Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_L01
(1289 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.020
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.020
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.020
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 36 0.082
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.58
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 32 0.77
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 1.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.3
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.8
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.8
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.8
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.8
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 2.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 4.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 4.1
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 5.4
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 5.4
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 29 7.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 7.1
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 29 7.1
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 29 7.1
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 9.5
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.5 bits (83), Expect = 0.020
Identities = 53/220 (24%), Positives = 61/220 (27%), Gaps = 17/220 (7%)
Frame = +3
Query: 630 PPPHXXEXXQKTLXTGXXPTAPTGXPGXAXXNHPPXXPXA---XPGPXPXXXLXTGXRXX 800
PPP TG P PTG P P P A P P P TG
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Query: 801 XAXQXHXPXTATPGXXKVXSXATVXPQXXXKGLGXTPPNXPPXRXPPXXRPNPXXXDSGX 980
P T P+ G P PP PP P +S
Sbjct: 315 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPP-TGSPPTGSPPTGRPPRGGPGKSSEESSE 373
Query: 981 XXPSPXKXTPPXG--GHPRXXXQ-----RGETXXXXKTHGGGEXPXXNKXGGGXP--XPP 1133
P + P G G PR + R E ++ G P + G P PP
Sbjct: 374 SREGP-RGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPP 432
Query: 1134 ---XPTXXXHKQXXXA--XXXXXPPPXKXPPXXXXXXXGP 1238
PT +Q A PP PP GP
Sbjct: 433 TGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGP 472
Score = 36.3 bits (80), Expect = 0.047
Identities = 39/180 (21%), Positives = 47/180 (26%), Gaps = 4/180 (2%)
Frame = +3
Query: 684 PTAPTGXPGXAXXNHPPXXPXAXPGPXPXXXLXTGXRXXXAXQXHXPXTATPGXXKVXSX 863
P P G P A PP P A G P + P +P + S
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAA--GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 864 ATVXPQXXXKGLGXTPPNXPPXRXPPXXR---PNPXXXDSGXXXPSPXKXTPPXGGHPRX 1034
P G PP PP P P SP +PP G P
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 357
Query: 1035 XXQR-GETXXXXKTHGGGEXPXXNKXGGGXPXPPXPTXXXHKQXXXAXXXXXPPPXKXPP 1211
R G ++ E P GG P + + PP PP
Sbjct: 358 RPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPP 417
Score = 35.9 bits (79), Expect = 0.062
Identities = 32/120 (26%), Positives = 36/120 (30%), Gaps = 5/120 (4%)
Frame = +3
Query: 894 GLGXTPPNXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPP---XGGHPRXXXQRGE--TX 1058
G G PP PP +P +G P P +PP G P RG T
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 310
Query: 1059 XXXKTHGGGEXPXXNKXGGGXPXPPXPTXXXHKQXXXAXXXXXPPPXKXPPXXXXXXXGP 1238
