Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_K21
(1176 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132948-25|CAC51048.1| 438|Caenorhabditis elegans Hypothetical... 39 0.006
U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical pr... 35 0.13
U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical p... 33 0.30
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 30 3.6
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 30 3.6
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 30 3.6
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 30 3.6
AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical ... 29 4.8
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 29 6.4
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 29 6.4
AC084197-3|AAN63427.1| 173|Caenorhabditis elegans Histone h1 li... 29 6.4
AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical ... 29 6.4
>AL132948-25|CAC51048.1| 438|Caenorhabditis elegans Hypothetical
protein Y39B6A.33 protein.
Length = 438
Score = 39.1 bits (87), Expect = 0.006
Identities = 57/233 (24%), Positives = 93/233 (39%), Gaps = 2/233 (0%)
Frame = +1
Query: 151 WRKHCDIKDVENFLE-DQRLEERLGKFETKPDSEIFIIDTGGDGIKTEDKDIKPISLKKL 327
WRK +I D+E+ + R G D ++FI+D T +K + P L K
Sbjct: 20 WRKGTNIDDIEDSIHIKSRQAATGGVISEMKDEDLFIVDRTA----TANKPVVP-KLTKK 74
Query: 328 RRSKLGEFPKCFEILLPDSKVQDPNTKRNTVKPVGSKPTAFSKLTDKRKYEKGIYQKKIE 507
+++ L K+ T+ + P KP+ SK I +K +
Sbjct: 75 QQAAL-------------EKITKNITQEHVTLP---KPSTTSK----------ILKKPAK 108
Query: 508 DARRNRKMALQK-KRRAKQVRQNFNLDLWGKDLPDSKTIPSTLCDEFIPPQAQLHNVLPE 684
R N +AL+K + A + N D+W DL + IP + + +A H +
Sbjct: 109 LPRGNAILALKKGPKAAAPAAKKKNFDVWTTDL--TPKIPKSKLEN---QEAAEHFLKVV 163
Query: 685 QRLRQKPPLAQTLVTRAAVXVPHPXVSYNPSYQEHQELLXEVVXXEXXLIXKE 843
++ + K P AV + SYNP E+QE + ++ E LI E
Sbjct: 164 KKKQPKTPGKSITSLLPAVQIAEGGASYNPESAEYQEYVAKIAGEEQKLIDHE 216
>U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical
protein C45G9.9 protein.
Length = 294
Score = 34.7 bits (76), Expect = 0.13
Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 4/140 (2%)
Frame = +1
Query: 370 LLPDSK-VQDPNTKRNTVKPVGSKPTAFSKLTDKRKYEKGIYQ--KKIEDARRNRKMALQ 540
+ PD K + P + T +KP SK + KRK +KG++ K +R++K A +
Sbjct: 5 ITPDKKKLVSPKPTKTTSDKSKTKPRRSSKTSKKRKSKKGLFGCCAKKRKTKRSKKSAKR 64
Query: 541 KKRRAKQVRQNFNLDLWGKDLPDSKTIPSTLCDEFIPPQAQLHNVLPEQR-LRQKPPLAQ 717
KR A + K P PS + +P QAQ P Q + +
Sbjct: 65 TKRSAPKKAP--------KKAP--MKAPSKPAAKLVPQQAQASLQKPIQSGIVDADATVK 114
Query: 718 TLVTRAAVXVPHPXVSYNPS 777
T+V R +P V P+
Sbjct: 115 TVVPRPPTPIPPTGVKPEPA 134
>U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical
protein C45G9.4 protein.
