Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_K07
(1246 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 35 0.14
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 33 0.42
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 33 0.42
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 32 0.73
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 32 0.73
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.7
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 31 1.7
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 2.2
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 2.2
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 31 2.2
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 2.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 2.2
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 2.2
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 2.2
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 30 3.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 3.0
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 3.9
Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical pr... 30 3.9
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 3.9
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 30 3.9
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 3.9
Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical pr... 29 5.2
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 5.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.2
U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 29 5.2
U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helica... 29 5.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.2
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 29 5.2
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 29 6.8
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 29 6.8
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 29 6.8
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 29 6.8
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 9.0
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 9.0
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 9.0
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 9.0
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 34.7 bits (76), Expect = 0.14
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -1
Query: 544 PXFWGTXFPPXG-GXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG 410
P +G P G G PPP PGAPG +G G P PG
Sbjct: 394 PSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPG 439
Score = 32.7 bits (71), Expect = 0.56
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -1
Query: 532 GTXFPPXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG 410
G+ PP GG PP PG PG +G G P PG
Sbjct: 421 GSYGPPQGGPGGFGPPP-PGGPGAYGPPPTGFPPVGAPPPG 460
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 33.1 bits (72), Expect = 0.42
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -1
Query: 520 PPXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPGXG 404
PP GG PPP PG GG P P PG G
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 33.1 bits (72), Expect = 0.42
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -1
Query: 520 PPXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPGXG 404
PP GG PPP PG GG P P PG G
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 32.3 bits (70), Expect = 0.73
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG----XGRFX*AGKTXPP 371
P G P PG PG G E P NP +PG G+ AG+ PP
Sbjct: 202 PRGEPGTEYKPGQPGRPGPQGPRGETGPAGNPGAPGNDGEAGKNGNAGRPGPP 254
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 32.3 bits (70), Expect = 0.73
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG----XGRFX*AGKTXPP 371
P G P PG PG G E P NP +PG G+ AG+ PP
Sbjct: 196 PRGEPGTEYKPGQPGRPGPQGPRGETGPAGNPGAPGNDGEAGKNGNAGRPGPP 248
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG 410
P G P P PG PG GG P P +PG
Sbjct: 203 PAGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPG 238
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG 410
P G P P PG PG GG P P +PG
Sbjct: 203 PSGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPG 238
>Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical
protein F08G5.4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG 410
P G P P PGAPG G + P P +PG
Sbjct: 140 PAGEAGPAGPDGAPGAPGPDGQPGQDGPAGQPGAPG 175
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 511 GGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG 410
GG P PP PG PG GG G P G
Sbjct: 148 GGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRG 181
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 511 GGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG 410
GG P PP PG PG GG G P G
Sbjct: 148 GGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRG 181
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/52 (38%), Positives = 22/52 (42%)
Frame = -1
Query: 520 PPXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPGXGRFX*AGKTXPPXP 365
P G P PP PG PG G G P NP +PG G+ PP P
Sbjct: 196 PSGGAAGPPGPPGPPGGPGNDG--QPGGP-GNPGAPGAVTEV-PGQQGPPGP 243
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = -1
Query: 520 PPXGGXXPXPP--PXXPGAPGXWGGXXEG-XPXXNPXSPGXGRFX*AGKTXPPXP 365
PP G P P P PGAPG G +G P +P + AG PP P
Sbjct: 121 PPGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPCQPCPAGPPGPPGP 175
Score = 29.1 bits (62), Expect = 6.8
