Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_J05
(1176 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC100276-1|AAI00277.1| 88|Homo sapiens LYR motif containing 5 ... 105 3e-22
BC071769-1|AAH71769.1| 88|Homo sapiens LYR motif containing 5 ... 105 3e-22
CR541997-1|CAG46794.1| 128|Homo sapiens NDUFA6 protein. 31 6.1
CR456714-1|CAG32995.1| 128|Homo sapiens NDUFA6 protein. 31 6.1
CR456529-1|CAG30415.1| 154|Homo sapiens NDUFA6 protein. 31 6.1
BC002772-1|AAH02772.1| 128|Homo sapiens NDUFA6 protein protein. 31 6.1
AL021878-2|CAI19953.1| 154|Homo sapiens NADH dehydrogenase (ubi... 31 6.1
AF047182-1|AAC04267.1| 128|Homo sapiens NADH-ubiquinone oxidore... 31 6.1
AK056632-1|BAB71237.1| 757|Homo sapiens protein ( Homo sapiens ... 31 8.1
>BC100276-1|AAI00277.1| 88|Homo sapiens LYR motif containing 5
protein.
Length = 88
Score = 105 bits (252), Expect = 3e-22
Identities = 48/83 (57%), Positives = 62/83 (74%)
Frame = +2
Query: 338 MAQPHRKAVLNLYKTLLYLGRXWPQGFDLFRKRLHKVFSKNSEETDPQKIQIMVKHGEFV 517
MA R VL LYK LLYLGR +P+G D F+KRL +F KN + +P+KI+ ++ GEFV
Sbjct: 1 MANSLRGEVLKLYKNLLYLGRDYPKGADYFKKRLKNIFLKNKDVKNPEKIKELIAQGEFV 60
Query: 518 VKEIEALYKLKKYRAMKRRYYDD 586
+KE+EALY L+KYRAMK+RYY D
Sbjct: 61 MKELEALYFLRKYRAMKQRYYSD 83
>BC071769-1|AAH71769.1| 88|Homo sapiens LYR motif containing 5
protein.
Length = 88
Score = 105 bits (252), Expect = 3e-22
Identities = 48/83 (57%), Positives = 62/83 (74%)
Frame = +2
Query: 338 MAQPHRKAVLNLYKTLLYLGRXWPQGFDLFRKRLHKVFSKNSEETDPQKIQIMVKHGEFV 517
MA R VL LYK LLYLGR +P+G D F+KRL +F KN + +P+KI+ ++ GEFV
Sbjct: 1 MANSLRGEVLKLYKNLLYLGRDYPKGADYFKKRLKNIFLKNKDVKNPEKIKELIAQGEFV 60
Query: 518 VKEIEALYKLKKYRAMKRRYYDD 586
+KE+EALY L+KYRAMK+RYY D
Sbjct: 61 MKELEALYFLRKYRAMKQRYYSD 83
>CR541997-1|CAG46794.1| 128|Homo sapiens NDUFA6 protein.
Length = 128
Score = 31.5 bits (68), Expect = 6.1
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 428 RKRLHKVFSKNSEETDPQKIQIMVKHGEFVVKEIEALYKLKKYRAMKRRYYDD 586
R ++ ++F KN+ TDP+ + ++V G+ E+E K+ K R R++ +
Sbjct: 60 RDKVREMFMKNAHVTDPRVVDLLVIKGKI---ELEETIKVWKQRTHVMRFFHE 109
>CR456714-1|CAG32995.1| 128|Homo sapiens NDUFA6 protein.
Length = 128
Score = 31.5 bits (68), Expect = 6.1
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 428 RKRLHKVFSKNSEETDPQKIQIMVKHGEFVVKEIEALYKLKKYRAMKRRYYDD 586
R ++ ++F KN+ TDP+ + ++V G+ E+E K+ K R R++ +
Sbjct: 60 RDKVREMFMKNAHVTDPRVVDLLVIKGKI---ELEETIKVWKQRTHVMRFFHE 109
>CR456529-1|CAG30415.1| 154|Homo sapiens NDUFA6 protein.
Length = 154
Score = 31.5 bits (68), Expect = 6.1
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 428 RKRLHKVFSKNSEETDPQKIQIMVKHGEFVVKEIEALYKLKKYRAMKRRYYDD 586
R ++ ++F KN+ TDP+ + ++V G+ E+E K+ K R R++ +
Sbjct: 86 RDKVREMFMKNAHVTDPRVVDLLVIKGKI---ELEETIKVWKQRTHVMRFFHE 135
>BC002772-1|AAH02772.1| 128|Homo sapiens NDUFA6 protein protein.
Length = 128
Score = 31.5 bits (68), Expect = 6.1
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 428 RKRLHKVFSKNSEETDPQKIQIMVKHGEFVVKEIEALYKLKKYRAMKRRYYDD 586
R ++ ++F KN+ TDP+ + ++V G+ E+E K+ K R R++ +
Sbjct: 60 RDKVREMFMKNAHVTDPRVVDLLVIKGKI---ELEETIKVWKQRTHVMRFFHE 109
>AL021878-2|CAI19953.1| 154|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 6, 14kDa protein.
Length = 154
Score = 31.5 bits (68), Expect = 6.1
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 428 RKRLHKVFSKNSEETDPQKIQIMVKHGEFVVKEIEALYKLKKYRAMKRRYYDD 586
R ++ ++F KN+ TDP+ + ++V G+ E+E K+ K R R++ +
Sbjct: 86 RDKVREMFMKNAHVTDPRVVDLLVIKGKI---ELEETIKVWKQRTHVMRFFHE 135
>AF047182-1|AAC04267.1| 128|Homo sapiens NADH-ubiquinone
oxidoreductase subunit CI-B14 protein.
Length = 128
Score = 31.5 bits (68), Expect = 6.1
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 428 RKRLHKVFSKNSEETDPQKIQIMVKHGEFVVKEIEALYKLKKYRAMKRRYYDD 586
R ++ ++F KN+ TDP+ + ++V G+ E+E K+ K R R++ +
Sbjct: 60 RDKVREMFMKNAHVTDPRVVDLLVIKGKI---ELEETIKVWKQRTHVMRFFHE 109
>AK056632-1|BAB71237.1| 757|Homo sapiens protein ( Homo sapiens
cDNA FLJ32070 fis, clone OCBBF1000119. ).
Length = 757
Score = 31.1 bits (67), Expect = 8.1
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = -2
Query: 311 LFKDKSXESIHESNLSKLKTQXPMFXDVSIQRFXRRXLQINNFALTFADAXXQEXTLWRR 132
+F+D + + + L+ + D I+RF R Q NF + + + R
Sbjct: 371 VFRDWNSRIPRDVRDTVLEPYADPYYDYEIERFWRGG-QYENFRVQYTETEPYHNYRERE 429
Query: 131 KERKREQDGHRDLER 87
+ER+RE++ R+ ER
Sbjct: 430 RERERERERDREKER 444
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,875,855
Number of Sequences: 237096
Number of extensions: 1654558
Number of successful extensions: 6968
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6968
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16458822770
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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