Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_J15
(1178 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.008
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 33 0.058
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 33 0.10
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 32 0.18
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 32 0.18
SPBC30B4.03c |||conserved protein |Schizosaccharomyces pombe|chr... 32 0.18
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 32 0.18
SPCPJ732.01 |vps5||retromer complex subunit Vps5|Schizosaccharom... 31 0.31
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 31 0.41
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 30 0.72
SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual 29 0.95
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 29 0.95
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.7
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 29 1.7
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo... 29 1.7
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 28 2.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.9
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 27 3.8
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom... 27 3.8
SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos... 27 3.8
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 27 5.1
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 27 5.1
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 27 6.7
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 27 6.7
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 6.7
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 26 8.8
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 26 8.8
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 26 8.8
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.008
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +3
Query: 147 PAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAASSGSNHSDSDEEGQYAPPPRSPKEAP 326
P PS + G P G+ + + P PP + AA S +G+ APPP P+ AP
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGS----IPLPPQGRSAPPPPPPRSAP 370
Query: 327 ITSPAP 344
T P
Sbjct: 371 STGRQP 376
Score = 29.5 bits (63), Expect = 0.95
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 126 PNSVTLSPAP-SVDSSGSPQRGDTVTYAPAYAPSVPPTTQAASSGSN 263
P S + P P S+ SS P+R +++ APA P PP+ SS N
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLS-APAPPPIPPPSNGTVSSPPN 269
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 33.5 bits (73), Expect = 0.058
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +3
Query: 135 VTLSPAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAASSGSNHSDSDEEGQY--APPPR 308
+T+ P PSVD S P G +Y+ + AP+ P + ++++ + + + Y AP P
Sbjct: 45 LTIPPPPSVDHSAPPS-GPPPSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAAPQPY 103
Query: 309 SPKEAPITSPAPQNHPTQQHPHYRAQ 386
P+ P +P Q + +Y AQ
Sbjct: 104 PPQGG--YPQQPYYYPNQPN-YYPAQ 126
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 32.7 bits (71), Expect = 0.10
Identities = 24/89 (26%), Positives = 36/89 (40%)
Frame = +3
Query: 123 QPNSVTLSPAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAASSGSNHSDSDEEGQYAPP 302
+ S L+ P + S SP R + A +PS +TQ S+ S G +P
Sbjct: 13 ETKSAALNALPKIKISDSPNRHHNLVDAFMQSPSY--STQPKSAVEPLGLSFSPGYISPS 70
Query: 303 PRSPKEAPITSPAPQNHPTQQHPHYRAQH 389
+SP P+ SP+ + P P H
Sbjct: 71 SQSPHHGPVRSPSSRK-PLPASPSRTRDH 98
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.9 bits (69), Expect = 0.18
