Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_K06
(1188 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 49 1e-06
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 37 0.005
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 36 0.015
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 30 0.72
SPCC622.06c |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 29 0.96
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 28 2.9
SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces pomb... 27 3.9
SPAC1687.04 |||conserved eukaryotic protein|Schizosaccharomyces ... 26 8.9
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 49.2 bits (112), Expect = 1e-06
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 271 TXKXIKQYEVTFNKFDEGRDGFLDLTEVKRMMERLGAPQTHLGLKAMISEVDEDGDNKIS 450
T + I ++ F+ FD +DG + E+ +M LG T L+ MI+EVD DG+ I
Sbjct: 7 TDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTID 66
Query: 451 FREFL-LIYRKAR 486
F EFL ++ RK +
Sbjct: 67 FTEFLTMMARKMK 79
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +1
Query: 304 FNKFDEGRDGFLDLTEVKRMMERLGAPQTHLGLKAMISEVDEDGDNKISFREF 462
F FD+ +G++ + E+ ++ LG + + MI E D DGD I++ EF
Sbjct: 91 FKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEF 143
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 37.1 bits (82), Expect = 0.005
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +1
Query: 283 IKQYEVTFNKFDEGRDGFLDLTEVKRMMERLGAPQTHLGLKAMISEVDEDGDNKISFREF 462
+++ + F FD+ G + L ++R+ + L L+AMI E D D D +I+ +EF
Sbjct: 109 LEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEF 168
Query: 463 LLI 471
+ I
Sbjct: 169 IAI 171
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 35.5 bits (78), Expect = 0.015
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 235 KFVNVYTXFHXFTXKXIKQYEVTFNKFDEGRDGFL---DLTEVKRMM--ERLGAPQTHLG 399
+F+N + F K K + F +D RDG++ +L V +MM L Q
Sbjct: 77 EFINSLSVFSVHGNKEEK-LKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQI 135
Query: 400 LKAMISEVDEDGDNKISFREF 462
+ I EVD+D D KISF EF
Sbjct: 136 VDKTIMEVDKDRDGKISFEEF 156
Score = 30.3 bits (65), Expect = 0.55
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +1
Query: 268 FTXKXIKQYEVTFNKFDEGRDGFLDLTEVKRMMERLGAPQTHLGLKAMISEVDEDGDNKI 447
F+ + I++ F K D + G +D E + P + S VDEDG +
Sbjct: 18 FSNEEIERIRKRFIKIDANQSGSIDRNEFLSIPSVASNPLA----SRLFSVVDEDGGGDV 73
Query: 448 SFREFL 465
F+EF+
Sbjct: 74 DFQEFI 79
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 29.9 bits (64), Expect = 0.72
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 304 FNKFDEGRDGFLDLTEVKRMMERLGAPQTHLGLKAMISEVDEDGDNKISFREF 462
+ K ++ + LDL +V RM + L + L+ + D D K+SF EF
Sbjct: 303 WEKLEKEQSAQLDLGDVHRMCQMLHLNASMEFLEETFQKADADHSGKLSFEEF 355
>SPCC622.06c |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 122
Score = 29.5 bits (63), Expect = 0.96
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +1
Query: 733 NRKRYCYLSSL*DVMLPMLGMSCSNSVLFFKQNKINFSV 849
N+ YC L ++ D ++ + + C +L+F K+N +
Sbjct: 67 NKNTYCELPAVADAIINSIALVCIIVILYFSSRKLNVEI 105
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 27.9 bits (59), Expect = 2.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 3 PXRAPTGPSFXSXAPVSLRRQPQPLASLXAQPL 101
P R + P+F APVS + P P L +PL
Sbjct: 30 PARTVSTPAFMEPAPVSKKPLPPPTRRLPRKPL 62
>SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 860 RSKLTEKLILFCLKNNTLLLQLIPSIGNITSYRLDK 753
RSK+ FCL N + L LI +IGN L K
Sbjct: 339 RSKVGPGSCFFCLSNPNVALHLIVAIGNEAYMALPK 374
>SPAC1687.04 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 501
Score = 26.2 bits (55), Expect = 8.9
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 686 GGSNLKKK-LRYSNTNRIENDIVICLVC 766
G +LK++ L+YSN + ND +C+ C
Sbjct: 149 GSESLKERSLKYSNRLQASNDTGVCVKC 176
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,695,541
Number of Sequences: 5004
Number of extensions: 66982
Number of successful extensions: 184
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 639490422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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