Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_J22
         (1138 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L15314-4|AAF99988.2|  618|Caenorhabditis elegans Hypothetical pr...    58   9e-09
U41534-6|AAB47598.1|  375|Caenorhabditis elegans Hypothetical pr...    39   0.008
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr...    29   4.6  
U70854-10|AAB09155.1|  296|Caenorhabditis elegans Hypothetical p...    29   8.1  

>L15314-4|AAF99988.2|  618|Caenorhabditis elegans Hypothetical
           protein K06H7.3 protein.
          Length = 618

 Score = 58.4 bits (135), Expect = 9e-09
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
 Frame = +2

Query: 650 AVLMVSGGRFAGAVFSGGTIVLHKTFHSYVTRRGQGQAQATRD-XXXXXXXXXXXXLRRY 826
           A+ + +GG FA A+F    + + K+FH YV R  QG  Q+  D             LRRY
Sbjct: 175 AIFLWNGGHFAAAMFENDKMTVQKSFHRYVARAKQGGVQSQHDSGGKGAAKSAGAQLRRY 234

Query: 827 NQAQFLEHIQDIVSQWTEXFKGXXLILYR 913
           N+ +  E IQ I+S W    +   L+  R
Sbjct: 235 NEQKMKEEIQSIMSSWKSRLQKTPLLFIR 263


>U41534-6|AAB47598.1|  375|Caenorhabditis elegans Hypothetical
           protein C16A3.4 protein.
          Length = 375

 Score = 38.7 bits (86), Expect = 0.008
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +2

Query: 242 LNGASDGNCCSCCGVGPFETRAQQTAHYKHHWHTFNLKRKLFGKSPLSIGQYN 400
           ++G++   C +C  V  FET   Q  HYK  WH +NLKR+      + I  +N
Sbjct: 1   MDGSTGFTCVTCRVV--FETAELQRDHYKTEWHRYNLKRQAAELPAIGIELFN 51


>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
           protein F59A3.1 protein.
          Length = 1014

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +1

Query: 604 GRTCGAAIDPRLSKMGSPDGLGWQICWGSFQWWHYSST 717
           GR CG + D      G  +G GW    G  Q W Y  T
Sbjct: 299 GRRCGLSADGDNFINGITNGAGWYHLAGGMQDWQYEHT 336


>U70854-10|AAB09155.1|  296|Caenorhabditis elegans Hypothetical
           protein F38A5.11 protein.
          Length = 296

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 693 SVVAL*FYTRHFIHMSQGEGKVKPRLQEMLIMVMR 797
           S++ +  +T HFI +   E +VK + QEM+  +M+
Sbjct: 237 SILLIIVFTHHFIMLEVNEHRVKKKEQEMIDCLMK 271


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,820,104
Number of Sequences: 27780
Number of extensions: 454618
Number of successful extensions: 1134
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3078165110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)