Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_J14
         (1153 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y15593-1|CAA75688.1|  795|Drosophila melanogaster nicotinic acet...    31   3.9  
AE014298-1164|AAF46361.2|  783|Drosophila melanogaster CG2302-PA...    31   3.9  
AE013599-2746|AAO41351.1| 1674|Drosophila melanogaster CG15086-P...    29   9.1  
AE013599-2745|AAO41350.1| 1497|Drosophila melanogaster CG15086-P...    29   9.1  
AE013599-2744|AAO41349.1| 2087|Drosophila melanogaster CG15086-P...    29   9.1  
AE013599-2743|AAF57655.1| 1908|Drosophila melanogaster CG15086-P...    29   9.1  

>Y15593-1|CAA75688.1|  795|Drosophila melanogaster nicotinic
            acetylcholine receptoralpha 3 subunit protein.
          Length = 795

 Score = 30.7 bits (66), Expect = 3.9
 Identities = 24/102 (23%), Positives = 41/102 (40%)
 Frame = -2

Query: 1014 PXD*HXHNSSSVTSLLXAYV*SASPINFTSDVPLVASQTEVLANPLFGQASCYPALGVPA 835
            P   H H + + T+     + + + I  T+ V  VA+ + +  +   G    +  +G  A
Sbjct: 537  PLPQHAHQAHASTTTSDLGMANPNVIKSTTTVNSVATASTLADSCCSGTIQIHQGMGAGA 596

Query: 834  CCYYAVDCELDQYHQTQVDHQKT*NQRVCFLVCSQVHHHGSR 709
             C  +      Q H  Q+ HQ+   Q+       Q HHH  R
Sbjct: 597  ACQSSELLHHQQLHHQQMHHQQQQQQQ-------QQHHHHQR 631


>AE014298-1164|AAF46361.2|  783|Drosophila melanogaster CG2302-PA
            protein.
          Length = 783

 Score = 30.7 bits (66), Expect = 3.9
 Identities = 24/102 (23%), Positives = 41/102 (40%)
 Frame = -2

Query: 1014 PXD*HXHNSSSVTSLLXAYV*SASPINFTSDVPLVASQTEVLANPLFGQASCYPALGVPA 835
            P   H H + + T+     + + + I  T+ V  VA+ + +  +   G    +  +G  A
Sbjct: 525  PLPQHAHQAHASTTTSDLGMANPNVIKSTTTVNSVATASTLADSCCSGTIQIHQGMGAGA 584

Query: 834  CCYYAVDCELDQYHQTQVDHQKT*NQRVCFLVCSQVHHHGSR 709
             C  +      Q H  Q+ HQ+   Q+       Q HHH  R
Sbjct: 585  ACQSSELLHHQQLHHQQMHHQQQQQQQ-------QQHHHHQR 619


>AE013599-2746|AAO41351.1| 1674|Drosophila melanogaster CG15086-PD,
           isoform D protein.
          Length = 1674

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -2

Query: 906 SQTEVLANPLFGQASCYPALGVPACCYYAVDCELDQ 799
           S+TEVL NPL    S Y   GVP    Y+ +C + +
Sbjct: 828 SRTEVLRNPLIQSRSEYDDNGVPPYESYSEECPVQR 863


>AE013599-2745|AAO41350.1| 1497|Drosophila melanogaster CG15086-PC,
           isoform C protein.
          Length = 1497

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -2

Query: 906 SQTEVLANPLFGQASCYPALGVPACCYYAVDCELDQ 799
           S+TEVL NPL    S Y   GVP    Y+ +C + +
Sbjct: 417 SRTEVLRNPLIQSRSEYDDNGVPPYESYSEECPVQR 452


>AE013599-2744|AAO41349.1| 2087|Drosophila melanogaster CG15086-PB,
            isoform B protein.
          Length = 2087

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -2

Query: 906  SQTEVLANPLFGQASCYPALGVPACCYYAVDCELDQ 799
            S+TEVL NPL    S Y   GVP    Y+ +C + +
Sbjct: 1007 SRTEVLRNPLIQSRSEYDDNGVPPYESYSEECPVQR 1042


>AE013599-2743|AAF57655.1| 1908|Drosophila melanogaster CG15086-PA,
           isoform A protein.
          Length = 1908

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -2

Query: 906 SQTEVLANPLFGQASCYPALGVPACCYYAVDCELDQ 799
           S+TEVL NPL    S Y   GVP    Y+ +C + +
Sbjct: 828 SRTEVLRNPLIQSRSEYDDNGVPPYESYSEECPVQR 863


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,209,985
Number of Sequences: 53049
Number of extensions: 473286
Number of successful extensions: 913
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6066567738
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)