Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_J04
(1160 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 116 5e-27
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 62 1e-10
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 54 4e-08
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 47 4e-06
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 46 1e-05
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 45 2e-05
SPAC2F3.02 |||ER protein translocation subcomplex subunit|Schizo... 36 0.014
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 31 0.23
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi... 31 0.31
SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|c... 30 0.70
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 27 3.8
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 27 3.8
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 26 8.7
SPAC1B9.02c |sck1||serine/threonine protein kinase Sck1|Schizosa... 26 8.7
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 26 8.7
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 116 bits (280), Expect = 5e-27
Identities = 78/232 (33%), Positives = 122/232 (52%), Gaps = 4/232 (1%)
Frame = +1
Query: 265 RNRLEDPEKKKASELKAKTTISLDNEENTTKVS-ESAIERAMKLKGAGNRAFHAGEYDKA 441
+ + ++ +K KA ++ + + EE+ ++ E + A +LK GN+A+ EY A
Sbjct: 111 KKKKKNKKKVKAKKVGDSSVDKIATEESVKSMTKEERAKLAAELKTLGNKAYGQKEYANA 170
Query: 442 IALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQVKEDCTFALKLNEKYVKAFLRR 621
I Y +AI C D P+ F+ NR+ACY +EQV +D + AL L+ YVKA RR
Sbjct: 171 IDYYTQAI-TCSHD-PI----FFSNRAACYAAIGDFEQVIKDTSEALSLDSSYVKALNRR 224
Query: 622 SRAAEKSGDLVLALEDVTSACILERFQVQSSLVNADRILKALGRQHAREALAKRSPVMPS 801
S A E+ G L AL D T +CI + F +S +R+LK + + + L +R P +P+
Sbjct: 225 SAAYEQLGKLDEALMDSTVSCIFDGFANESMTATVERLLKKVAEKKSSALLKERPPKLPA 284
Query: 802 KHFIKTYFSAFSEDPIAKIKVDDKTDG---FAKARKALDNXDYESXVDACTE 948
FI+TY +F P K D+K DG A+A + L+ +Y+ D E
Sbjct: 285 ASFIQTYLDSFHAQP--KPLFDNKFDGDAALAEAYEYLEKGEYQLSYDKAKE 334
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 62.1 bits (144), Expect = 1e-10
Identities = 41/109 (37%), Positives = 56/109 (51%)
Frame = +1
Query: 340 EENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNR 519
E++T V++ E A KLK GN A A +Y KA+ LY +AIE P PV +Y NR
Sbjct: 72 EDSTAHVNK---EEAEKLKLEGNNAIAAKDYQKALDLYTKAIEI-DPTSPV----YYSNR 123
Query: 520 SACYEKREMWEQVKEDCTFALKLNEKYVKAFLRRSRAAEKSGDLVLALE 666
+A Y + +E ED L L+ + +AF R RA GD A +
Sbjct: 124 AAAYNQLGQFENAVEDALTCLSLDPHHARAFGRLGRAKLSLGDAAAAAD 172
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 54.0 bits (124), Expect = 4e-08
Identities = 35/123 (28%), Positives = 54/123 (43%)
Frame = +1
Query: 325 ISLDNEENTTKVSESAIERAMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLAT 504
+ LD + T K + + K GN F G Y A Y+EA++ PD +A
Sbjct: 204 LKLDPDCTTAKTLFKQVRKLENTKNQGNDLFRQGNYQDAYEKYSEALQI-DPDNKETVAK 262
Query: 505 FYQNRSACYEKREMWEQVKEDCTFALKLNEKYVKAFLRRSRAAEKSGDLVLALEDVTSAC 684
