BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_J22
(1138 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ412564-1|ABD65410.1| 342|Homo sapiens ankyrin repeat and zinc... 94 7e-19
AK001277-1|BAA91596.1| 342|Homo sapiens protein ( Homo sapiens ... 94 7e-19
BC008948-1|AAH08948.1| 726|Homo sapiens ankyrin repeat and zinc... 92 4e-18
BC000238-1|AAH00238.1| 726|Homo sapiens ankyrin repeat and zinc... 92 4e-18
AK023206-1|BAB14462.1| 726|Homo sapiens protein ( Homo sapiens ... 92 4e-18
BC010545-1|AAH10545.1| 477|Homo sapiens zinc finger protein 622... 38 0.068
BC008752-1|AAH08752.1| 477|Homo sapiens zinc finger protein 622... 38 0.068
AY046059-1|AAL02121.1| 477|Homo sapiens zinc finger-like protei... 38 0.068
AK124773-1|BAC85942.1| 841|Homo sapiens protein ( Homo sapiens ... 33 1.9
>DQ412564-1|ABD65410.1| 342|Homo sapiens ankyrin repeat and zinc
finger domain containing 1 protein.
Length = 342
Score = 94.3 bits (224), Expect = 7e-19
Identities = 75/254 (29%), Positives = 104/254 (40%), Gaps = 16/254 (6%)
Frame = +2
Query: 269 CSCCGVGPFETRAQQTAHYKHHWHTFNLKRKLFGKSPLSIGQYNXXXXXXXXXXXXXXXX 448
CS C F+ +Q HYK WH FNLK++L K LS +
Sbjct: 74 CSTCDQ-TFQNHQEQREHYKLDWHRFNLKQRLKDKPLLSALDFEKQSSTGDLSSISGSED 132
Query: 449 XXXXPLSDL---------FAAATRHC-----KAFFTNHYGQVFCIYRCILHHKKEELSTD 586
DL F +R + F N GQ YRC+L + D
Sbjct: 133 SDSASEEDLQTLDRERATFEKLSRPPGFYPHRVLFQNAQGQFLYAYRCVLGPHQ-----D 187
Query: 587 GDGSAWVERVEQLLIPGYQRWAVLMVSGGRFAGAVFSGGTIVLHKTFHSYVTRRGQGQAQ 766
A + ++ L G + VLM + G FAGA+F G +V HKTFH Y R +G AQ
Sbjct: 188 PPEEAEL-LLQNLQSRGPRDCVVLMAAAGHFAGAIFQGREVVTHKTFHRYTVRAKRGTAQ 246
Query: 767 ATRDXXXXXXXXXXXXLRRYNQAQFLEHIQDIVS--QWTEXFKGXXLILYRAVGSLNQAA 940
RD LRRYN+A + ++D+++ W + + IL RA S
Sbjct: 247 GLRDARGGPSHSAGANLRRYNEATLYKDVRDLLAGPSWAKALEEAGTILLRAPRSGRSLF 306
Query: 941 IFGKNSPIXKMIQD 982
GK +P+ + I D
Sbjct: 307 FGGKGAPLQRGIPD 320
>AK001277-1|BAA91596.1| 342|Homo sapiens protein ( Homo sapiens
cDNA FLJ10415 fis, clone NT2RP1000101. ).
Length = 342
Score = 94.3 bits (224), Expect = 7e-19
Identities = 75/254 (29%), Positives = 104/254 (40%), Gaps = 16/254 (6%)
Frame = +2
Query: 269 CSCCGVGPFETRAQQTAHYKHHWHTFNLKRKLFGKSPLSIGQYNXXXXXXXXXXXXXXXX 448
CS C F+ +Q HYK WH FNLK++L K LS +
Sbjct: 74 CSTCDQ-TFQNHQEQREHYKLDWHRFNLKQRLKDKPLLSALDFEKQSSTGDLSSISGSED 132
Query: 449 XXXXPLSDL---------FAAATRHC-----KAFFTNHYGQVFCIYRCILHHKKEELSTD 586
DL F +R + F N GQ YRC+L + D
Sbjct: 133 SDSASEEDLQTLDRERATFEKLSRPPGFYPHRVLFQNAQGQFLYAYRCVLGPHQ-----D 187
Query: 587 GDGSAWVERVEQLLIPGYQRWAVLMVSGGRFAGAVFSGGTIVLHKTFHSYVTRRGQGQAQ 766
A + ++ L G + VLM + G FAGA+F G +V HKTFH Y R +G AQ
Sbjct: 188 PPEEAEL-LLQNLQSRGPRDCVVLMAAAGHFAGAIFQGREVVTHKTFHRYTVRAKRGTAQ 246
Query: 767 ATRDXXXXXXXXXXXXLRRYNQAQFLEHIQDIVS--QWTEXFKGXXLILYRAVGSLNQAA 940
RD LRRYN+A + ++D+++ W + + IL RA S
Sbjct: 247 GLRDARGGPSHSAGANLRRYNEATLYKDVRDLLAGPSWAKALEEAGTILLRAPRSGRSLF 306
Query: 941 IFGKNSPIXKMIQD 982
GK +P+ + I D
Sbjct: 307 FGGKGAPLQRGIPD 320
>BC008948-1|AAH08948.1| 726|Homo sapiens ankyrin repeat and zinc
finger domain containing 1 protein.