GG P G G P PP +Q PP PP GP
Sbjct: 311 SLPPPQAGGSPP---PAGTGSPPPP---PRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP 364
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +2
Query: 611 PRKRXXPXPPPXGXTXKNTPXGXXPDSXXRXPRXGXXKPPSXPPPXXXRPXPRXXPXYRX 790
P + P PPP T P + P G PP PPP R P P
Sbjct: 291 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP--PPPRQKRQAPERSPPTGS 348
Query: 791 P 793
P
Sbjct: 349 P 349
Score = 29.1 bits (62), Expect = 7.1
Identities = 26/89 (29%), Positives = 30/89 (33%), Gaps = 2/89 (2%)
Frame = +3
Query: 879 QXXXKGLGXTPP-NXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPPXGGHPR-XXXQRGE 1052
Q +G PP PP PP + +P SG P P +PP PR
Sbjct: 222 QNGFRGKRQAPPAGSPP--PPPPPKGSPPLAGSGSPPPPPAAGSPPP---PRTGSPPPPP 276
Query: 1053 TXXXXKTHGGGEXPXXNKXGGGXPXPPXP 1139
T GG P G P PP P
Sbjct: 277 TGSPPPPPAGGSPPPPR--AGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.5 bits (83), Expect = 0.020
Identities = 53/220 (24%), Positives = 61/220 (27%), Gaps = 17/220 (7%)
Frame = +3
Query: 630 PPPHXXEXXQKTLXTGXXPTAPTGXPGXAXXNHPPXXPXA---XPGPXPXXXLXTGXRXX 800
PPP TG P PTG P P P A P P P TG
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Query: 801 XAXQXHXPXTATPGXXKVXSXATVXPQXXXKGLGXTPPNXPPXRXPPXXRPNPXXXDSGX 980
P T P+ G P PP PP P +S
Sbjct: 336 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPP-TGSPPTGSPPTGRPPRGGPGKSSEESSE 394
Query: 981 XXPSPXKXTPPXG--GHPRXXXQ-----RGETXXXXKTHGGGEXPXXNKXGGGXP--XPP 1133
P + P G G PR + R E ++ G P + G P PP
Sbjct: 395 SREGP-RGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPP 453
Query: 1134 ---XPTXXXHKQXXXA--XXXXXPPPXKXPPXXXXXXXGP 1238
PT +Q A PP PP GP
Sbjct: 454 TGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGP 493
Score = 36.3 bits (80), Expect = 0.047
Identities = 39/180 (21%), Positives = 47/180 (26%), Gaps = 4/180 (2%)
Frame = +3
Query: 684 PTAPTGXPGXAXXNHPPXXPXAXPGPXPXXXLXTGXRXXXAXQXHXPXTATPGXXKVXSX 863
P P G P A PP P A G P + P +P + S
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAA--GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 864 ATVXPQXXXKGLGXTPPNXPPXRXPPXXR---PNPXXXDSGXXXPSPXKXTPPXGGHPRX 1034
P G PP PP P P SP +PP G P
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 378
Query: 1035 XXQR-GETXXXXKTHGGGEXPXXNKXGGGXPXPPXPTXXXHKQXXXAXXXXXPPPXKXPP 1211
R G ++ E P GG P + + PP PP
Sbjct: 379 RPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPP 438
Score = 35.9 bits (79), Expect = 0.062
Identities = 32/120 (26%), Positives = 36/120 (30%), Gaps = 5/120 (4%)
Frame = +3
Query: 894 GLGXTPPNXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPP---XGGHPRXXXQRGE--TX 1058
G G PP PP +P +G P P +PP G P RG T
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 331
Query: 1059 XXXKTHGGGEXPXXNKXGGGXPXPPXPTXXXHKQXXXAXXXXXPPPXKXPPXXXXXXXGP 1238
GG P G G P PP +Q PP PP GP
Sbjct: 332 SLPPPQAGGSPP---PAGTGSPPPP---PRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP 385
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +2
Query: 611 PRKRXXPXPPPXGXTXKNTPXGXXPDSXXRXPRXGXXKPPSXPPPXXXRPXPRXXPXYRX 790
P + P PPP T P + P G PP PPP R P P
Sbjct: 312 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP--PPPRQKRQAPERSPPTGS 369
Query: 791 P 793
P
Sbjct: 370 P 370
Score = 29.1 bits (62), Expect = 7.1
Identities = 26/89 (29%), Positives = 30/89 (33%), Gaps = 2/89 (2%)