Y NR+ + + E+ D AL ++ Y+K R++A E A+ DV SA
Sbjct: 263 LYMNRATVLLRLKRPEEALSDSDNALAIDSSYLKGLKVRAKAHEALEKWEEAVRDVQSAI 322
Query: 685 ILE 693
L+
Sbjct: 323 ELD 325
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 47.2 bits (107), Expect = 4e-06
Identities = 26/85 (30%), Positives = 42/85 (49%)
Frame = +1
Query: 376 ERAMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQ 555
E A + GN F + Y A Y +A+ D+ +++A Y NR+AC E + Q
Sbjct: 62 EVAQNFREHGNECFASKRYKDAEEFYTKALAQKCGDKDIEIAC-YSNRAACNLLFENYRQ 120
Query: 556 VKEDCTFALKLNEKYVKAFLRRSRA 630
V DC L+ + + KA+ R ++A
Sbjct: 121 VLNDCAQVLQRDSTHAKAYYRSAKA 145
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 45.6 bits (103), Expect = 1e-05
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 6/181 (3%)
Frame = +1
Query: 376 ERAMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQ 555
+ A++LK N+ G +AI LY +AIE + A Y NRS + K E +
Sbjct: 3 KEALELKNEANKFLKEGHIVQAIDLYTKAIELDSTN-----AILYSNRSLAHLKSEDYGL 57
Query: 556 VKEDCTFALKLNEKYVKAFLRRSRAAEKSGDLVLALEDVTSACILERFQ--VQSSLVNAD 729
D + A++ + +Y KA+ RR+ A A+ D A L + L +
Sbjct: 58 AINDASKAIECDPEYAKAYFRRATAHIAIFQPKEAVGDFRKALALAPSDPAARKKLRECE 117
Query: 730 RILKALGRQHAREALAKRSPV----MPSKHFIKTYFSAFSEDPIAKIKVDDKTDGFAKAR 897
+++K + Q A SP+ + Y E I K V+D + F + +
Sbjct: 118 QLVKRIRFQEAIHNTEPPSPLANINIEDMDIPSDYDGVILEKQITKEFVEDMKERFCQGK 177
Query: 898 K 900
K
Sbjct: 178 K 178
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 44.8 bits (101), Expect = 2e-05
Identities = 28/90 (31%), Positives = 40/90 (44%)
Frame = +1
Query: 382 AMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQVK 561
A +LK GN AF +Y AI + +AI + Y NRSACY + +
Sbjct: 2 AEELKAKGNAAFSKKDYKTAIDYFTQAIGLDERNH-----ILYSNRSACYASEKDYADAL 56
Query: 562 EDCTFALKLNEKYVKAFLRRSRAAEKSGDL 651
+D T +L + K + R+ A GDL
Sbjct: 57 KDATKCTELKPDWAKGWSRKGAALHGLGDL 86
Score = 42.7 bits (96), Expect = 9e-05
Identities = 24/85 (28%), Positives = 44/85 (51%)
Frame = +1
Query: 376 ERAMKLKGAGNRAFHAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQ 555
++A + + GN F +G++ AI Y E + P D + NR+A Y K +
Sbjct: 397 DKAEESRVKGNELFKSGDFANAIKEYTEMTKRAPSD-----PRGFGNRAAAYLKVMAPAE 451
Query: 556 VKEDCTFALKLNEKYVKAFLRRSRA 630
DC A++L+ + KA++R+++A
Sbjct: 452 CIRDCNKAIELDPNFAKAYVRKAQA 476
>SPAC2F3.02 |||ER protein translocation subcomplex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 35.5 bits (78), Expect = 0.014
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 8/119 (6%)
Frame = +1
Query: 388 KLKGAGNRAFHAGEYDKAIALYNEAIEA----CPPDRPV----DLATFYQNRSACYEKRE 543
K+K N AF +Y++A LY A++ C + + + + NR+A
Sbjct: 64 KMKQTANEAFKRKKYEEAKKLYGLALQLALNRCTWEPSILTREEASVMLCNRAAAEIALS 123
Query: 544 MWEQVKEDCTFALKLNEKYVKAFLRRSRAAEKSGDLVLALEDVTSACILERFQVQSSLV 720
+ + D ALK+ Y K + R+++A E + A + V IL ++ LV
Sbjct: 124 QFPEALADANAALKIRNNYGKCYYRKAKALEAMHRIEEAKQVVRDGLILAEPVTRNELV 182
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 31.5 bits (68), Expect = 0.23
