Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_K19
         (1228 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    23   4.7  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    23   4.7  

>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 243 SQHKKXKVFHSSRQLVKQRNPSW 311
           + H+K  V    R L+K+RN  W
Sbjct: 76  NDHQKVSVEKVIRFLIKERNSDW 98


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 243 SQHKKXKVFHSSRQLVKQRNPSW 311
           + H+K  V    R L+K+RN  W
Sbjct: 76  NDHQKVSVEKVIRFLIKERNSDW 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,720
Number of Sequences: 336
Number of extensions: 3819
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35863589
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)