Frame = +3
Query: 879 QXXXKGLGXTPP-NXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPPXGGHPR-XXXQRGE 1052
Q +G PP PP PP + +P SG P P +PP PR
Sbjct: 243 QNGFRGKRQAPPAGSPP--PPPPPKGSPPLAGSGSPPPPPAAGSPPP---PRTGSPPPPP 297
Query: 1053 TXXXXKTHGGGEXPXXNKXGGGXPXPPXP 1139
T GG P G P PP P
Sbjct: 298 TGSPPPPPAGGSPPPPR--AGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.5 bits (83), Expect = 0.020
Identities = 53/220 (24%), Positives = 61/220 (27%), Gaps = 17/220 (7%)
Frame = +3
Query: 630 PPPHXXEXXQKTLXTGXXPTAPTGXPGXAXXNHPPXXPXA---XPGPXPXXXLXTGXRXX 800
PPP TG P PTG P P P A P P P TG
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Query: 801 XAXQXHXPXTATPGXXKVXSXATVXPQXXXKGLGXTPPNXPPXRXPPXXRPNPXXXDSGX 980
P T P+ G P PP PP P +S
Sbjct: 321 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPP-TGSPPTGSPPTGRPPRGGPGKSSEESSE 379
Query: 981 XXPSPXKXTPPXG--GHPRXXXQ-----RGETXXXXKTHGGGEXPXXNKXGGGXP--XPP 1133
P + P G G PR + R E ++ G P + G P PP
Sbjct: 380 SREGP-RGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPP 438
Query: 1134 ---XPTXXXHKQXXXA--XXXXXPPPXKXPPXXXXXXXGP 1238
PT +Q A PP PP GP
Sbjct: 439 TGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGP 478
Score = 36.3 bits (80), Expect = 0.047
Identities = 39/180 (21%), Positives = 47/180 (26%), Gaps = 4/180 (2%)
Frame = +3
Query: 684 PTAPTGXPGXAXXNHPPXXPXAXPGPXPXXXLXTGXRXXXAXQXHXPXTATPGXXKVXSX 863
P P G P A PP P A G P + P +P + S
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAA--GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 864 ATVXPQXXXKGLGXTPPNXPPXRXPPXXR---PNPXXXDSGXXXPSPXKXTPPXGGHPRX 1034
P G PP PP P P SP +PP G P
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 363
Query: 1035 XXQR-GETXXXXKTHGGGEXPXXNKXGGGXPXPPXPTXXXHKQXXXAXXXXXPPPXKXPP 1211
R G ++ E P GG P + + PP PP
Sbjct: 364 RPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPP 423
Score = 35.9 bits (79), Expect = 0.062
Identities = 32/120 (26%), Positives = 36/120 (30%), Gaps = 5/120 (4%)
Frame = +3
Query: 894 GLGXTPPNXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPP---XGGHPRXXXQRGE--TX 1058
G G PP PP +P +G P P +PP G P RG T
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 316
Query: 1059 XXXKTHGGGEXPXXNKXGGGXPXPPXPTXXXHKQXXXAXXXXXPPPXKXPPXXXXXXXGP 1238
GG P G G P PP +Q PP PP GP
Sbjct: 317 SLPPPQAGGSPP---PAGTGSPPPP---PRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP 370
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +2
Query: 611 PRKRXXPXPPPXGXTXKNTPXGXXPDSXXRXPRXGXXKPPSXPPPXXXRPXPRXXPXYRX 790
P + P PPP T P + P G PP PPP R P P
Sbjct: 297 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP--PPPRQKRQAPERSPPTGS 354
Query: 791 P 793
P
Sbjct: 355 P 355
Score = 29.1 bits (62), Expect = 7.1
Identities = 26/89 (29%), Positives = 30/89 (33%), Gaps = 2/89 (2%)
Frame = +3
Query: 879 QXXXKGLGXTPP-NXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPPXGGHPR-XXXQRGE 1052
Q +G PP PP PP + +P SG P P +PP PR
Sbjct: 228 QNGFRGKRQAPPAGSPP--PPPPPKGSPPLAGSGSPPPPPAAGSPPP---PRTGSPPPPP 282
Query: 1053 TXXXXKTHGGGEXPXXNKXGGGXPXPPXP 1139
T GG P G P PP P
Sbjct: 283 TGSPPPPPAGGSPPPPR--AGSPPPPPPP 309
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 35.5 bits (78), Expect = 0.082
Identities = 45/185 (24%), Positives = 45/185 (24%), Gaps = 10/185 (5%)
Frame = +3
Query: 672 TGXXPTAPTGXP------GXAXXNHPPXXPXAXPGPXPXXXLXTGXRXXXAXQXHXPXTA 833
TG P PTG P G A PP P P P
Sbjct: 40 TGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPP 99
Query: 834 TPGXXKVXSXATVXPQXXXKGLGXT---PPNXPPXRXPPXXRPNPXXXD-SGXXXPSPXK 1001
G T PQ G G PP P P P D SG S
Sbjct: 100 PKGTGTPPPPPTGEPQDL-SGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRP 158
Query: 1002 XTPPXGGHPRXXXQRGETXXXXKTHGGGEXPXXNKXGGGXPXPPXPTXXXHKQXXXAXXX 1181
PP G GE P G G P PP PT
Sbjct: 159 PPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTP-PPPPTGEPQDLSAEGYAS 217
Query: 1182 XXPPP 1196
PPP
Sbjct: 218 RRPPP 222
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.7 bits (71), Expect = 0.58
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +2
Query: 683 PDSXXRXPRXGXXKPPSXPPPXXXR-PXPRXXPXYRXPL 796
P R R G PP PPP R P PR P R P+
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPM 162
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 909 PPNXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPP 1013
PP PP R PP P+P PSP PP
Sbjct: 151 PPRSPPPRRPPMTPPSPQRRPP-RTPPSPEPRNPP 184
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +2
Query: 629 PXPPPXGXTXKNTPXGXXPDSXXRXPRXGXXKPPSXPPPXXXRPXPRXXP 778
P PPP P P P +PP PP R PR P
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPP 188
Score = 29.1 bits (62), Expect = 7.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 906 TPPNXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPP 1013
TPP+ P R PP P+P + PSP PP
Sbjct: 163 TPPS--PQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.77
Identities = 26/116 (22%), Positives = 29/116 (25%)
Frame = +3
Query: 900 GXTPPNXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPPXGGHPRXXXQRGETXXXXKTHG 1079
G P P P P D P P P G P Q G +
Sbjct: 181 GPPGPPGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGPPGP-PGNDGQPGAPGQDGQPGA 239
Query: 1080 GGEXPXXNKXGGGXPXPPXPTXXXHKQXXXAXXXXXPPPXKXPPXXXXXXXGPXXP 1247
G + G G PP P + PP PP GP P
Sbjct: 240 PGTNTVNSPGGPGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQP 295
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 31.9 bits (69), Expect = 1.0
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = -1
Query: 1157 FVXXXXGXGGXGXPPPXFIXXWXFPPPVGFRXXXCFPPLGXPXXVPPXGG 1008
F+ G GG PPP F PPP+ P G P PP G
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSG 122
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 629 PXPPPXGXTXKNTPXGXXPDSXXRXPRXGXXKPPSXPPPXXXRPXPRXXP 778
P PPP G T P P PP PPP P P P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 31.1 bits (67), Expect = 1.8
Identities = 26/97 (26%), Positives = 26/97 (26%)
Frame = +3
Query: 921 PPXRXPPXXRPNPXXXDSGXXXPSPXKXTPPXGGHPRXXXQRGETXXXXKTHGGGEXPXX 1100
PP P P G P P PP G P G GG P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI----SGGPPPPP 762
Query: 1101 NKXGGGXPXPPXPTXXXHKQXXXAXXXXXPPPXKXPP 1211
GG P PP P K PPP P
Sbjct: 763 PPPGGCPPPPPPPPPGGFK----GGPPPPPPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 629 PXPPPXGXTXKNTPXGXXPDSXXRXPRXGXXKPPSXPPPXXXRPXPRXXP 778
P PPP G T P P PP PPP P P P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 31.1 bits (67), Expect = 1.8
Identities = 26/97 (26%), Positives = 26/97 (26%)
Frame = +3
Query: 921 PPXRXPPXXRPNPXXXDSGXXXPSPXKXTPPXGGHPRXXXQRGETXXXXKTHGGGEXPXX 1100