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 364 ESAIERAMKLKGAGNRAFHAGEYDKAIALYNEAI 465
ES+ E A++ G + +AGEYDKA+ N+++
Sbjct: 2 ESSREEALRCIGLARKYLNAGEYDKALKFANKSL 35
>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
spliced|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 31.1 bits (67), Expect = 0.31
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +1
Query: 427 EYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQVKEDCTFALKLNEKYVK 606
E + I +++E + A + + Y + S + +++ + +V DCT+AL +N K
Sbjct: 19 ENTREIDVFDEFLNAIGNENTI--TPVYADSSLTHLRKKSYTKVVHDCTYALVINPYDKK 76
Query: 607 AFLRRSRAAEKSGDLVLALED 669
RR A + G LA D
Sbjct: 77 VIWRRGLAYLRLGHPHLANRD 97
>SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 577
Score = 29.9 bits (64), Expect = 0.70
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = +1
Query: 427 EYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQVKEDCTFALKLNEKYVK 606
+++ A+ + IE P+ +DL ++ R+ YEK + Q + D + LN + +
Sbjct: 21 KFEDALTFITKTIEQ-EPNPTIDL---FELRAQVYEKSGQYSQAELDAKRMIHLNARNAR 76
Query: 607 AFLRRSRAAEKSG 645
+LR + + G
Sbjct: 77 GYLRLGKLLQLDG 89
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 27.5 bits (58), Expect = 3.8
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +1
Query: 418 HAGEYDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQVKEDCTF--ALKLN 591
H Y+ + LYN ++ VDL Y +E E +++ ++ F KL+
Sbjct: 873 HLDSYNHMVELYNTLLQRLSSSDQVDLQCRY-----LHELSEFIKKIPKEFIFHTICKLS 927
Query: 592 EKYVKAFLRRS-RAAEKSGDLVLALEDVTSACILERFQVQSSLVNADRILKAL 747
+ + FL + EKS L + T+ CIL + +S A IL++L
Sbjct: 928 KGLIPCFLMNAFPQLEKSTTL---QKSCTNFCILILQLLLNSTATASNILESL 977
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 430 YDKAIALYNEAIEACPPDRPVDLATFYQNRSACYEKREMWEQVKEDCTFALK 585
+D+A YN A+ A PP++ +L + NRS ++ ++ E F L+
Sbjct: 221 WDQADYCYNRAVSAKPPNKS-ELKKYIWNRSVLNKEHGSLKKAAEGFKFLLQ 271
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 715 RSSALGISQGYMQMLHLQEQAQDRHFF 635
+ + L I QGY+ ++HL +Q Q ++F
Sbjct: 408 QDNRLNIIQGYLDLVHLSDQDQYDNWF 434
>SPAC1B9.02c |sck1||serine/threonine protein kinase
Sck1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 696
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -1
Query: 728 SAFTKELCTWNLSRIHADVTSSRASTRSPLFSAARDRRRNAFTYFSLSFNAKVQS 564
S F KE N+ I+ A+ +PL + +DR R FT+ + S + + Q+
Sbjct: 591 SNFDKEFTNTNVKNINIVSNVDPANASTPLSNTIQDRFR-GFTFVNKSIDEQFQN 644
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = -1
Query: 836 ENAEKYVLIKCFEGMTGLRLASASRACCRPNALRIRSAFTKELCTW 699
++ ++ + C EG+T + + C ALR+R+ + + CT+
Sbjct: 74 QDEDEQICFICAEGITYSCVLPCNHRMCHVCALRLRALYKTKECTF 119
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,101,784
Number of Sequences: 5004
Number of extensions: 82133
Number of successful extensions: 274
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 621560784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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