLLLILESKQK 815
L++ W WV ++P++ + G ++HA+ + I D KGTQLK LLILE QK
Sbjct: 60 LQSPWEIAAQWVVPREVYPEETPELGAVMHAMATKKIIKADVGYKGTQLKALLILEGGQK 119
Query: 816 VLFKPKRYNLTEVIKGPVYAGXDRYNSEVXAYYLGMVXNMRWIAPAVPMRIMS 974
V+FKPKRY+ V++G YAG DR+N+EV A++L + AP V R ++
Sbjct: 120 VVFKPKRYSRDHVVEGEPYAGYDRHNAEVAAFHLDRILGFH-RAPLVVGRFVN 171
>AL139132-4|CAH70924.1| 409|Homo sapiens family with sequence
similarity 20, member B protein.
Length = 409
Score = 93.5 bits (222), Expect = 1e-18
Identities = 46/113 (40%), Positives = 68/113 (60%)
Frame = +3
Query: 636 LENIWNTVDNWVDNESLFPDKNGDPGRILHAIKSSPIALVDNAPKGTQLKLLLILESKQK 815
L++ W WV ++P++ + G ++HA+ + I D KGTQLK LLILE QK
Sbjct: 60 LQSPWEIAAQWVVPREVYPEETPELGAVMHAMATKKIIKADVGYKGTQLKALLILEGGQK 119
Query: 816 VLFKPKRYNLTEVIKGPVYAGXDRYNSEVXAYYLGMVXNMRWIAPAVPMRIMS 974
V+FKPKRY+ V++G YAG DR+N+EV A++L + AP V R ++
Sbjct: 120 VVFKPKRYSRDHVVEGEPYAGYDRHNAEVAAFHLDRILGFH-RAPLVVGRFVN 171
>AB007944-1|BAA32320.2| 438|Homo sapiens KIAA0475 protein protein.
Length = 438
Score = 93.5 bits (222), Expect = 1e-18
Identities = 46/113 (40%), Positives = 68/113 (60%)
Frame = +3
Query: 636 LENIWNTVDNWVDNESLFPDKNGDPGRILHAIKSSPIALVDNAPKGTQLKLLLILESKQK 815
L++ W WV ++P++ + G ++HA+ + I D KGTQLK LLILE QK
Sbjct: 89 LQSPWEIAAQWVVPREVYPEETPELGAVMHAMATKKIIKADVGYKGTQLKALLILEGGQK 148
Query: 816 VLFKPKRYNLTEVIKGPVYAGXDRYNSEVXAYYLGMVXNMRWIAPAVPMRIMS 974
V+FKPKRY+ V++G YAG DR+N+EV A++L + AP V R ++
Sbjct: 149 VVFKPKRYSRDHVVEGEPYAGYDRHNAEVAAFHLDRILGFH-RAPLVVGRFVN 200
>AL139132-3|CAH70923.1| 138|Homo sapiens family with sequence
similarity 20, member B protein.
Length = 138
Score = 72.5 bits (170), Expect = 3e-12
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 636 LENIWNTVDNWVDNESLFPDKNGDPGRILHAIKSSPIALVDNAPKGTQLKLLLILESKQK 815
L++ W WV ++P++ + G ++HA+ + I D KGTQLK LLILE QK
Sbjct: 60 LQSPWEIAAQWVVPREVYPEETPELGAVMHAMATKKIIKADVGYKGTQLKALLILEGGQK 119
Query: 816 VLFKPKRYNLTEVIKGPVY 872
V+FKPKRY+ V++G Y
Sbjct: 120 VVFKPKRYSRDHVVEGEPY 138
>BC040074-1|AAH40074.1| 570|Homo sapiens FAM20C protein protein.