Length = 292
Score = 33.5 bits (73), Expect = 0.30
Identities = 37/140 (26%), Positives = 56/140 (40%), Gaps = 4/140 (2%)
Frame = +1
Query: 370 LLPDSK-VQDPNTKRNTVKPVGSKPTAFSKLTDKRKYEKGIYQ--KKIEDARRNRKMALQ 540
+ PD K + P + T +KP SK + KRK +KG++ K +R++K A +
Sbjct: 5 ITPDKKKLVSPKPTKTTSDKSKTKPRRSSKTSKKRKSKKGLFGCCAKKRKTKRSKKSAKR 64
Query: 541 KKRRAKQVRQNFNLDLWGKDLPDSKTIPSTLCDEFIPPQAQLHNVLPEQR-LRQKPPLAQ 717
KR A K P + + IP QAQ P Q + A+
Sbjct: 65 TKRSAP------------KKAPKKAPMKAPSKPAAIPQQAQASLQKPIQSGIVDADAKAK 112
Query: 718 TLVTRAAVXVPHPXVSYNPS 777
T+V R +P V P+
Sbjct: 113 TVVPRPPTPIPPTGVKPEPA 132
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.9 bits (64), Expect = 3.6
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
Frame = +1
Query: 235 KPDSEIFIIDTGGDGIKTEDKDIKPISLKK-LRRSKLGEFPKCFEILLPDSKVQDPNTKR 411
KP+ + +++ G K D+ K L+ +KL E + F+ + V+ ++
Sbjct: 158 KPEEILGMVEEAA-GTKMYDQKKKDAEKTMFLKDAKLKEVDRIFQSSIDPRMVKFREDRK 216
Query: 412 NTVKPVGSKPTAFSKLTDKRKYEKGIYQKKIEDARRNRKMALQKKRRAKQVRQNFN-LDL 588
N V+ K K RKYE Y + E +++ K K+ + + + FN LDL
Sbjct: 217 NMVEVTRLKKL---KENFSRKYEAFQYFQTCEAVKKSAKEIEDAKKGIEDLGEKFNQLDL 273
Query: 589 WGKDLPDSK 615
K+ D K
Sbjct: 274 DLKNKEDEK 282
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.9 bits (64), Expect = 3.6
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
Frame = +1
Query: 235 KPDSEIFIIDTGGDGIKTEDKDIKPISLKK-LRRSKLGEFPKCFEILLPDSKVQDPNTKR 411
KP+ + +++ G K D+ K L+ +KL E + F+ + V+ ++
Sbjct: 158 KPEEILGMVEEAA-GTKMYDQKKKDAEKTMFLKDAKLKEVDRIFQSSIDPRMVKFREDRK 216
Query: 412 NTVKPVGSKPTAFSKLTDKRKYEKGIYQKKIEDARRNRKMALQKKRRAKQVRQNFN-LDL 588
N V+ K K RKYE Y + E +++ K K+ + + + FN LDL
Sbjct: 217 NMVEVTRLKKL---KENFSRKYEAFQYFQTCEAVKKSAKEIEDAKKGIEDLGEKFNQLDL 273
Query: 589 WGKDLPDSK 615
K+ D K
Sbjct: 274 DLKNKEDEK 282
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 29.9 bits (64), Expect = 3.6
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
Frame = +1
Query: 235 KPDSEIFIIDTGGDGIKTEDKDIKPISLKK-LRRSKLGEFPKCFEILLPDSKVQDPNTKR 411
KP+ + +++ G K D+ K L+ +KL E + F+ + V+ ++
Sbjct: 158 KPEEILGMVEEAA-GTKMYDQKKKDAEKTMFLKDAKLKEVDRIFQSSIDPRMVKFREDRK 216
Query: 412 NTVKPVGSKPTAFSKLTDKRKYEKGIYQKKIEDARRNRKMALQKKRRAKQVRQNFN-LDL 588
N V+ K K RKYE Y + E +++ K K+ + + + FN LDL
Sbjct: 217 NMVEVTRLKKL---KENFSRKYEAFQYFQTCEAVKKSAKEIEDAKKGIEDLGEKFNQLDL 273
Query: 589 WGKDLPDSK 615
K+ D K
Sbjct: 274 DLKNKEDEK 282
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.9 bits (64), Expect = 3.6
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
Frame = +1
Query: 235 KPDSEIFIIDTGGDGIKTEDKDIKPISLKK-LRRSKLGEFPKCFEILLPDSKVQDPNTKR 411
KP+ + +++ G K D+ K L+ +KL E + F+ + V+ ++
Sbjct: 158 KPEEILGMVEEAA-GTKMYDQKKKDAEKTMFLKDAKLKEVDRIFQSSIDPRMVKFREDRK 216
Query: 412 NTVKPVGSKPTAFSKLTDKRKYEKGIYQKKIEDARRNRKMALQKKRRAKQVRQNFN-LDL 588
N V+ K K RKYE Y + E +++ K K+ + + + FN LDL
Sbjct: 217 NMVEVTRLKKL---KENFSRKYEAFQYFQTCEAVKKSAKEIEDAKKGIEDLGEKFNQLDL 273
Query: 589 WGKDLPDSK 615
K+ D K
Sbjct: 274 DLKNKEDEK 282
>AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical
protein Y60A3A.14 protein.