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 511 GGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG 410
GG P PP G PG G P NP G
Sbjct: 259 GGPGPKGPPGPAGQPGSDGNPGTAGPPGNPGGEG 292
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 31.1 bits (67), Expect = 1.7
Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Frame = -1
Query: 520 PPXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG-----XGRFX*AGKTXPPXP 365
P GG P PP PG G G +G P NP +PG G AG PP P
Sbjct: 202 PSGGGEGPAGPPGPPGPAGNPG--TDGAP-GNPGAPGQVTETPGTPGPAGAAGPPGP 255
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 30.7 bits (66), Expect = 2.2
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG-XGRFX*AGKTXPPXP 365
P G P PP GAPG G + P P PG G+ AG+ PP P
Sbjct: 175 PKGPIGPPGPPGQAGAPGEPGSPAKSEPAV-PGPPGPPGQ---AGQQGPPGP 222
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Frame = -1
Query: 520 PPXGGXXPXPPPXXPGAPGXWGGXXE----GXPXXNPXSPGXGRFX*AGKTXPPXP 365
PP G P P PGAPG WG G +P P + G+ PP P
Sbjct: 108 PPGAGGTPGKP-GRPGAPGAWGMPGNPGKGGSGPCHPVVPTPCKPCPGGRPGPPGP 162
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG-XGRFX*AGKTXPPXP 365
P G P PP PG PG G P SPG G AG+ P P
Sbjct: 151 PQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGP 202
Score = 29.1 bits (62), Expect = 6.8
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -1
Query: 511 GGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPGXGRFX*AGKTXPPXP 365
G P PP PGAPG G P P G G++ PP P
Sbjct: 224 GDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVD--GQSGPPGP 270
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 30.7 bits (66), Expect = 2.2
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG 410
P P PP PGAPG G + NP PG
Sbjct: 85 PQASNCPAGPPGPPGAPGDRGLDGQPGGAGNPGQPG 120
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/55 (38%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = -1
Query: 520 PPXGGXXPXPPPXXPG-APGXWG--GXXEGXPXXNPXSPGXGRFX*AGKTXPPXP 365
PP G P PPP PG PG G G P PG G G PP P
Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG-----GMPPPPPP 339
Score = 30.3 bits (65), Expect = 3.0
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -1
Query: 520 PPXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPGXGRFX*AGKTXPPXP 365
PP G P PPP P + G W P P PG G PP P
Sbjct: 278 PPTPGMTPRPPP--PPSSGMWPPPPPPPPGRTPGPPGM-----PGMPPPPPP 322
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG-XGRFX*AGKTXPPXP 365
P G P PP PG PG G P SPG G AG+ P P
Sbjct: 146 PQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGP 197
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = -1
Query: 511 GGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG-XGRFX*AGKTXPPXP 365
G P PP PGAPG G P P G G +G PP P
Sbjct: 219 GDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGP 268
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 30.7 bits (66), Expect = 2.2
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG 410
P G PP PG PG G +G NP PG
Sbjct: 164 PSGDNGRKGPPGPPGGPGGPGEGGDGGRPGNPGRPG 199
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG----XGRFX*AGKTXPP 371
P G P PG PG G E P P SPG G+ AG+ PP
Sbjct: 203 PRGEPGTEYKPGQPGRPGPPGPRGEAGPAGQPGSPGNDGESGKPGNAGRPGPP 255
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -1
Query: 511 GGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPGXGRFX*AGKTXPPXP 365
G P PP PGAPG G P +P G G+ PP P
Sbjct: 226 GDAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVD--GQAGPPGP 272
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/55 (38%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = -1
Query: 520 PPXGGXXPXPPPXXPG-APGXWG--GXXEGXPXXNPXSPGXGRFX*AGKTXPPXP 365
PP G P PPP PG PG G G P PG G G PP P
Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG-----GMPPPPPP 349
Score = 30.3 bits (65), Expect = 3.0
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -1
Query: 520 PPXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPGXGRFX*AGKTXPPXP 365
PP G P PPP P + G W P P PG G PP P
Sbjct: 288 PPTPGMTPRPPP--PPSSGMWPPPPPPPPGRTPGPPGM-----PGMPPPPPP 332
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG-XGRFX*AGKTXPPXP 365
P G P PP PG PG G P SPG G AG+ P P
Sbjct: 146 PQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGP 197
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = -1
Query: 511 GGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG-XGRFX*AGKTXPPXP 365
G P PP PGAPG G P P G G +G PP P
Sbjct: 219 GDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGP 268
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -1
Query: 511 GGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPGXGRFX*AGKTXPPXP 365
G P PP PGAPG G P +P G G+ PP P
Sbjct: 226 GDAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVD--GQAGPPGP 272
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG 410
P GG P PP PG G G G P P PG
Sbjct: 151 PAGGPGPKGPPGPPGGHGEPGPAGRGGP-RGPPGPG 185
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 3.0
Identities = 22/66 (33%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = -1
Query: 553 GFXPXFWGTXFPPXG--GXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPGXGRFX*AGKT 380
G P F PP G G P PPP G P G G P P + AG
Sbjct: 697 GVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAP 756
Query: 379 XPPXPR 362
PP R
Sbjct: 757 PPPFGR 762
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
Frame = -1
Query: 520 PPXGGXXPXPPP---XXPGAPGXWGG 452
PP GG PPP PGAPG GG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGG 807
>Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical
protein C09G5.3 protein.
