Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_K20
         (1215 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    24   3.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   3.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   4.1  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   5.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   7.1  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 874 ICKCYKNRSKNDKTESLDGTNCTIPDWSNITVXNDQSPIKSL 999
           ICKC+  R  N      DG        S + + ND+SP  S+
Sbjct: 77  ICKCFCKRRTNTLRRGSDG--------SQLAMRNDRSPSYSM 110


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 874 ICKCYKNRSKNDKTESLDGTNCTIPDWSNITVXNDQSPIKSL 999
           ICKC+  R  N      DG        S + + ND+SP  S+
Sbjct: 525 ICKCFCKRRTNTLRRGSDG--------SQLAMRNDRSPSYSM 558


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -1

Query: 546 LPLKKSLTWVSFKDSNACITVFS 478
           +P+ K   + +F+D  ACI++ +
Sbjct: 161 IPVTKKGVYFAFRDQGACISILA 183


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = +2

Query: 698 NKDSKDSNHQNNTQKSEPETNSPEKEKSN 784
           N D++D+NH N+       ++  + + +N
Sbjct: 416 NFDNQDNNHYNHNHNQARHSSKSDNQNNN 444



 Score = 22.2 bits (45), Expect = 9.4
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = +2

Query: 695 DNKDSKDSNHQNNTQKSEPETNSPEKEKSN 784
           DN+D+   NH +N  +   ++++    + N
Sbjct: 418 DNQDNNHYNHNHNQARHSSKSDNQNNNQHN 447


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 995 DLIGDWSFXTVMFD 954
           ++ G+WSF T+M D
Sbjct: 102 EISGNWSFGTIMCD 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,274
Number of Sequences: 438
Number of extensions: 4139
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 41572845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)