Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_K21
         (1176 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   5.7  
AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione S-tran...    24   7.5  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   9.9  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 5.7
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
 Frame = +1

Query: 511  ARRNRKMALQKKRRAKQVRQNFNLDLWGKDLPDSKTIPSTLCDEFIPPQAQLHNVLPEQR 690
            ARR R+ A +++RRA++ R+          L  S +  +T   E   P+ +   V P++R
Sbjct: 1065 ARRERRNARRRERRARE-RE---AQQQNPSLVFSASSEATEGRESAHPERR-EQVRPQRR 1119

Query: 691  LRQKPPLAQTL-----VTRAAVXVPHPXVSYNP 774
            +RQ  P  + +     VT+ A  +     S NP
Sbjct: 1120 IRQHMPQQKEVVELSDVTQYATAISEDVYSSNP 1152


>AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione
           S-transferase e8 protein.
          Length = 217

 Score = 24.2 bits (50), Expect = 7.5
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = +1

Query: 601 LPDSKTIPSTLCDEFIPPQAQLHNVLPEQRLRQK 702
           L DS  I   LCD F PP   L   LP+   R K
Sbjct: 64  LTDSHAILVYLCDTFAPPGHTL--ALPDALTRAK 95


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.8 bits (49), Expect = 9.9
 Identities = 12/54 (22%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +1

Query: 193 EDQRLEERLGKFETKPDSEIFIIDTGGDGIKTEDKDI-KPISLKKLRRSKLGEF 351
           E  R+E++L +FE+ P S++ +  T    +    + + +     ++ R  LG++
Sbjct: 496 ETTRIEKQLEQFESAPRSKLAVYGTNMPALVARIRQLHQQGQFSEMPRGPLGQY 549


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 771,937
Number of Sequences: 2352
Number of extensions: 14517
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 132842775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)