Identities = 30/117 (25%), Positives = 45/117 (38%)
Frame = +3
Query: 69 WTVDGFHHFHSXXXXXXXQPNSVTLSPAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAA 248
W + GF++ + + +PA S + S S TV+ AP S PP+ Q
Sbjct: 117 WILVGFNNNFGLAPRNYVEGMDASSAPA-SQEPSASGVNAPTVS-APNSMVSPPPSFQPP 174
Query: 249 SSGSNHSDSDEEGQYAPPPRSPKEAPITSPAPQNHPTQQHPHYRAQHREFFPNDMPE 419
S+ + + + PPP P A A N P + RA E P P+
Sbjct: 175 SAAAPATSLPSDYN-PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPK 230
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 31.9 bits (69), Expect = 0.18
Identities = 27/94 (28%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Frame = +3
Query: 147 PAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAASSGSNHSDSDEEGQYAPPPRS-PKEA 323
P VD G P + ++ +V PTTQ S S ++E A PP S KE
Sbjct: 375 PETEVDF-GEPLEVEAPSFVVQNNSAVQPTTQKTSEDSTDLHTNEIPNVAQPPSSFEKEN 433
Query: 324 PITSPAPQNHPTQQHPHYRAQHREFFPNDMPESN 425
+ +N P + + FPND E N
Sbjct: 434 NKDTSKLENPDISSSP--LSPTEDLFPNDPEEEN 465
Score = 28.7 bits (61), Expect = 1.7
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 16/120 (13%)
Frame = +3
Query: 129 NSVTLSPAP-SVDSSGSP--QRG-DTV-TYAPAYAPSVPPT----------TQAASSGSN 263
N + +SP P + +G+P Q G DT T A YAPS+PP T+ + S
Sbjct: 971 NRLPISPLPPQLHKTGTPSHQHGFDTAETTAKQYAPSIPPNFNPNVSIDTMTEGVALPSA 1030
Query: 264 HSDSDEEGQYAPPPRSPKEAPITSPAPQNHPTQQHPHYRAQ-HREFFPNDMPESNTNGRL 440
DSD+ + RS + + SP P P P + H P + +SN + RL
Sbjct: 1031 TLDSDKSSLH---KRSAELSRNNSPRPDFLPLPNQPLLHSNLHSPVSP--VVDSNEDSRL 1085
>SPBC30B4.03c |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 31.9 bits (69), Expect = 0.18
Identities = 29/98 (29%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Frame = +3
Query: 144 SPAPSVDSSGSPQRGDTVTYAPAYA-PSVPPTTQA-ASSGSNHSDSDEEGQYAPPPRSPK 317
+PAPS +GSP+ GD + A Y PPT A A S +N P P+
Sbjct: 283 NPAPS-GFNGSPRNGDVASLASNYRYAKQPPTMPANAISQANRLLDQNNIPNMDPSILPQ 341
Query: 318 EAPITSPAPQNHPTQQHPHYRAQHREFFPNDMPESNTN 431
PI S P + Q + H + P +N N
Sbjct: 342 SMPIASVPPY---SLQGIKRQGTHSPMVEGENPNNNPN 376
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 31.9 bits (69), Expect = 0.18
Identities = 29/104 (27%), Positives = 40/104 (38%), Gaps = 2/104 (1%)
Frame = +3
Query: 126 PNSVTLSPAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAASSGSNHSDSDEEGQYAP-- 299
P S + SP S SP T A +PS PT+ + S ++ S S Y+P
Sbjct: 1580 PTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSP-TSPSYSPTSPSYSPTS 1638
Query: 300 PPRSPKEAPITSPAPQNHPTQQHPHYRAQHREFFPNDMPESNTN 431
P SP + +P PT P Y + P S T+
Sbjct: 1639 PSYSPTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTS 1680
Score = 31.1 bits (67), Expect = 0.31
Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Frame = +3
Query: 126 PNSVTLSPAPSVDSSGSPQRGDTV-TYAPAYAPSVPPTTQAASSGSNHSDSDEEGQYAP- 299
P S + SP S SP T +Y+P +PS PT+ + S ++ S S Y+P
Sbjct: 1615 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSP-TSPSYSPTSPSYSPT 1672
Query: 300 -PPRSPKEAPITSPAPQNHPTQQHPHYRAQHREFFPNDMPESNTN 431
P SP + +P PT P Y + P S T+
Sbjct: 1673 SPSYSPTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTS 1715
Score = 31.1 bits (67), Expect = 0.31
Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Frame = +3
Query: 126 PNSVTLSPAPSVDSSGSPQRGDTV-TYAPAYAPSVPPTTQAASSGSNHSDSDEEGQYAP- 299
P S + SP S SP T +Y+P +PS PT+ + S ++ S S Y+P
Sbjct: 1643 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSP-TSPSYSPTSPSYSPT 1700
Query: 300 -PPRSPKEAPITSPAPQNHPTQQHPHYRAQHREFFPNDMPESNTN 431
P SP + +P PT P Y + P S T+
Sbjct: 1701 SPSYSPTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTS 1743
