Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_J23
         (1122 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48006-3|CAB62803.1|  449|Caenorhabditis elegans Hypothetical pr...    30   3.4  
Z81530-5|CAB04309.2|  287|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81510-3|CAB04163.1|  311|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z82287-2|CAB05312.1|  502|Caenorhabditis elegans Hypothetical pr...    29   7.9  

>Z48006-3|CAB62803.1|  449|Caenorhabditis elegans Hypothetical
           protein F19C6.2b protein.
          Length = 449

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -3

Query: 175 IFKIHVARLAFLKIIAFHSELDLVNNWEICVKN-SENKHHKSHNIESDLKNS 23
           IFK+H        ++A   + D++ NW   VK+ +ENK H S +    + N+
Sbjct: 81  IFKVHTTDYEKNPLVAEAKKSDVLPNWAHSVKDFAENKLHSSESRNFGMHNT 132


>Z81530-5|CAB04309.2|  287|Caenorhabditis elegans Hypothetical
           protein F36D1.6 protein.
          Length = 287

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -3

Query: 448 HTAFEFASIITRVIGERIRVLTLGSVPNGHYVRTQSVFIRRS 323
           H  +EF S ++RVIG +  ++ LG+    +   T +VF RRS
Sbjct: 236 HGEYEFGSPLSRVIGRKWTIVGLGTT---YMDFTSNVFFRRS 274


>Z81510-3|CAB04163.1|  311|Caenorhabditis elegans Hypothetical
           protein F21D9.4 protein.
          Length = 311

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +2

Query: 155 RHMNLENLDKALHDLGMLSAITEARREYLRET-KSNYSVMRLNTRYVSNVTVGYCMKRAT 331
           R +N E L+   +DL   +    ARR+ +R   + + S  R+      N+ VGYC  R  
Sbjct: 161 REVNAEQLEA--YDL---TICPRARRKIIRPWFEQDQSYTRVAFERNQNI-VGYCTIRVI 214

Query: 332 NKNRLC 349
           N NRLC
Sbjct: 215 NLNRLC 220


>Z82287-2|CAB05312.1|  502|Caenorhabditis elegans Hypothetical
           protein ZK550.2 protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = -3

Query: 658 VGYH*ILTSWWLMSFINL*FLYSCRDTIHFGGCFRVYRWFDC*IEVLEGLASFRWTFY 485
           V +H +   WW  S   L FL    +T   GGC   Y W +    V   L  F + F+
Sbjct: 342 VAFHVVNYPWWFYSG-PLHFLPPGSNTTIVGGCLDSYSWCNTTTRVPMALYIFAFVFF 398


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,038,551
Number of Sequences: 27780
Number of extensions: 496755
Number of successful extensions: 1235
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3025992820
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)