PP P P G P P PP G P G GG P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI----SGGPPPPP 762
Query: 1101 NKXGGGXPXPPXPTXXXHKQXXXAXXXXXPPPXKXPP 1211
GG P PP P K PPP P
Sbjct: 763 PPPGGCPPPPPPPPPGGFK----GGPPPPPPPGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 629 PXPPPXGXTXKNTPXGXXPDSXXRXPRXGXXKPPSXPPPXXXRPXPRXXP 778
P PPP G T P P PP PPP P P P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 31.1 bits (67), Expect = 1.8
Identities = 26/97 (26%), Positives = 26/97 (26%)
Frame = +3
Query: 921 PPXRXPPXXRPNPXXXDSGXXXPSPXKXTPPXGGHPRXXXQRGETXXXXKTHGGGEXPXX 1100
PP P P G P P PP G P G GG P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI----SGGPPPPP 345
Query: 1101 NKXGGGXPXPPXPTXXXHKQXXXAXXXXXPPPXKXPP 1211
GG P PP P K PPP P
Sbjct: 346 PPPGGCPPPPPPPPPGGFK----GGPPPPPPPGMFAP 378
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical protein
W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.8
Identities = 25/103 (24%), Positives = 27/103 (26%), Gaps = 3/103 (2%)
Frame = +3
Query: 912 PNXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPPXGGHPRXXXQRGETXXXXKTHGGGEX 1091
P PP P P P D P+ P G P G G GE
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSG-PGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
Query: 1092 PXXNKXGGGXP---XPPXPTXXXHKQXXXAXXXXXPPPXKXPP 1211
+ G G P PP P P K PP
Sbjct: 210 GASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPP 252
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 1.8
Identities = 25/103 (24%), Positives = 27/103 (26%), Gaps = 3/103 (2%)
Frame = +3
Query: 912 PNXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPPXGGHPRXXXQRGETXXXXKTHGGGEX 1091
P PP P P P D P+ P G P G G GE
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSG-PGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
Query: 1092 PXXNKXGGGXP---XPPXPTXXXHKQXXXAXXXXXPPPXKXPP 1211
+ G G P PP P P K PP
Sbjct: 210 GASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPP 252
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 2 (col-2) gene, complete cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 1.8
Identities = 25/103 (24%), Positives = 27/103 (26%), Gaps = 3/103 (2%)
Frame = +3
Query: 912 PNXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPPXGGHPRXXXQRGETXXXXKTHGGGEX 1091
P PP P P P D P+ P G P G G GE
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSG-PGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
Query: 1092 PXXNKXGGGXP---XPPXPTXXXHKQXXXAXXXXXPPPXKXPP 1211
+ G G P PP P P K PP
Sbjct: 210 GASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPP 252
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.8
Identities = 25/103 (24%), Positives = 27/103 (26%), Gaps = 3/103 (2%)
Frame = +3
Query: 912 PNXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPPXGGHPRXXXQRGETXXXXKTHGGGEX 1091
P PP P P P D P+ P G P G G GE
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSG-PGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
Query: 1092 PXXNKXGGGXP---XPPXPTXXXHKQXXXAXXXXXPPPXKXPP 1211
+ G G P PP P P K PP
Sbjct: 210 GASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPP 252
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 30.7 bits (66), Expect = 2.3
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = +2
