Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_J13
         (1196 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_05_0036 + 8443957-8444112,8446063-8446129,8446685-8446743,844...    29   9.6  

>10_05_0036 +
           8443957-8444112,8446063-8446129,8446685-8446743,
           8446855-8446930,8447118-8447189,8447326-8447413,
           8447489-8447744,8447934-8448049,8448247-8448470,
           8448685-8448716,8448882-8449018,8449200-8449289,
           8449383-8449557
          Length = 515

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = +2

Query: 350 NEPLHATAEIFGGDRCDISIRRRFSLLHQWTWFLGTLGGFALLMVFLEDYK 502
           N+ L   A+    D CD+     +SLL  W W  G    F L  V   DYK
Sbjct: 447 NDYLTNLADSIREDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYYV---DYK 494


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,171,282
Number of Sequences: 37544
Number of extensions: 344367
Number of successful extensions: 1000
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3654850728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)