Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_J01
         (1230 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.38 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.85 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.85 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   2.6  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   4.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = -3

Query: 502 GXGVXGGGXGXGPKXXXPXPXGGGGCLNRXKXPXPPP 392
           G G  G     GP    P P  GG  LN      PPP
Sbjct: 515 GAGYDGRDLTGGPLGPPPPPPPGGAVLNIPPQFLPPP 551



 Score = 24.6 bits (51), Expect(2) = 0.38
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 429 PPPPXGXGXXXLGPXPXPPP 488
           PPPP G     + P   PPP
Sbjct: 532 PPPPPGGAVLNIPPQFLPPP 551



 Score = 22.2 bits (45), Expect(2) = 0.38
 Identities = 12/42 (28%), Positives = 13/42 (30%)
 Frame = +3

Query: 468 PXPXPPPXTPXPXSXGXGXXVXPPQXGXXXXPXNXGXXXXXP 593
           P P PPP    P S   G  +  P       P   G     P
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAP 624


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 27.5 bits (58), Expect = 0.85
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -1

Query: 954 GXPXXGXXGGXXXXXPXGGGGGXXPGGG 871
           G P  G  GG       GGG G   GGG
Sbjct: 845 GGPLRGSSGGAGGGSSGGGGSGGTSGGG 872



 Score = 25.4 bits (53), Expect = 3.4
 Identities = 13/40 (32%), Positives = 13/40 (32%)
 Frame = -1

Query: 990 GGGXXXKXXPEXGXPXXGXXGGXXXXXPXGGGGGXXPGGG 871
           GGG      P       G   G       GG GG   GGG
Sbjct: 824 GGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGG 863


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.5 bits (58), Expect = 0.85
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -2

Query: 521 PXXXGXGPGGXGXGXGXGAQXXXPXPXGGG 432
           P   G G GG   G G G+    P P GGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGG-PGPGGGG 228



 Score = 27.1 bits (57), Expect = 1.1
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -2

Query: 902 GGGGAXXRGGGXXXPGXXXXXPPPPGGXGG 813
           GGGG+   GGG    G      P PGG GG
Sbjct: 203 GGGGS---GGGAPGGGGGSSGGPGPGGGGG 229



 Score = 26.2 bits (55), Expect = 2.0
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = -2

Query: 902 GGGGAXXRGGGXXXPGXXXXXPPPPGGXGG 813
           G GG    GG     G     P P GG GG
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGG 230



 Score = 25.8 bits (54), Expect = 2.6
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = -1

Query: 909 PXGGGGGXXPGGGXXXXXGXXXXPPPPXGKXGXG 808
           P  GGGG   GGG     G     P P G  G G
Sbjct: 200 PGAGGGG--SGGGAPGGGGGSSGGPGPGGGGGGG 231



 Score = 25.4 bits (53), Expect = 3.4
 Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
 Frame = -3

Query: 514 PXDXGXGVXGGG-XGXGPKXXXPXPXGGGG 428
           P   G G  GG   G G     P P GGGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGG 229



 Score = 24.6 bits (51), Expect = 6.0
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 3/23 (13%)
 Frame = -1

Query: 930 GGXXXXXPXGGGG---GXXPGGG 871
           GG     P GGGG   G  PGGG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGG 227


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 15/40 (37%), Positives = 15/40 (37%)
 Frame = -3

Query: 547 PXWGGXTXFPXPXDXGXGVXGGGXGXGPKXXXPXPXGGGG 428
           P  GG    P P        GGG   G K     P GGGG
Sbjct: 495 PPPGGRPNAPNPSSAV--TPGGGRAEGDKVTFQIPNGGGG 532


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.0 bits (52), Expect = 4.5
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -1

Query: 903 GGGGGXXPGGGXXXXXGXXXXPPP 832
           GGGGG   GGG     G     PP
Sbjct: 549 GGGGGGGGGGGGVIGSGSTTRLPP 572


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,352
Number of Sequences: 2352
Number of extensions: 13467
Number of successful extensions: 104
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 140200221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)