Query: 629 PXPPPXGXTXKNTPXGXXPDSXXRXPRXGXXKPPSXPPPXXXRPXPRXXPXYRXP 793
P PPP G T P P + P + PP RP P P R P
Sbjct: 293 PQPPPRGSTA--APGTRAPPATRAPPATRAPPATTRAPPATTRPAPASQPPVREP 345
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 4.1
Identities = 38/148 (25%), Positives = 44/148 (29%), Gaps = 8/148 (5%)
Frame = +3
Query: 606 TGRVNGXLPPPHXXEXXQKTLXTGXXPTAPTGXPGXAXXNHPPXXPXAXPGPXPXXXLXT 785
TGR G PPP ++ G P P P PP P P P +
Sbjct: 238 TGRP-GYQPPP--LMGMAQSGYQGQYPPVPPPPPSVTPMP-PPMPPTPGMTPRPPPPPSS 293
Query: 786 GXRXXXAXQXHXPXTATPGXXKVXSXATVXP--QXXXKGLGXTPPNXPPXR-----XPPX 944
G P TPG + P + G+G PP PP PP
Sbjct: 294 GM---WPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
Query: 945 XRPNPXXXDSGXXXPSPXKXTP-PXGGH 1025
P G P P P P GH
Sbjct: 351 PPPRYPSAGPGMYPPPPPSRPPAPPSGH 378
Score = 29.1 bits (62), Expect = 7.1
Identities = 30/122 (24%), Positives = 37/122 (30%), Gaps = 4/122 (3%)
Frame = +3
Query: 675 GXXPTAPTGXPGX--AXXNHPPXXPXAXPGPXPXXXLXTGXRXXXAXQXHXPXTATPGXX 848
G P PG A H P P P +G + P + TP
Sbjct: 217 GVPANTPLAMPGVHAAIAAHATGRPGYQPPPL-MGMAQSGYQGQYPPVPPPPPSVTPMPP 275
Query: 849 KVXSXATVXPQXXXK-GLGXTPPNXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPP-XGG 1022
+ + P+ G PP PP PP P P P P + PP GG
Sbjct: 276 PMPPTPGMTPRPPPPPSSGMWPPPPPP---PPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 332
Query: 1023 HP 1028
P
Sbjct: 333 MP 334
Score = 29.1 bits (62), Expect = 7.1
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +2
Query: 611 PRKRXXPXPPPXGXTXKNTPXGXXPDSXXRXPRXGXXKPPSXPPPXXXRPXPRXXPXYRX 790
P P PPP T TP P P G PP PPP P P P
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPP------PSSGMW-PPPPPPPPGRTPGPPGMPGMPP 318
Query: 791 P 793
P
Sbjct: 319 P 319
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 4.1
Identities = 38/148 (25%), Positives = 44/148 (29%), Gaps = 8/148 (5%)
Frame = +3
Query: 606 TGRVNGXLPPPHXXEXXQKTLXTGXXPTAPTGXPGXAXXNHPPXXPXAXPGPXPXXXLXT 785
TGR G PPP ++ G P P P PP P P P +
Sbjct: 248 TGRP-GYQPPP--LMGMAQSGYQGQYPPVPPPPPSVTPMP-PPMPPTPGMTPRPPPPPSS 303
Query: 786 GXRXXXAXQXHXPXTATPGXXKVXSXATVXP--QXXXKGLGXTPPNXPPXR-----XPPX 944
G P TPG + P + G+G PP PP PP
Sbjct: 304 GM---WPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
Query: 945 XRPNPXXXDSGXXXPSPXKXTP-PXGGH 1025
P G P P P P GH
Sbjct: 361 PPPRYPSAGPGMYPPPPPSRPPAPPSGH 388
Score = 29.1 bits (62), Expect = 7.1
Identities = 30/122 (24%), Positives = 37/122 (30%), Gaps = 4/122 (3%)
Frame = +3
Query: 675 GXXPTAPTGXPGX--AXXNHPPXXPXAXPGPXPXXXLXTGXRXXXAXQXHXPXTATPGXX 848
G P PG A H P P P +G + P + TP
Sbjct: 227 GVPANTPLAMPGVHAAIAAHATGRPGYQPPPL-MGMAQSGYQGQYPPVPPPPPSVTPMPP 285
Query: 849 KVXSXATVXPQXXXK-GLGXTPPNXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPP-XGG 1022
+ + P+ G PP PP PP P P P P + PP GG
Sbjct: 286 PMPPTPGMTPRPPPPPSSGMWPPPPPP---PPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 342
Query: 1023 HP 1028
P
Sbjct: 343 MP 344
Score = 29.1 bits (62), Expect = 7.1
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +2
Query: 611 PRKRXXPXPPPXGXTXKNTPXGXXPDSXXRXPRXGXXKPPSXPPPXXXRPXPRXXPXYRX 790
P P PPP T TP P P G PP PPP P P P
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPP------PSSGMW-PPPPPPPPGRTPGPPGMPGMPP 328
Query: 791 P 793
P
Sbjct: 329 P 329
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical protein
C02C6.1a protein.