Length = 283
Score = 29.9 bits (64), Expect = 3.9
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -1
Query: 511 GGXXPXPPPXXPGAPGXWG--GXXEGXPXXNPXSPG 410
GG P PP PG PG G E P P +PG
Sbjct: 181 GGKGPQGPPGTPGRPGQPGRKAIGEAGPKGPPGAPG 216
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
Frame = -1
Query: 520 PPXGGXXPXPPP---XXPGAPGXWGG 452
PP GG PPP PGAPG GG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGG 807
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.9 bits (64), Expect = 3.9
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = -1
Query: 532 GTXFP--PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPGXGRFX*AGKTXPP 371
GT P P G P PP PGAPG +G P G G+ PP
Sbjct: 253 GTPGPAGPPGPPGPIGPPGQPGAPGSSQPGPQGPPGDPGIDGAPGNPGSPGEPGPP 308
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXE-GXPXXN--PXSPGXGRFX*AGKTXPPXP 365
P G PPP PG PG G + G P + P +PG G P P
Sbjct: 203 PDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGP 256
Score = 29.9 bits (64), Expect = 3.9
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -1
Query: 511 GGXXPXPPPXXPGAPG--XWGGXXEGXPXXNPXSPG 410
GG P PP PG PG GG + P P PG
Sbjct: 249 GGPGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPG 284
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -1
Query: 520 PPXGGXXPXPPPXXPGAPGXWGGXXE-GXPXXNPXSPGXGRFX*AGKTXPPXP 365
PP G P PP G PG G + G P N + G AG PP P
Sbjct: 211 PPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGP-AGPPGPPGP 262
>Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical
protein F57B7.3 protein.
Length = 295
Score = 29.5 bits (63), Expect = 5.2
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG 410
P G P P PGAPG G + P +PG
Sbjct: 136 PAGAPGPQGPDGAPGAPGPSGQPGQDGASGQPGAPG 171
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG 410
P G P PGAPG G P NP +PG
Sbjct: 228 PPGPPGQAGPDGQPGAPGGPGTPGSKGPPGNPGAPG 263
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1
Query: 520 PPXGGXXPXPPPXXPGAPGXWGGXXEGXP 434
PP GG P PPP PG G GG P
Sbjct: 763 PPPGGCPPPPPPPPPG--GFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1
Query: 520 PPXGGXXPXPPPXXPGAPGXWGGXXEGXP 434
PP GG P PPP PG G GG P
Sbjct: 763 PPPGGCPPPPPPPPPG--GFKGGPPPPPP 789
>U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein
173 protein.
Length = 325
Score = 29.5 bits (63), Expect = 5.2
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -1
Query: 490 PPXXPGAPGXWGGXXEGXPXXNPXSPGXGRFX*AGKTXPPXPR 362
P PG PG G G P G GR G T PP PR
Sbjct: 185 PTGPPGPPGLKG--MPGIPGNQGEDAGPGRQGMPGPTGPPGPR 225
>U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform b
protein.