Score = 30.3 bits (65), Expect = 0.54
Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 2/104 (1%)
Frame = +3
Query: 126 PNSVTLSPAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAASSGSNHSDSDEEGQYAP-- 299
P S +SP + S + +PAY PS P + + S S S S Y+P
Sbjct: 1542 PFSSAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPS-----YSPTS 1596
Query: 300 PPRSPKEAPITSPAPQNHPTQQHPHYRAQHREFFPNDMPESNTN 431
P SP ++ +P PT P Y + P S T+
Sbjct: 1597 PSYSPTSPSYSATSPSYSPTS--PSYSPTSPSYSPTSPSYSPTS 1638
Score = 29.1 bits (62), Expect = 1.3
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +3
Query: 126 PNSVTLSPAPSVDSSGSPQRGDTV-TYAPAYAPSVPPTTQAASSGSNHSDSDEEGQYAP- 299
P S + SP S SP T +Y+P +PS PT+ + S ++ S S Y+P
Sbjct: 1671 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSP-TSPSYSPTSPSYSPT 1728
Query: 300 -PPRSPKEAPITSPAPQNHPT 359
P SP + +P PT
Sbjct: 1729 SPSYSPTSPSYSPTSPSYSPT 1749
Score = 27.1 bits (57), Expect = 5.1
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Frame = +3
Query: 126 PNSVTLSPAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAASSGSNHSDSDEEGQYAP-- 299
P+S + SP S SP +Y+P PS PT+ + S+ ++ S S Y+P
Sbjct: 1573 PSSPSYSPTSPSYSPTSP------SYSPTS-PSYSPTSPSYSA-TSPSYSPTSPSYSPTS 1624
Query: 300 PPRSPKEAPITSPAPQNHPTQQHPHYRAQHREFFPNDMPESNTN 431
P SP + +P PT P Y + P S T+
Sbjct: 1625 PSYSPTSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTS 1666
>SPCPJ732.01 |vps5||retromer complex subunit
Vps5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 576
Score = 31.1 bits (67), Expect = 0.31
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 13/128 (10%)
Frame = +3
Query: 129 NSVTLSPAPSVDSSGSP---QRGDTVTYAPAYAPSVPPTTQAASSGSNHSDS--DEEGQY 293
NS + SP + ++ P Q DT+ A + AP+ T +ASS S S D E Q
Sbjct: 130 NSFSPSPIGATENPTIPNSEQTVDTLDAASSSAPNFTHTVSSASSQKQGSTSLTDTENQK 189
Query: 294 APPPRSPKE-----APITSPAPQNHPTQQHPHYRAQHREFFPNDMPESNTNGRLLWD--- 449
A P +P+ + P T+ H Y R N SN + ++
Sbjct: 190 AHPAAAPQSLTPFYIQVHDPHTVKEITKSHTVYSVSTRLEEHNQPSVSNVTVQRRYNDFA 249
Query: 450 FLQQLLND 473
FL QLL++
Sbjct: 250 FLYQLLSN 257
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 30.7 bits (66), Expect = 0.41
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +3
Query: 132 SVTLSPAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAASSGSNHSDSDEEGQYAPPPRS 311
S L P S SP + PA +PP + + ++G N D+ GQ +
Sbjct: 820 SSILPTVPRTTSYTSPYATTSSHITPADVHPLPPPSTSTTAGWN--DAPMLGQLPMRRAA 877
Query: 312 PKEAPITSPAP 344
P AP+ SP P
Sbjct: 878 PSMAPVRSPFP 888
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 29.9 bits (64), Expect = 0.72
Identities = 23/91 (25%), Positives = 33/91 (36%), Gaps = 4/91 (4%)
Frame = +3
Query: 144 SPAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAASSGSNHSDSDEEGQYAPPPRSPKEA 323
SP P+ + +P VT S+ T + + H+ S+ APP
Sbjct: 369 SPNPNPTLAPNPTGPSRVTSGTEDLLSLDATPFSPTLAPQHTSSNATKHSAPPVTKSAPF 428
Query: 324 PITSPAPQNH----PTQQHPHYRAQHREFFP 404
P+ SP NH PT + FFP
Sbjct: 429 PVVSPLQLNHTPGFPTSPAAKPNSPTSTFFP 459
>SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 296
Score = 29.5 bits (63), Expect = 0.95
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = +3
Query: 477 TQRYTNYIAWKNRDTGVFKIVDPAGLAKLWGIQKNHLSMNYDKMSRALRYYYRVNILRKV 656
TQ+ T Y+ KN D V ++ A LAK + + H+ AL +V
Sbjct: 63 TQKNTIYVFAKNNDVSVPEVF-AAKLAKHFVDKYKHIH------GAALDITITPWTRMEV 115
Query: 657 QGERHCYQFLRNPTELK 707
QG+ H + F+RNP E +
Sbjct: 116 QGKPHSHSFIRNPGETR 132
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 29.5 bits (63), Expect = 0.95
Identities = 19/76 (25%), Positives = 28/76 (36%)