Length = 726
Score = 91.9 bits (218), Expect = 4e-18
Identities = 73/250 (29%), Positives = 102/250 (40%), Gaps = 16/250 (6%)
Frame = +2
Query: 269 CSCCGVGPFETRAQQTAHYKHHWHTFNLKRKLFGKSPLSIGQYNXXXXXXXXXXXXXXXX 448
CS C F+ +Q HYK WH FNLK++L K LS +
Sbjct: 74 CSTCDQ-TFQNHQEQREHYKLDWHRFNLKQRLKDKPLLSALDFEKQSSTGDLSSISGSED 132
Query: 449 XXXXPLSDL---------FAAATRHC-----KAFFTNHYGQVFCIYRCILHHKKEELSTD 586
DL F +R + F N GQ YRC+L + D
Sbjct: 133 SDSASEEDLQTLDRERATFEKLSRPPGFYPHRVLFQNAQGQFLYAYRCVLGPHQ-----D 187
Query: 587 GDGSAWVERVEQLLIPGYQRWAVLMVSGGRFAGAVFSGGTIVLHKTFHSYVTRRGQGQAQ 766
A + ++ L G + VLM + G FAGA+F G +V HKTFH Y R +G AQ
Sbjct: 188 PPEEAEL-LLQNLQSRGPRDCVVLMAAAGHFAGAIFQGREVVTHKTFHRYTVRAKRGTAQ 246
Query: 767 ATRDXXXXXXXXXXXXLRRYNQAQFLEHIQDIVS--QWTEXFKGXXLILYRAVGSLNQAA 940
RD LRRYN+A + ++D+++ W + + IL RA S
Sbjct: 247 GLRDARGGPSHSAGANLRRYNEATLYKDVRDLLAGPSWAKALEEAGTILLRAPRSGRSLF 306
Query: 941 IFGKNSPIXK 970
GK +P+ +
Sbjct: 307 FGGKGAPLQR 316
>BC000238-1|AAH00238.1| 726|Homo sapiens ankyrin repeat and zinc
finger domain containing 1 protein.
Length = 726
Score = 91.9 bits (218), Expect = 4e-18
Identities = 73/250 (29%), Positives = 102/250 (40%), Gaps = 16/250 (6%)
Frame = +2
Query: 269 CSCCGVGPFETRAQQTAHYKHHWHTFNLKRKLFGKSPLSIGQYNXXXXXXXXXXXXXXXX 448
CS C F+ +Q HYK WH FNLK++L K LS +
Sbjct: 74 CSTCDQ-TFQNHQEQREHYKLDWHRFNLKQRLKDKPLLSALDFEKQSSTGDLSSISGSED 132
Query: 449 XXXXPLSDL---------FAAATRHC-----KAFFTNHYGQVFCIYRCILHHKKEELSTD 586
DL F +R + F N GQ YRC+L + D
Sbjct: 133 SDSASEEDLQTLDRERATFEKLSRPPGFYPHRVLFQNAQGQFLYAYRCVLGPHQ-----D 187
Query: 587 GDGSAWVERVEQLLIPGYQRWAVLMVSGGRFAGAVFSGGTIVLHKTFHSYVTRRGQGQAQ 766
A + ++ L G + VLM + G FAGA+F G +V HKTFH Y R +G AQ
Sbjct: 188 PPEEAEL-LLQNLQSRGPRDCVVLMAAAGHFAGAIFQGREVVTHKTFHRYTVRAKRGTAQ 246
Query: 767 ATRDXXXXXXXXXXXXLRRYNQAQFLEHIQDIVS--QWTEXFKGXXLILYRAVGSLNQAA 940
RD LRRYN+A + ++D+++ W + + IL RA S
Sbjct: 247 GLRDARGGPSHSAGANLRRYNEATLYKDVRDLLAGPSWAKALEEAGTILLRAPRSGRSLF 306
Query: 941 IFGKNSPIXK 970
GK +P+ +
Sbjct: 307 FGGKGAPLQR 316
>AK023206-1|BAB14462.1| 726|Homo sapiens protein ( Homo sapiens
cDNA FLJ13144 fis, clone NT2RP3003278. ).
