Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_K04
         (1180 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    30   0.034
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    28   0.14 
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    25   1.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   1.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   2.3  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    23   6.9  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    23   6.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   9.1  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 30.3 bits (65), Expect = 0.034
 Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
 Frame = +2

Query: 458 VDECATNNGGCEQRCVNDPGS------FHCECSPPLSLASDGKKCVPRIPLAI 598
           +++C   NG C   C+  P          C C   L L SDG  CV ++   I
Sbjct: 33  MNQCQAVNGHCSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMCVEKVSTTI 85


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 28.3 bits (60), Expect = 0.14
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
 Frame = +2

Query: 458 VDECATNNGGCEQRCVNDPGS------FHCECSPPLSLASDGKKCVPR 583
           +++C   NG C   C+  P          C C   L L SDG  CV +
Sbjct: 33  MNQCQAVNGHCSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMCVEK 80


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 524 GSFQDH*RSVAHTHRCSSHTRLHQHNTAAPAWSSFP 417
           G    H  +  H H   + T  HQH+T   A SS+P
Sbjct: 420 GHGHSHIHATPHHHHSHAATPHHQHSTPL-AHSSYP 454


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 19/69 (27%), Positives = 29/69 (42%)
 Frame = +2

Query: 488 CEQRCVNDPGSFHCECSPPLSLASDGKKCVPRIPLAIAEPLPLVRASSRCYAPCDTVTWL 667
           CE  C++D  +        LSL S+       +    AEP P+ +A S+C+    T   +
Sbjct: 666 CETFCLDDDDTL---LEVALSLGSEALSAAT-VRFIEAEPQPIGKALSKCHNRNVTTCNM 721

Query: 668 TRKVRQLND 694
            RK     D
Sbjct: 722 FRKTNLSGD 730


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 375 SPCTSHACSHRFRLHGSIDFGIHRPATCWCVSQQ 274
           +P T H   H  R   S+D   HR    W V ++
Sbjct: 77  NPETHHPIRHGRRQSRSMDLNAHREQMSWPVKKE 110


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 247 VPHATRLPRSQHQVRRASRCAAIYNVD 167
           VP+ +RL +S+  +     C  I N+D
Sbjct: 97  VPNTSRLDKSEISLATKQACGFIDNID 123


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -2

Query: 279 QQCSLTHCTSASPTRHVCRDRNTRSVGHRAVL 184
           Q C    C+ AS  RHV      R   +R V+
Sbjct: 9   QLCGKVLCSKASLKRHVADKHAERQEEYRCVI 40


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 404  TQGSRNTTYSLP 369
            TQ SRN TYS P
Sbjct: 1297 TQPSRNNTYSTP 1308


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 306,388
Number of Sequences: 438
Number of extensions: 6555
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40126833
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)