Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_K20
(1215 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical pr... 40 0.005
U41993-4|AAA83446.4| 574|Caenorhabditis elegans Hypothetical pr... 29 6.6
U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical p... 29 8.8
U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical pr... 29 8.8
U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical pr... 29 8.8
U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical pr... 29 8.8
U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical pr... 29 8.8
U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical pr... 29 8.8
U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical pr... 29 8.8
U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical pr... 29 8.8
>U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical protein
T19D7.1 protein.
Length = 497
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +1
Query: 868 REICKCYKNRSKNDKTESLDGTNCTIPDWSNITVXNDQSPIKSLSNMVSXPYGYFXYTYN 1047
R+ICK KNR + + GTN T+ D++N+ + IKSL ++ P+ YF ++YN
Sbjct: 214 RKICKFIKNRQLD---RIMAGTNTTL-DFTNLNACHKTVRIKSLLHIFWLPHVYFPFSYN 269
>U41993-4|AAA83446.4| 574|Caenorhabditis elegans Hypothetical
protein F44A2.3 protein.
Length = 574
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +2
Query: 449 VETGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLGDHMMLIQLQLSTLHSSS 628
+E G++S R N M L + + LSG+S L L + +HM + Q + +
Sbjct: 161 IENGIVSARVAN--MGLLTDTINQKFGSVLSGQSRLQLEEAICEHMNRLTQQHFSTRLAR 218
Query: 629 CPRSL 643
PRSL
Sbjct: 219 IPRSL 223
>U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical
protein W02C12.3g protein.
Length = 437
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 455 TGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLG 577
+G LS+ NT + S ND++ N+F++ +P + +G
Sbjct: 369 SGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVG 409
>U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical
protein W02C12.3h protein.
Length = 361
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 455 TGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLG 577
+G LS+ NT + S ND++ N+F++ +P + +G
Sbjct: 232 SGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVG 272
>U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical
protein W02C12.3a protein.
Length = 498
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 455 TGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLG 577
+G LS+ NT + S ND++ N+F++ +P + +G
Sbjct: 369 SGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVG 409
>U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical
protein W02C12.3f protein.
Length = 473
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 455 TGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLG 577
+G LS+ NT + S ND++ N+F++ +P + +G
Sbjct: 344 SGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVG 384
>U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical
protein W02C12.3d protein.
Length = 464
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 455 TGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLG 577
+G LS+ NT + S ND++ N+F++ +P + +G
Sbjct: 335 SGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVG 375
>U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical
protein W02C12.3e protein.
Length = 439
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 455 TGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLG 577
+G LS+ NT + S ND++ N+F++ +P + +G
Sbjct: 310 SGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVG 350
>U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical
protein W02C12.3c protein.
Length = 524
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 455 TGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLG 577
+G LS+ NT + S ND++ N+F++ +P + +G
Sbjct: 395 SGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVG 435
>U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical
protein W02C12.3b protein.
Length = 499
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 455 TGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLG 577
+G LS+ NT + S ND++ N+F++ +P + +G
Sbjct: 370 SGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVG 410
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,693,925
Number of Sequences: 27780
Number of extensions: 339015
Number of successful extensions: 1121
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3349461018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -