Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_L03
(1160 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93239-1|CAB07528.1| 512|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 34 0.22
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 34 0.22
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 34 0.22
U80454-6|AAB37879.1| 786|Caenorhabditis elegans Hypothetical pr... 33 0.38
AC024809-5|AAF59544.3| 287|Caenorhabditis elegans Hypothetical ... 32 0.67
Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical pr... 31 1.6
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 30 3.6
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 30 3.6
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.7
AF003385-4|AAB54244.1| 333|Caenorhabditis elegans Hypothetical ... 29 8.3
>Z93239-1|CAB07528.1| 512|Caenorhabditis elegans Hypothetical
protein H03A11.1 protein.
Length = 512
Score = 40.3 bits (90), Expect = 0.003
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +3
Query: 717 ILHAIKSSPIALVDNAPKGTQLKLLLILESKQKVLFKPKRYNLTEVIKGP---VYAGXDR 887
+LH + +SPI V GTQ+K + ++ ++ +FKP R+ + P ++ +R
Sbjct: 156 LLHDLNTSPIKHVHIMDGGTQVKFVFTFKNDKQAVFKPMRFG-RDYESDPNHFYFSDFER 214
Query: 888 YNSEVXAYYLGMVXNMRWIAPAV 956
+++E+ ++L V R P V
Sbjct: 215 HHAEIATFHLDRVLGFRRAIPTV 237
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 33.9 bits (74), Expect = 0.22
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 486 QSRKAEAMQNVHKEINDHFAHLKKQYKIKT---SKFTPVQQALIASLNSTITELENIWNT 656
QS+K E ++ + KEI + + + KT + F VQQ L +N E+E +
Sbjct: 957 QSQKQEELEKLQKEIQEKETTIARMTSSKTQFEAMFADVQQTLSKEINDKTEEIERLMER 1016
Query: 657 VDN 665
+D+
Sbjct: 1017 IDS 1019
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 33.9 bits (74), Expect = 0.22
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 486 QSRKAEAMQNVHKEINDHFAHLKKQYKIKT---SKFTPVQQALIASLNSTITELENIWNT 656
QS+K E ++ + KEI + + + KT + F VQQ L +N E+E +
Sbjct: 959 QSQKQEELEKLQKEIQEKETTIARMTSSKTQFEAMFADVQQTLSKEINDKTEEIERLMER 1018
Query: 657 VDN 665
+D+
Sbjct: 1019 IDS 1021
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 33.9 bits (74), Expect = 0.22
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 486 QSRKAEAMQNVHKEINDHFAHLKKQYKIKT---SKFTPVQQALIASLNSTITELENIWNT 656
QS+K E ++ + KEI + + + KT + F VQQ L +N E+E +
Sbjct: 959 QSQKQEELEKLQKEIQEKETTIARMTSSKTQFEAMFADVQQTLSKEINDKTEEIERLMER 1018
Query: 657 VDN 665
+D+
Sbjct: 1019 IDS 1021
>U80454-6|AAB37879.1| 786|Caenorhabditis elegans Hypothetical
protein T16A1.2 protein.
Length = 786
Score = 33.1 bits (72), Expect = 0.38
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +3
Query: 567 IKTSKFTPVQQALIASLNSTITELENIWNTVDNWVD 674
+K++K+TP+ ++L + T+ E+ + VD W D
Sbjct: 596 LKSNKYTPLLKSLFGNFRHTVLEIATFFYKVDTWAD 631
>AC024809-5|AAF59544.3| 287|Caenorhabditis elegans Hypothetical
protein Y53G8AR.5 protein.
Length = 287
Score = 32.3 bits (70), Expect = 0.67
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +3
Query: 501 EAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELENIWNTVDNWVDNE 680
E + + +EI D H+K+Q ++T+ F PV +A + N+ EN+ + N N+
Sbjct: 151 ECLTGLRQEIQDAQKHMKEQ--VETNIFCPVCRAQLTDSNTIHNYRENVQLMIKNCKKNQ 208
Query: 681 SLFPDK 698
+K
Sbjct: 209 KTLKNK 214
>Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical
protein W04D2.1b protein.
Length = 894
Score = 31.1 bits (67), Expect = 1.6
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +3
Query: 501 EAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELEN 644
+ ++ VH+E+ ++F ++ + + L+ S+N TI E EN
Sbjct: 692 DELERVHQEMQENFVFENRKSRYSMESLRVGWETLLTSINKTINEFEN 739
>Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical
protein W04D2.1a protein.
Length = 920
Score = 31.1 bits (67), Expect = 1.6
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +3
Query: 501 EAMQNVHKEINDHFAHLKKQYKIKTSKFTPVQQALIASLNSTITELEN 644
+ ++ VH+E+ ++F ++ + + L+ S+N TI E EN
Sbjct: 718 DELERVHQEMQENFVFENRKSRYSMESLRVGWETLLTSINKTINEFEN 765
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 405 SVFLLCLVLLNIYFFYNLSTTKPTPLIQSRKAEAMQNVHKEINDH 539
SVF++ +LL I FY + TT+ L Q + E KE+ H
Sbjct: 27 SVFVVLFLLLTILLFYFIFTTRDVYLSQKQALEEEDIKKKEVAAH 71
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 405 SVFLLCLVLLNIYFFYNLSTTKPTPLIQSRKAEAMQNVHKEINDH 539
SVF++ +LL I FY + TT+ L Q + E KE+ H
Sbjct: 27 SVFVVLFLLLTILLFYFIFTTRDVYLSQKQALEEEDIKKKEVAAH 71
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +3
Query: 435 NIYFFYNLSTTKPTPLIQSRKAEA----MQNVHKEINDHFAHLKKQYKIKTSKFTPVQQA 602
NI F + P+P + S KAE +VH++ N AH++++ ++ P Q
Sbjct: 148 NIVFQKSFEAAPPSP-VPSEKAELPATIQPSVHEQFNHRPAHVEEEIPLENHYAPPPHQQ 206
Query: 603 LIASLNSTIT 632
+ LN++ +
Sbjct: 207 IPDDLNTSFS 216
>AF003385-4|AAB54244.1| 333|Caenorhabditis elegans Hypothetical
protein R08F11.2 protein.
Length = 333
Score = 28.7 bits (61), Expect = 8.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 337 EYISLVKHAINIALCR*ITCLEYRSFCFV 423
EY + + H +N L +TCL Y SFCFV
Sbjct: 195 EYAN-IPHGVNNFLVVGLTCLLYVSFCFV 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,103,259
Number of Sequences: 27780
Number of extensions: 455984
Number of successful extensions: 1192
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3161640774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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