Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_J09
         (1185 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024817-44|AAK93864.2|  168|Caenorhabditis elegans Hypothetical...   124   1e-28
Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical pr...    29   8.5  
Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical p...    29   8.5  
Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical p...    29   8.5  
Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical p...    29   8.5  

>AC024817-44|AAK93864.2|  168|Caenorhabditis elegans Hypothetical
           protein Y54G2A.23 protein.
          Length = 168

 Score =  124 bits (299), Expect = 1e-28
 Identities = 55/121 (45%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
 Frame = +1

Query: 295 PKKIEAAFKKFCKGSKHKANXFCYXLGGLEASATGILGALSKPLSWSMPADKIC-EKLKX 471
           P  I    ++ C+ +++K N FC+ +G L  SAT I+  ++KPLSWSMP +K+C EKLK 
Sbjct: 44  PDAIGKVIREHCETTRNKENKFCFYIGALPESATSIMNEVTKPLSWSMPTEKVCLEKLKG 103

Query: 472 KXAQICDLRFDKQIDLNNXXXXXXXXXXXXXXXNDWDEVCDGCIEKTDFIKRIEELKPKY 651
           K AQIC+L++DK +D                   +W EVC GC EK + IKRIEELKPKY
Sbjct: 104 KDAQICELKYDKPLDWKTIDLKKMRVKELKNILGEWGEVCKGCTEKAELIKRIEELKPKY 163

Query: 652 M 654
           +
Sbjct: 164 V 164


>Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = -2

Query: 776 INLQIHCPYYITQKVCM-MLISQCEC**FT*CIYLV*RSDLPMYLGFNSSILLMKSVFS 603
           +++Q+HCP  I   V M  +I+QC     T  + L  RSD   Y G  S + + ++V +
Sbjct: 143 LDVQMHCPSVIRDSVAMASVIAQCSYNLQT--LDLKIRSDNAKYAGIPSDVKIRRNVMT 199


>Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = -2

Query: 776 INLQIHCPYYITQKVCM-MLISQCEC**FT*CIYLV*RSDLPMYLGFNSSILLMKSVFS 603
           +++Q+HCP  I   V M  +I+QC     T  + L  RSD   Y G  S + + ++V +
Sbjct: 143 LDVQMHCPSVIRDSVAMASVIAQCSYNLQT--LDLKIRSDNAKYAGIPSDVKIRRNVMT 199


>Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical
           protein B0564.6b protein.
          Length = 423

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = -2

Query: 776 INLQIHCPYYITQKVCM-MLISQCEC**FT*CIYLV*RSDLPMYLGFNSSILLMKSVFS 603
           +++Q+HCP  I   V M  +I+QC     T  + L  RSD   Y G  S + + ++V +
Sbjct: 41  LDVQMHCPSVIRDSVAMASVIAQCSYNLQT--LDLKIRSDNAKYAGIPSDVKIRRNVMT 97


>Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.6a protein.
          Length = 525

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = -2

Query: 776 INLQIHCPYYITQKVCM-MLISQCEC**FT*CIYLV*RSDLPMYLGFNSSILLMKSVFS 603
           +++Q+HCP  I   V M  +I+QC     T  + L  RSD   Y G  S + + ++V +
Sbjct: 143 LDVQMHCPSVIRDSVAMASVIAQCSYNLQT--LDLKIRSDNAKYAGIPSDVKIRRNVMT 199


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,670,047
Number of Sequences: 27780
Number of extensions: 291989
Number of successful extensions: 588
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3245116438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)