Length = 830
Score = 29.5 bits (63), Expect = 5.4
Identities = 22/80 (27%), Positives = 26/80 (32%), Gaps = 3/80 (3%)
Frame = +1
Query: 901 GXPPPTXPRXXXRPXXA-PTPXXXTXAXXXQAXXNXXPPXGGTXXGXPNGGKXXXXRKPT 1077
G PP P RP + P+P PP GG P G +
Sbjct: 745 GDQPPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
Query: 1078 GGGKXQXXI--KXGGGXPXP 1131
GGG I + G G P P
Sbjct: 805 GGGMYPPLIPTRPGPGGPPP 824
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.5 bits (63), Expect = 5.4
Identities = 22/80 (27%), Positives = 26/80 (32%), Gaps = 3/80 (3%)
Frame = +1
Query: 901 GXPPPTXPRXXXRPXXA-PTPXXXTXAXXXQAXXNXXPPXGGTXXGXPNGGKXXXXRKPT 1077
G PP P RP + P+P PP GG P G +
Sbjct: 745 GDQPPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
Query: 1078 GGGKXQXXI--KXGGGXPXP 1131
GGG I + G G P P
Sbjct: 805 GGGMYPPLIPTRPGPGGPPP 824
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/41 (29%), Positives = 16/41 (39%)
Frame = +3
Query: 909 PPNXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPPXGGHPR 1031
PP PP PP + NP + P + PP P+
Sbjct: 965 PPPVPPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPPRPK 1005
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 7.1
Identities = 18/69 (26%), Positives = 22/69 (31%)
Frame = +3
Query: 822 PXTATPGXXKVXSXATVXPQXXXKGLGXTPPNXPPXRXPPXXRPNPXXXDSGXXXPSPXK 1001
P ++TP S + P PP PP P P P G P +
Sbjct: 684 PTSSTPSDTPAPSTSVPPPTSVQPPQPQQPPQGPPGPPGPQQHPGPYPGYPGYGPPGAMR 743
Query: 1002 XTPPXGGHP 1028
PP G P
Sbjct: 744 --PPAGFAP 750
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/41 (29%), Positives = 16/41 (39%)
Frame = +3
Query: 909 PPNXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPPXGGHPR 1031
PP PP PP + NP + P + PP P+
Sbjct: 965 PPPVPPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPPRPK 1005
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/41 (29%), Positives = 16/41 (39%)
Frame = +3
Query: 909 PPNXPPXRXPPXXRPNPXXXDSGXXXPSPXKXTPPXGGHPR 1031
PP PP PP + NP + P + PP P+
Sbjct: 965 PPPVPPREAPPIPKRNPPPLGAPPKVPEGARAPPPLPPRPK 1005
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/70 (24%), Positives = 23/70 (32%)
Frame = +2
Query: 584 PAXXXXKDGPRKRXXPXPPPXGXTXKNTPXGXXPDSXXRXPRXGXXKPPSXPPPXXXRPX 763
P + P+ P P P + + +P P P +PP P P RP
Sbjct: 212 PGPVDPSEDPKPSEPPSPGPVDPSDEPSPSD--PPGPPGPPGPPTRRPPGPPGPPTRRPP 269
Query: 764 PRXXPXYRXP 793
P R P
Sbjct: 270 GPPGPPTRRP 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.139 0.458
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,642,726
Number of Sequences: 27780
Number of extensions: 304607
Number of successful extensions: 885
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3610322468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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