Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_J12
         (1215 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    36   0.22 
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    36   0.22 
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    36   0.22 
AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrom...    35   0.68 
AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.                35   0.68 

>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 36.3 bits (80), Expect = 0.22
 Identities = 29/88 (32%), Positives = 30/88 (34%), Gaps = 2/88 (2%)
 Frame = -3

Query: 493 PXGGGFFFXXXXXPPPPPPXKKKXXXPVXXFFFFXPFXXXPPPXXPXFXXRXLFFXPFFF 314
           P G    F     PPPPPP       P     F  P    PPP  P F     F  P   
Sbjct: 309 PPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSP-GTPPPPSPPSFPPHPDFAAP--- 364

Query: 313 XXFPPPXXFFFFXXPXPP--XXGGGXPP 236
              PPP    +   P PP     GG PP
Sbjct: 365 PPPPPPPAADYPTLPPPPLSQPTGGAPP 392


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 36.3 bits (80), Expect = 0.22
 Identities = 29/88 (32%), Positives = 30/88 (34%), Gaps = 2/88 (2%)
 Frame = -3

Query: 493 PXGGGFFFXXXXXPPPPPPXKKKXXXPVXXFFFFXPFXXXPPPXXPXFXXRXLFFXPFFF 314
           P G    F     PPPPPP       P     F  P    PPP  P F     F  P   
Sbjct: 309 PPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSP-GTPPPPSPPSFPPHPDFAAP--- 364

Query: 313 XXFPPPXXFFFFXXPXPP--XXGGGXPP 236
              PPP    +   P PP     GG PP
Sbjct: 365 PPPPPPPAADYPTLPPPPLSQPTGGAPP 392


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein
           protein.
          Length = 498

 Score = 36.3 bits (80), Expect = 0.22
 Identities = 29/88 (32%), Positives = 30/88 (34%), Gaps = 2/88 (2%)
 Frame = -3

Query: 493 PXGGGFFFXXXXXPPPPPPXKKKXXXPVXXFFFFXPFXXXPPPXXPXFXXRXLFFXPFFF 314
           P G    F     PPPPPP       P     F  P    PPP  P F     F  P   
Sbjct: 309 PPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSP-GTPPPPSPPSFPPHPDFAAP--- 364

Query: 313 XXFPPPXXFFFFXXPXPP--XXGGGXPP 236
              PPP    +   P PP     GG PP
Sbjct: 365 PPPPPPPAADYPTLPPPPLSQPTGGAPP 392


>AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrome
           protein family member 4 protein.
          Length = 625

 Score = 34.7 bits (76), Expect = 0.68
 Identities = 23/71 (32%), Positives = 24/71 (33%)
 Frame = -3

Query: 472 FXXXXXPPPPPPXKKKXXXPVXXFFFFXPFXXXPPPXXPXFXXRXLFFXPFFFXXFPPPX 293
           F     PPPPPP       P     F  P    PPP  P F     F  P      PPP 
Sbjct: 444 FAPPPAPPPPPPPMIGIPPPPPPIGFGSP-GTPPPPSSPSFPPHPDFAAP---PPLPPPP 499

Query: 292 XFFFFXXPXPP 260
              +   P PP
Sbjct: 500 AADYPTLPPPP 510


>AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.
          Length = 496

 Score = 34.7 bits (76), Expect = 0.68
 Identities = 23/71 (32%), Positives = 24/71 (33%)
 Frame = -3

Query: 472 FXXXXXPPPPPPXKKKXXXPVXXFFFFXPFXXXPPPXXPXFXXRXLFFXPFFFXXFPPPX 293
           F     PPPPPP       P     F  P    PPP  P F     F  P      PPP 
Sbjct: 315 FAPPPAPPPPPPPMIGIPPPPPPIGFGSP-GTPPPPSSPSFPPHPDFAAP---PPLPPPP 370

Query: 292 XFFFFXXPXPP 260
              +   P PP
Sbjct: 371 AADYPTLPPPP 381


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.311    0.145    0.469 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,824,407
Number of Sequences: 237096
Number of extensions: 2283910
Number of successful extensions: 17673
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14636
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17174423760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)