Length = 570
Score = 44.4 bits (100), Expect = 8e-04
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +3
Query: 669 VDNESLFPDKNGDPGRILHAIKSSPIALVDNAPKGTQLKLLLILESKQKVLFKPKRYNLT 848
++ L+ N +LH + S I V GTQLKL++ ++ + LFKP +
Sbjct: 219 INRYELYSRHNPAIEALLHDLSSQRITSVAMKSGGTQLKLIMTFQNYGQALFKPMKQTRE 278
Query: 849 EVIKGP--VYAGXDRYNSEVXAYYLGMVXNMRWIAPAVPMRI-MSKMISXLWR 998
+ ++ +R+N+E+ A++L + + R + P + M+K I + R
Sbjct: 279 QETPPDFFYFSDYERHNAEIAAFHLDRILDFRRVPPVAGRMVNMTKEIRDVTR 331
>AF533706-1|AAQ09019.1| 584|Homo sapiens unknown protein protein.
Length = 584
Score = 44.4 bits (100), Expect = 8e-04
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +3
Query: 669 VDNESLFPDKNGDPGRILHAIKSSPIALVDNAPKGTQLKLLLILESKQKVLFKPKRYNLT 848
++ L+ N +LH + S I V GTQLKL++ ++ + LFKP +
Sbjct: 233 INRYELYSRHNPAIEALLHDLSSQRITSVAMKSGGTQLKLIMTFQNYGQALFKPMKQTRE 292
Query: 849 EVIKGP--VYAGXDRYNSEVXAYYLGMVXNMRWIAPAVPMRI-MSKMISXLWR 998
+ ++ +R+N+E+ A++L + + R + P + M+K I + R
Sbjct: 293 QETPPDFFYFSDYERHNAEIAAFHLDRILDFRRVPPVAGRMVNMTKEIRDVTR 345
>AY358197-1|AAQ88564.1| 541|Homo sapiens PGLR9388 protein.
Length = 541
Score = 37.9 bits (84), Expect = 0.069
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 765 PKGTQLKLLLILESKQKVLFKPKRYNLTEVIKGPVYAGXD--RYNSEVXAYYLGMVXNMR 938
P G LKL+L K +FKP R E + D R+N+E+ A++L + + R
Sbjct: 217 PSGVHLKLVLRFSDFGKAMFKPMRQQRDEETPVDFFYFIDFQRHNAEIAAFHLDRILDFR 276
Query: 939 WIAPAV 956
+ P V
Sbjct: 277 RVPPTV 282
>AK056789-1|BAB71285.1| 541|Homo sapiens protein ( Homo sapiens
cDNA FLJ32227 fis, clone PLACE6004396. ).
Length = 541
Score = 37.9 bits (84), Expect = 0.069
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 765 PKGTQLKLLLILESKQKVLFKPKRYNLTEVIKGPVYAGXD--RYNSEVXAYYLGMVXNMR 938
P G LKL+L K +FKP R E + D R+N+E+ A++L + + R
Sbjct: 217 PSGVHLKLVLRFSDFGKAMFKPMRQQRDEETPVDFFYFIDFQRHNAEIAAFHLDRILDFR 276
Query: 939 WIAPAV 956
+ P V
Sbjct: 277 RVPPTV 282
>BC036222-1|AAH36222.1| 247|Homo sapiens FAM20A protein protein.
Length = 247
Score = 35.9 bits (79), Expect = 0.28
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 765 PKGTQLKLLLILESKQKVLFKPKRYNLTEV-IKGPVYAGXDRYNSEVXAYYLGMVXNMRW 941
P G LKL+L K +FKP E + + R+N+E+ A++L + + R
Sbjct: 79 PSGVHLKLVLRFSDFGKAMFKPHEQRDEETPVDFFYFIDFQRHNAEIAAFHLDRILDFRR 138
Query: 942 IAPAV 956
+ P V
Sbjct: 139 VPPTV 143
>AL445186-4|CAI40244.1| 170|Homo sapiens pre-B-cell leukemia
homeobox 3 protein.
Length = 170
Score = 33.9 bits (74), Expect = 1.1
Identities = 21/94 (22%), Positives = 42/94 (44%)
Frame = +3
Query: 429 LLNIYFFYNLSTTKPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALI 608
+LN YF+ +LS P+ + A+ ++++ F + + +YK KF ++A +
Sbjct: 68 ILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQ--EEANL 125
Query: 609 ASLNSTITELENIWNTVDNWVDNESLFPDKNGDP 710
+ + +T + V N N P+ G P
Sbjct: 126 YAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGGYP 159
>AF355142-1|AAL09478.1| 170|Homo sapiens pre-B-cell leukemia
transcription factor 3D protein.