Length = 726
Score = 91.9 bits (218), Expect = 4e-18
Identities = 73/250 (29%), Positives = 102/250 (40%), Gaps = 16/250 (6%)
Frame = +2
Query: 269 CSCCGVGPFETRAQQTAHYKHHWHTFNLKRKLFGKSPLSIGQYNXXXXXXXXXXXXXXXX 448
CS C F+ +Q HYK WH FNLK++L K LS +
Sbjct: 74 CSTCDQ-TFQNHQEQREHYKLDWHRFNLKQRLKDKPLLSALDFEKQSSTGDLSSISGSED 132
Query: 449 XXXXPLSDL---------FAAATRHC-----KAFFTNHYGQVFCIYRCILHHKKEELSTD 586
DL F +R + F N GQ YRC+L + D
Sbjct: 133 SDSASEEDLQTLDRERATFEKLSRPPGFYPHRVLFQNAQGQFLYAYRCVLGPHQ-----D 187
Query: 587 GDGSAWVERVEQLLIPGYQRWAVLMVSGGRFAGAVFSGGTIVLHKTFHSYVTRRGQGQAQ 766
A + ++ L G + VLM + G FAGA+F G +V HKTFH Y R +G AQ
Sbjct: 188 PPEEAEL-LLQNLQSRGPRDCVVLMAAAGHFAGAIFQGREVVTHKTFHRYTVRAKRGTAQ 246
Query: 767 ATRDXXXXXXXXXXXXLRRYNQAQFLEHIQDIVS--QWTEXFKGXXLILYRAVGSLNQAA 940
RD LRRYN+A + ++D+++ W + + IL RA S
Sbjct: 247 GLRDARGGPSHSAGANLRRYNEATLYKDVRDLLAGPSWAKALEEAGTILLRAPRSGRSLF 306
Query: 941 IFGKNSPIXK 970
GK +P+ +
Sbjct: 307 FGGKGAPLQR 316
>BC010545-1|AAH10545.1| 477|Homo sapiens zinc finger protein 622
protein.
Length = 477
Score = 37.9 bits (84), Expect = 0.068
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 269 CSCCGVGPFETRAQQTAHYKHHWHTFNLKRKLFGKSPLS 385
C C V F Q AHYK WH +NL+RK+ +P++
Sbjct: 6 CITCRVA-FRDADMQRAHYKTDWHRYNLRRKVASMAPVT 43
>BC008752-1|AAH08752.1| 477|Homo sapiens zinc finger protein 622
protein.
Length = 477
Score = 37.9 bits (84), Expect = 0.068
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 269 CSCCGVGPFETRAQQTAHYKHHWHTFNLKRKLFGKSPLS 385
C C V F Q AHYK WH +NL+RK+ +P++
Sbjct: 6 CITCRVA-FRDADMQRAHYKTDWHRYNLRRKVASMAPVT 43
>AY046059-1|AAL02121.1| 477|Homo sapiens zinc finger-like protein 9
protein.
Length = 477
Score = 37.9 bits (84), Expect = 0.068
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 269 CSCCGVGPFETRAQQTAHYKHHWHTFNLKRKLFGKSPLS 385
C C V F Q AHYK WH +NL+RK+ +P++
Sbjct: 6 CITCRVA-FRDADMQRAHYKTDWHRYNLRRKVASMAPVT 43
>AK124773-1|BAC85942.1| 841|Homo sapiens protein ( Homo sapiens
cDNA FLJ42783 fis, clone BRAWH3005981. ).
Length = 841
Score = 33.1 bits (72), Expect = 1.9
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 689 LPQQICHPRPSGLPIFDSLGSIAAPHVLPRHCHHHPLIILPS 564
LP++ R +G P + PH LP H H P LPS
Sbjct: 268 LPEEAGEGRANGPPPLTATSPPQQPHALPPHAHRRPASALPS 309
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,072,334
Number of Sequences: 237096
Number of extensions: 2965316
Number of successful extensions: 6023
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6023
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15866314562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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