Length = 362
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -3
Query: 541 FAMPFSCSCAHLLFSSDKYPSHIFV 467
F +PF+ +C +LF +KYPS +FV
Sbjct: 179 FLLPFT-ACTAILFYFNKYPSRVFV 202
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
protein B0496.3a protein.
Length = 1551
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 376 PDSKVQDPNTKRNTVKPVGSKPTAFSKLTDK 468
P+ + +DP T R T KP S+ +F + D+
Sbjct: 490 PEQQPEDPKTARGTSKPADSRAPSFVPVKDR 520
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
protein B0496.3b protein.
Length = 1592
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 376 PDSKVQDPNTKRNTVKPVGSKPTAFSKLTDK 468
P+ + +DP T R T KP S+ +F + D+
Sbjct: 490 PEQQPEDPKTARGTSKPADSRAPSFVPVKDR 520
>AC084197-3|AAN63427.1| 173|Caenorhabditis elegans Histone h1 like
protein 2, isoformb protein.
Length = 173
Score = 29.1 bits (62), Expect = 6.4
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +1
Query: 307 PISLKKLRRSKLGEFPKCFEILLPDSKVQDPNTKRNTVKPVGSKPTAFSKLTDKRKYEKG 486
P K +SK + PK ++ + T T KPV KP A T ++K +K
Sbjct: 65 PTKAPKAPKSKTTKEPKA-KVAAAHPPFINMVTAAATKKPVAKKPVAKKAATGEKKAKKT 123
Query: 487 IYQKKIEDARRNRKMALQ-KKRRAKQVRQN 573
KK D + K + K AK+V ++
Sbjct: 124 TVAKKTGDKVKKAKSPKKIAKPAAKKVAKS 153
>AC024741-1|AAK68394.3| 789|Caenorhabditis elegans Hypothetical
protein R05G9R.1 protein.
Length = 789
Score = 29.1 bits (62), Expect = 6.4
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Frame = +1
Query: 301 IKPISLKKLRRSKLGEFPKCF---------EILLPDSKVQDPNTKRNTVKPVGSKPTAFS 453
++P +L+K +++ G + F EIL S ++ P T + + TA
Sbjct: 139 VRPRALRKFSKNRYGISKRKFLKTVRTGRAEIL--HSPIEPPTTSLSPFIVLHHGGTAIQ 196
Query: 454 KLTDKRKYEKGIYQKKIEDARRNRKMALQKKRRAKQVRQNF 576
+ + +Q DAR NRK KKRR ++ + +F
Sbjct: 197 TSSQPPAFSPFTFQSIDFDARMNRKFRRNKKRRLRKKKHDF 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,206,142
Number of Sequences: 27780
Number of extensions: 344421
Number of successful extensions: 1261
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3213813064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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