Length = 170
Score = 33.9 bits (74), Expect = 1.1
Identities = 21/94 (22%), Positives = 42/94 (44%)
Frame = +3
Query: 429 LLNIYFFYNLSTTKPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALI 608
+LN YF+ +LS P+ + A+ ++++ F + + +YK KF ++A +
Sbjct: 68 ILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQ--EEANL 125
Query: 609 ASLNSTITELENIWNTVDNWVDNESLFPDKNGDP 710
+ + +T + V N N P+ G P
Sbjct: 126 YAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGGYP 159
>U83844-1|AAB41438.1| 319|Homo sapiens HIV-1 Nef interacting
protein protein.
Length = 319
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 208 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 260
>U39403-1|AAC99999.1| 500|Homo sapiens protein ( Human fetal
craniofacial mRNA, partial cds. ).
Length = 500
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 166 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 218
>D30755-1|BAA06416.2| 636|Homo sapiens KIAA0113 protein.
Length = 636
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 301 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 353
>BC014008-1|AAH14008.1| 636|Homo sapiens TNIP1 protein protein.
Length = 636
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 301 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 353
>BC012133-1|AAH12133.1| 636|Homo sapiens TNFAIP3 interacting
protein 1 protein.
Length = 636
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 301 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 353
>AY012155-1|AAG42154.1| 636|Homo sapiens virion-associated
nuclear-shuttling protein protein.
Length = 636
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 301 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 353
>AJ011896-1|CAA09856.1| 635|Homo sapiens Naf1 beta protein protein.
Length = 635
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 301 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 353
>AJ011895-1|CAA09855.1| 636|Homo sapiens Naf1 alpha protein
protein.
Length = 636
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 301 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 353
>AB252982-1|BAF48799.1| 630|Homo sapiens Nef-associated factor 1
SNP protein.
Length = 630
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 301 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 353
>AB252981-1|BAF48798.1| 506|Homo sapiens Nef-associated factor 1
isoform 12 protein.
Length = 506
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 255 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 307
>AB252980-1|BAF48797.1| 499|Homo sapiens Nef-associated factor 1
isoform 11 protein.
Length = 499
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 255 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 307
>AB252979-1|BAF48796.1| 525|Homo sapiens Nef-associated factor 1
isoform 10 protein.
Length = 525
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 255 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 307
>AB252978-1|BAF48795.1| 499|Homo sapiens Nef-associated factor 1
isoform 9 protein.
Length = 499
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 255 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 307
>AB252977-1|BAF48794.1| 510|Homo sapiens Nef-associated factor 1
isoform 8 protein.
Length = 510
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 255 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 307
>AB252976-1|BAF48793.1| 526|Homo sapiens Nef-associated factor 1
isoform 7 protein.
Length = 526
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 255 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 307
>AB252973-1|BAF48790.1| 635|Homo sapiens Nef-associated factor 1
isoform 4 protein.
Length = 635
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 301 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 353
>AB252972-1|BAF48789.1| 636|Homo sapiens Nef-associated factor 1
isoform 3 protein.
Length = 636
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 301 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 353
>AB252971-1|BAF48788.1| 635|Homo sapiens Nef-associated factor 1
isoform 2 protein.
Length = 635
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 301 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 353
>AB252970-1|BAF48787.1| 636|Homo sapiens Nef-associated factor 1
isoform 1 protein.
Length = 636
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 301 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 353
>AB177544-1|BAF34947.1| 556|Homo sapiens NEF-associated factor 1
protein.
Length = 556
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 301 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 353
>AB177543-1|BAF34946.1| 572|Homo sapiens NEF-associated factor 1
protein.
Length = 572
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 468 KPTPLIQSRKAEAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELE 641
K +++ +++E ++ V+K+ + HF +K+QY+ K T ++Q L A L +T+LE
Sbjct: 301 KKVKMLEQQRSELLE-VNKQWDQHFRSMKQQYE---QKITELRQKL-ADLQKQVTDLE 353
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,411,671
Number of Sequences: 237096
Number of extensions: 2760490
Number of successful extensions: 4667
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4659
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16183591620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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