Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_J09
         (1185 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0411 + 3670758-3672365                                           33   0.44 
05_03_0245 + 10890555-10890962                                         30   4.1  
05_03_0244 + 10857139-10857516                                         30   4.1  
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814...    29   7.1  
02_05_1308 + 35601314-35601390,35602486-35602566,35603513-356040...    29   9.4  

>08_01_0411 + 3670758-3672365
          Length = 535

 Score = 33.1 bits (72), Expect = 0.44
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +1

Query: 361 CYXLGGLEASATGILGALSKPLSWSMPADKICEKLKXKXAQICDLRF 501
           CY   G    A  +   + KP  W MP +K    +    +Q+ DLRF
Sbjct: 261 CYAKNGCAREALAVFNRMLKPHVWVMPNEKTFSSVISACSQLGDLRF 307


>05_03_0245 + 10890555-10890962
          Length = 135

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = +3

Query: 195 CAGGPLTSXRCLRSVCAXCSAVCRHALSCC 284
           C GG           C  C+  C+H  SCC
Sbjct: 72  CCGGRCVDTGASGEHCGGCNKACKHGRSCC 101


>05_03_0244 + 10857139-10857516
          Length = 125

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = +3

Query: 195 CAGGPLTSXRCLRSVCAXCSAVCRHALSCC 284
           C GG           C  C+  C+H  SCC
Sbjct: 63  CCGGRCVDTGASGEHCGGCNKACKHGRSCC 92


>06_03_0874 -
           25580417-25580419,25580504-25580604,25580828-25581411,
           25581523-25581594,25581667-25581793,25583412-25583516,
           25583643-25583676
          Length = 341

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 10  APXXAFFXLPGGGAXLPXFRGFPLSHXPVFSWPCLNFSHP 129
           AP  ++   P G   +P ++ +P SH P   +P   + HP
Sbjct: 168 APSPSYALPPAGYPAVPPYQSYPASHVPA-PYPTSAYPHP 206


>02_05_1308 +
           35601314-35601390,35602486-35602566,35603513-35604064,
           35604998-35605408,35606830-35607544
          Length = 611

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = +1

Query: 577 WDEVCDGCIEKTDFIKRIEELKPKYMGRS 663
           WD VC G  ++TD+ +++EE+  + +GR+
Sbjct: 504 WDAVCSGGEDETDW-RKVEEILRRCIGRN 531


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,758,283
Number of Sequences: 37544
Number of extensions: 349908
Number of successful extensions: 830
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3608292120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)