Frame = +3
Query: 126 PNSVTLSPAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAASSGSNHSDSDEEGQYAPPP 305
P LS +P G+T A + + P T AA H EE + P P
Sbjct: 368 PKKSFLSKFKLTSRPSTPNVGNTAPDALSSPRNDSPLTSAADEQMKHLSLQEEPKQNPTP 427
Query: 306 RSPKEAPITSPAPQNH 353
+P P ++ P +
Sbjct: 428 AAPGAFPNSNTLPPRY 443
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.7
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +3
Query: 126 PNSVTLSPAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAASSGSNHSDSDEEGQYAPP- 302
P +V P PS+ S + Q +V APA APS T + S H S APP
Sbjct: 1486 PPAVPNVPVPSMIPSVAQQPPSSV--APATAPS--STLPPSQSSFAHVPSP-----APPA 1536
Query: 303 PRSPKEAPITS-PAPQNHPTQQHPH 374
P+ P A ++S PA + P + P+
Sbjct: 1537 PQHPSAAALSSAPADNSMPHRSSPY 1561
Score = 27.5 bits (58), Expect = 3.8
Identities = 19/68 (27%), Positives = 24/68 (35%)
Frame = +3
Query: 204 APAYAPSVPPTTQAASSGSNHSDSDEEGQYAPPPRSPKEAPITSPAPQNHPTQQHPHYRA 383
APA+ S PP +++ S PPP S P P P P+ P A
Sbjct: 1682 APAHPVSTPPVRPQSAAPPQMSAPTPP----PPPMSVPPPPSAPPMPAGPPSAPPPPLPA 1737
Query: 384 QHREFFPN 407
PN
Sbjct: 1738 SSAPSVPN 1745
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 28.7 bits (61), Expect = 1.7
Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Frame = +3
Query: 219 PSVPPTTQAASSGSNHSDSDEEGQYAPPPRSPKEAPITSPAPQNHPTQQHPHYRAQHREF 398
PSV + SS NH+++ Q P R+P Q H ++ A+H
Sbjct: 352 PSVFDNNKPVSS-DNHNNTTTSSQVHPDSRNPDPKAAPKAVSQKTNVDGHRNHEAKHGNT 410
Query: 399 FPND---MPESNTNGR 437
N+ SN GR
Sbjct: 411 VQNESKSQKSSNKEGR 426
>SPBC800.09 |sum2||G2/M transition checkpoint protein
Sum2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 28.7 bits (61), Expect = 1.7
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Frame = +3
Query: 216 APSVPPTTQAASSGSNHSDSD-EEGQYAPPPR----SPKEAPITSPAPQNHPTQQHPHYR 380
AP V P A GSN + + Q A PP+ +P AP P P +P+
Sbjct: 85 APPVQPPNDPAIIGSNSGQYNWNQAQTAQPPQPVQPNPYGAPYQQAPPAGAPYYMYPNAP 144
Query: 381 AQ 386
AQ
Sbjct: 145 AQ 146
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 28.3 bits (60), Expect = 2.2
Identities = 20/77 (25%), Positives = 29/77 (37%)
Frame = +3
Query: 207 PAYAPSVPPTTQAASSGSNHSDSDEEGQYAPPPRSPKEAPITSPAPQNHPTQQHPHYRAQ 386
P ++ S P T ASS S E + PP + + +P PHY +
Sbjct: 192 PIHSLSNPST---ASSLEPSSPLGSEDECHPPTSDMQPTHELNESPSTPTAPDFPHYNSS 248
Query: 387 HREFFPNDMPESNTNGR 437
E P S +NG+
Sbjct: 249 PSELSPTQRRSSISNGK 265
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.9
Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 2/84 (2%)
Frame = +3
Query: 138 TLSPAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQA--ASSGSNHSDSDEEGQYAPPPRS 311
T +P SSG+P V + PS+P + A + S + APP
Sbjct: 1047 TSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPK 1106
Query: 312 PKEAPITSPAPQNHPTQQHPHYRA 383
P A PAP P P A
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAA 1130
Score = 27.1 bits (57), Expect = 5.1
Identities = 27/88 (30%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Frame = +3
Query: 126 PNSVTLSPAPSVDSSGSPQRGDTV--TYAPAYAPSVPPTTQAASSGSNHSDSDEEGQYAP 299
P+ + P PSV + P+ V AP+ AP VP + AA S AP
Sbjct: 1088 PSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG-------AP 1140
Query: 300 PPRSPKEAPITSPAPQNHPTQQHPHYRA 383
P P A PAP P P A
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAA 1168
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 27.5 bits (58), Expect = 3.8
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +3
Query: 300 PPRSPKEAPITS--PAPQNHPTQQHPHYRAQHREFFPNDMPESNTN 431
P RS P +S PAP H + P +H E FP+ SN +
Sbjct: 63 PFRSTSLQPPSSQPPAPPTHQREASPVKNIEHSESFPSVFGTSNNH 108
