Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_K08
         (1181 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...   174   3e-42
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...   105   2e-21
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    91   7e-17
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ...    65   4e-09
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    60   1e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ...    49   2e-04
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0...    48   4e-04
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0...    40   0.17 
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE...    36   2.7  

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score =  174 bits (424), Expect = 3e-42
 Identities = 84/112 (75%), Positives = 88/112 (78%)
 Frame = +1

Query: 631 ASKRPEXVKRPRCWXFSIGXAPLTSITKIDAQVXGGETRQDYKDTRRFPLKAPSCALLFR 810
           + K+     + RC  FSIG APLTSITKIDAQV GGETRQDYKDTRRFPL+APSCALLFR
Sbjct: 2   SKKQSTGTSQRRC-RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFR 60

Query: 811 PCRLPDTCPPFSLREAWRFLIXHAVGISXRGRSSAPXXAGXTNPXXXPTGGP 966
           PCRLPDTCPPFSLREAWRFLI HAVGIS R RS AP  A  TNP   PT  P
Sbjct: 61  PCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAP 112


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score =  105 bits (252), Expect = 2e-21
 Identities = 63/112 (56%), Positives = 68/112 (60%)
 Frame = +1

Query: 490 GALPXPRXLTRCXRSXGCGXRXQLTQRX*YGYPXNXGITQEKTCEQKASKRPEXVKRPRC 669
           G +P PR LTR  RS GCG R +LT           G   E T  +K   + E   RPR 
Sbjct: 34  GDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT--RKTLSKEEI--RPRR 81

Query: 670 WXFSIGXAPLTSITKIDAQVXGGETRQDYKDTRRFPLKAPSCALLFRPCRLP 825
             FSIG APLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P  LP
Sbjct: 82  SRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 90.6 bits (215), Expect = 7e-17
 Identities = 43/54 (79%), Positives = 45/54 (83%)
 Frame = +1

Query: 652 VKRPRCWXFSIGXAPLTSITKIDAQVXGGETRQDYKDTRRFPLKAPSCALLFRP 813
           V+ PR   FSIG APLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44  VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97


>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 37

 Score = 64.9 bits (151), Expect = 4e-09
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +3

Query: 792 VRSPVPTLPXTGYLSAFLPSGSVALSHXSRXRYL 893
           +RSPVPTLP TGYLSAFLPSGSVALSH SR RYL
Sbjct: 1   MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYL 34


>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 59.7 bits (138), Expect = 1e-07
 Identities = 31/40 (77%), Positives = 31/40 (77%)
 Frame = +3

Query: 498 SXSSXTDSLXXVVRLRXAVSAHXKXVIRLSTXSGDNXGKN 617
           S SS TDSL  VVRLR AVSAH K VIRLST SGDN GKN
Sbjct: 19  SASSLTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKN 58


>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. SS
          Length = 114

 Score = 49.2 bits (112), Expect = 2e-04
 Identities = 26/77 (33%), Positives = 39/77 (50%)
 Frame = +1

Query: 583 YPXNXGITQEKTCEQKASKRPEXVKRPRCWXFSIGXAPLTSITKIDAQVXGGETRQDYKD 762
           +P N  I  ++   + + + P          F     PLT+ITKI  Q    +T+ +YK 
Sbjct: 38  HPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKY 97

Query: 763 TRRFPLKAPSCALLFRP 813
           T  FPL++PS +LLF P
Sbjct: 98  TTPFPLQSPSYSLLFPP 114


>UniRef50_UPI00015C640B Cluster: hypothetical protein
           CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
           Citrobacter koseri ATCC BAA-895
          Length = 99

 Score = 48.4 bits (110), Expect = 4e-04
 Identities = 26/62 (41%), Positives = 33/62 (53%)
 Frame = -3

Query: 960 TGRXXXGVCXPSPXWXGRPTPX*DTYXVXYEKAPRFPKGERRTGIR*XAGSEQESARGSF 781
           + R   GV   SP W  RP P  DT  V YEKAPRFPKG++   +   +G  Q   R + 
Sbjct: 21  SSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV---SGKRQGRNRRAH 77

Query: 780 QG 775
           +G
Sbjct: 78  EG 79



 Score = 43.2 bits (97), Expect = 0.013
 Identities = 23/40 (57%), Positives = 24/40 (60%)
 Frame = -1

Query: 845 EKGGQVSGXRQGRNRRAHEGAFRGKRLVSL*SCRVSPPXT 726
           +K  QVSG RQGRNRRAHEGA   K   SL      PP T
Sbjct: 60  KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99


>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
           CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
           Citrobacter koseri ATCC BAA-895
          Length = 125

 Score = 39.5 bits (88), Expect = 0.17
 Identities = 29/80 (36%), Positives = 30/80 (37%)
 Frame = +1

Query: 727 VXGGETRQDYKDTRRFPLKAPSCALLFRPCRLPDTCPPFSLREAWRFLIXHAVGISXRGR 906
           V  GETRQD K         P       P       PPFSL  +         GIS R R
Sbjct: 23  VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82

Query: 907 SSAPXXAGXTNPXXXPTGGP 966
           S AP  A   NP   PT  P
Sbjct: 83  SFAPSWAVSKNPPFSPTAAP 102



 Score = 34.3 bits (75), Expect = 6.2
 Identities = 20/37 (54%), Positives = 23/37 (62%)
 Frame = +2

Query: 755 IKIPGVSP*KLPRALSCSDPAXYRIPVRLSPFGKRGA 865
           +KI  VS   LP ALSCS+PA  RIPV   PF   G+
Sbjct: 32  LKIITVSDESLPLALSCSNPAVSRIPV--PPFSLAGS 66


>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
           Myxococcus xanthus
          Length = 486

 Score = 35.5 bits (78), Expect = 2.7
 Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = +1

Query: 442 CXNXSANXRGXAVXXXGALPXPRXLTRCXRSXGCGXRXQL-TQRX*YGYPXNXGITQ 609
           C    A  R  AV    ALP  R  TRC RS GCG      +    YG P   G+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,950,392
Number of Sequences: 1657284
Number of extensions: 9988613
Number of successful extensions: 23283
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23089
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 118318866513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)