Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_I22
         (1157 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1294 - 36076524-36076554,36076821-36076891,36077221-360772...    69   5e-12
05_05_0108 + 22451440-22451541,22452228-22452427,22452979-22453018     69   7e-12

>01_06_1294 -
           36076524-36076554,36076821-36076891,36077221-36077275,
           36077363-36077562,36078614-36078715
          Length = 152

 Score = 69.3 bits (162), Expect = 5e-12
 Identities = 36/82 (43%), Positives = 47/82 (57%)
 Frame = +1

Query: 154 LTAKAISIRPAXLKGLQTQHSKFVRDLVRXVVGHAQYEXRAMELLKVSXXXXXXXXXXXX 333
           +T + +  RP+  KG  T+   FVR L+R VVG A YE R  ELLKV             
Sbjct: 20  VTKRELPPRPSDRKGKSTKRVNFVRGLIREVVGFAPYEKRITELLKVGKDKRALKVAKRK 79

Query: 334 XGTHIRAKRKREELSNVLAQMR 399
            GTH RAK+KREE++ V+ +MR
Sbjct: 80  LGTHKRAKKKREEMAGVIRKMR 101


>05_05_0108 + 22451440-22451541,22452228-22452427,22452979-22453018
          Length = 113

 Score = 68.9 bits (161), Expect = 7e-12
 Identities = 36/82 (43%), Positives = 47/82 (57%)
 Frame = +1

Query: 154 LTAKAISIRPAXLKGLQTQHSKFVRDLVRXVVGHAQYEXRAMELLKVSXXXXXXXXXXXX 333
           +T + +  RP+  KG  T+   FVR+L+R V G A YE R  ELLKV             
Sbjct: 20  VTKRELPPRPSDRKGKSTKRVTFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRK 79

Query: 334 XGTHIRAKRKREELSNVLAQMR 399
            GTH RAK+KREE++ VL +MR
Sbjct: 80  LGTHKRAKKKREEMAGVLRKMR 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,293,285
Number of Sequences: 37544
Number of extensions: 272394
Number of successful extensions: 487
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3526513192
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)