>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 135 VTLSPAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAASSGSNHSDS 275
V++ + D P+ ++TY PA+ SV P + GS SDS
Sbjct: 130 VSMFKCSTADPGILPRNAYSLTYNPAHPWSVIPEDRKVLVGSTRSDS 176
>SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 27.5 bits (58), Expect = 3.8
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 126 PNSVTLSPAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAASSGSNHSDSDEE 284
P ++SP P S S +RG T +A + S + + S S+ S+SD +
Sbjct: 51 PKDESISPTPISYSFRSLRRGHTSGHASEHTSSSRSSHDESDSMSSSSESDSD 103
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 27.1 bits (57), Expect = 5.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 204 APAYAPSVPPTTQAASSGSNHSDSDEEGQYAPPP 305
AP+ A SVPPT+ A ++ N SD E + P P
Sbjct: 93 APSSAQSVPPTSSAETTADN---SDTEMKLNPIP 123
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 27.1 bits (57), Expect = 5.1
Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 3/110 (2%)
Frame = +3
Query: 72 TVD-GFHHFHSXXXXXXXQPNSVTLSPAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAA 248
TVD FHH H+ + TLS +P SS + + D ++ A PP A
Sbjct: 82 TVDIPFHHPHTIHSP------TFTLSVSPDSQSSSATHQNDYISSPHADFSFSPP----A 131
Query: 249 SSGSNHSDSDEEGQYAPPPRSPKEAPITSPAPQNHPTQQ--HPHYRAQHR 392
S +H ++ P S P++ P P+ +P Y A R
Sbjct: 132 SKIQSHEPLNDMAAVHPLRPSHVSGPLSPPEPKAASVDHSINPAYNASFR 181
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 26.6 bits (56), Expect = 6.7
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 285 PLHRNLNDYFRNW 247
PL++NLNDY+ +W
Sbjct: 758 PLNKNLNDYYPSW 770
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 129 NSVTLSPAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAASS 254
NS+ SPAPSV S G+ D + + + P T ++++
Sbjct: 125 NSLCHSPAPSVSSCGNALNNDNTSASHSLTDEQPFETDSSAN 166
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.6 bits (56), Expect = 6.7
Identities = 26/101 (25%), Positives = 32/101 (31%), Gaps = 2/101 (1%)
Frame = +3
Query: 159 VDSSGSPQRGDTVTYAPAYAPSVPPT--TQAASSGSNHSDSDEEGQYAPPPRSPKEAPIT 332
+ S SP G +PA P V P T A + H PPP +P
Sbjct: 706 IADSMSPM-GTGAVNSPAIKPQVTPAPPTPAPTPAVKHHPP-------PPPVRSSISPSM 757
Query: 333 SPAPQNHPTQQHPHYRAQHREFFPNDMPESNTNGRLLWDFL 455
PAP H P E P + LL + L
Sbjct: 758 PPAPLTHANSSTPMNYVSQPESPPQSYESIQNDNELLQELL 798
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 153 PSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAASSG 257
P +DSSGS D + A ++ T A+SG
Sbjct: 203 PYIDSSGSESESDNTRIKKSSAKTIKALTDPANSG 237
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 408 DMPESNTNGRLLWDFLQQLLNDPTQRYTNY 497
D P +N +++D +QQ+LN P + NY
Sbjct: 535 DYPWNNFLHNVVYDVVQQVLNAPMDKDQNY 564
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 26.2 bits (55), Expect = 8.8
Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 6/99 (6%)
Frame = +3
Query: 72 TVDGFHHFHSXXXXXXXQPNSVTLSPAPSV------DSSGSPQRGDTVTYAPAYAPSVPP 233
T H + P+ L+ +P+V + SG+ + T + + P
Sbjct: 54 TTHSRHRYPETPPSLPPPPSPGILATSPAVLQKHQQEDSGNSSQSPTSPHPSNQPAMLSP 113
Query: 234 TTQAASSGSNHSDSDEEGQYAPPPRSPKEAPITSPAPQN 350
+T A+ +HS S YA P SP + P N
Sbjct: 114 STAASQHHHHHSSS---SSYAVSPTSPTSPTSSGPIGSN 149
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,035,851
Number of Sequences: 5004
Number of extensions: 83359
Number of successful extensions: 372
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 327
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 633513876
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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