Length = 265
Score = 29.5 bits (63), Expect = 5.2
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPGXGRFX*AGKTXPPXP 365
P G P PP G PG G +G P S G AG P P
Sbjct: 193 PMGAIGPIGPPGPKGNPGPDGQSYQGPPGPPGDSGTPGHEGRAGPNGPAGP 243
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1
Query: 520 PPXGGXXPXPPPXXPGAPGXWGGXXEGXP 434
PP GG P PPP PG G GG P
Sbjct: 346 PPPGGCPPPPPPPPPG--GFKGGPPPPPP 372
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXE-GXPXXNPXSPG-XGRFX*AGKTXPPXP 365
P G P PP PG PG G + G PG GR G PP P
Sbjct: 217 PKGNAGPAGPPGPPGYPGRPGETGDHGKTIAGEAPPGPPGRQGEMGPQGPPGP 269
Score = 29.1 bits (62), Expect = 6.8
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -1
Query: 499 PXPPPXXPGAPGXWGGXXEGXPXXNPXSPG-XGRFX*AGKTXPPXP 365
P PP GAPG G P +PG G AG PP P
Sbjct: 184 PPGPPGPTGAPGDKGSRGYPGESGEPGTPGSAGPKGNAGPAGPPGP 229
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 29.1 bits (62), Expect = 6.8
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG 410
P G P P PG PG G + P P PG
Sbjct: 227 PQGPPGPAGSPGAPGGPGQPGAPGQKGPSGAPGQPG 262
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 29.1 bits (62), Expect = 6.8
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -1
Query: 523 FPPXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPGXG 404
FPP G P PGAPG G G P +PG G
Sbjct: 285 FPPGQGGPGMPGSFPPGAPGPGGPGMPG--SFAPGAPGPG 322
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 29.1 bits (62), Expect = 6.8
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPGXGRFX*AGKTXPPXP 365
P G P PP G PG G E + G AG PP P
Sbjct: 172 PAGEAGPPGPPGPDGKPGAAGSDGEAGAPGTKTTNAPGEPGPAGPPGPPGP 222
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 29.1 bits (62), Expect = 6.8
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = -1
Query: 520 PPXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPGXGRFX*AGKTXPPXP 365
P G P PP PG PG G + P +P G PP P
Sbjct: 184 PTPGSPGPPGPPGPPGYPGRQGCQGKDGPSGDPGLRFIKTPGPVGAAGPPGP 235
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 29.1 bits (62), Expect = 6.8
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -1
Query: 517 PXGGXXPXP--PPXXPGAPGXWGGXXEGXPXXNPXSPGXGRFX*AGKTXPPXP 365
P G P P PP PGAPG G G P + + G G+ PP P
Sbjct: 204 PGGDAPPGPSGPPGRPGAPGQPG--KAGSPGQDGSNGDAGVAGEPGQRGPPGP 254
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -1
Query: 520 PPXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG 410
PP P PP PG PG G + NP SPG
Sbjct: 142 PPPCQPCPQGPPGPPGPPGPSG---DAGSNGNPGSPG 175
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAP---GXWGGXXEGXPXXNPXSPG 410
P G P PP PG P G G P NP PG
Sbjct: 220 PQGAPGPQGPPGQPGQPGHDGQPGAPGPKGPNGNPGQPG 258
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 28.7 bits (61), Expect = 9.0
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -1
Query: 520 PPXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG-XGRFX*AGKTXPPXP 365
PP P PP PG PG G + NP SPG G+ G P P
Sbjct: 109 PPPCQPCPQGPPGPPGPPGPSG---DAGGNGNPGSPGQDGQPGAPGNKGPSGP 158
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.7 bits (61), Expect = 9.0
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -1
Query: 520 PPXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG-XGRFX*AGKTXPPXP 365
PP P PP PG PG G + NP SPG G+ G P P
Sbjct: 142 PPPCQPCPQGPPGPPGPPGPSG---DAGGNGNPGSPGQDGQPGAPGNKGPSGP 191
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -1
Query: 517 PXGGXXPXPPPXXPGAPGXWGGXXEGXPXXNPXSPG 410
P P PP PGA G G + P P PG
Sbjct: 84 PQASNCPAGPPGPPGASGDRGLDGQPGPAGKPGQPG 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,004,470
Number of Sequences: 27780
Number of extensions: 196630
Number of successful extensions: 1668
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3453805598
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -