Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_I20
(1184 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 138 1e-33
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 87 3e-18
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 73 1e-13
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 65 2e-11
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 60 6e-10
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 57 6e-09
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 48 2e-06
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 40 9e-04
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 36 0.008
SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 31 0.41
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 31 0.41
SPBC32H8.08c |||mannosyltransferase complex subunit |Schizosacch... 29 0.96
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 29 1.3
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 28 2.2
SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosacchar... 27 6.7
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 8.9
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 26 8.9
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 138 bits (335), Expect = 1e-33
Identities = 87/269 (32%), Positives = 145/269 (53%), Gaps = 6/269 (2%)
Frame = +2
Query: 158 LSQANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEXSPIKLAKVDATQEQ 337
+++ +IT + ++V+FYAPWCGHCK+LAPEY AA +L E I L +VD T+E
Sbjct: 27 VNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADEL--EKDGISLVEVDCTEEG 84
Query: 338 DLAESYGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELI 514
DL Y +RGYPTL F+NG I YSG R+ D ++ +++K+ P V+ S + + +
Sbjct: 85 DLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQL-LPTVKPISKDTLENFV 143
Query: 515 D-ANTVIVFGFFSDQSSARAKTFLSTAQVV-DDQVFAIVSDEKVIKELEAEDEDVVLFKN 688
+ A+ + V FF DQ T+ A+V+ DD VFA D+++ K L + +V F
Sbjct: 144 EKADDLAVVAFFKDQK--LNDTYTEVAEVMKDDFVFAASDDKELAKSLGSNFPGIVAFTK 201
Query: 689 ---FEEKRVKYEDEEITEDLLNAWVFVQSMPTIVEFSHETASKIFGGKIKYXLLIFLSKK 859
+ ++ Y + + + ++ V S+P + E + T K + ++ + S +
Sbjct: 202 DAAQDSDKLVYTGDWDPASIAD-FIGVSSIPLLDELNQMTFGKYQQSGLPLGIIFYNSTE 260
Query: 860 NGDFEKYLEDLKPVAKTYXDRIMTVAIDA 946
+ D E Y + +P+AK Y D + +DA
Sbjct: 261 SRD-ELY-DVFQPLAKKYQDTLRFAFLDA 287
Score = 89.8 bits (213), Expect = 6e-19
Identities = 45/117 (38%), Positives = 76/117 (64%), Gaps = 4/117 (3%)
Frame = +2
Query: 119 SESXVPTESNVLVLSQANFETVITT-TEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEX 295
S+ ++ +++VL NF+ ++ T+ +LVEFYAPWCGHCK+LAP Y K A + +++
Sbjct: 347 SQPIPESQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDD- 405
Query: 296 SPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG---SPIDYSGGRQADDIISWLKK 457
S + +AK+DAT E D+ S + G+PT+ FF+ +P+ Y G R +D+ +++ K
Sbjct: 406 SNVVVAKIDAT-ENDI--SVSISGFPTIMFFKANDKVNPVRYEGDRTLEDLSAFIDK 459
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 87.4 bits (207), Expect = 3e-18
Identities = 43/117 (36%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Frame = +2
Query: 179 TVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEXSPIKLAKVDATQEQDLAESYG 358
T+ + + L+EFYA WCGHCKSLAP Y + L E+ + + + K+DA D+A+ Y
Sbjct: 34 TIRASKKGALIEFYATWCGHCKSLAPVYEELGA-LFEDHNDVLIGKIDADTHSDVADKYH 92
Query: 359 VRGYPTLKFF-RNGS-PIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDAN 523
+ G+PTL +F +GS P+ YS R D + ++ +KTG ++ EL N
Sbjct: 93 ITGFPTLIWFPPDGSEPVQYSNARDVDSLTQFVSEKTGIKKRKIVLPSNVVELDSLN 149
Score = 78.6 bits (185), Expect = 2e-15
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Frame = +2
Query: 143 SNVLVLSQANFETVITTTEY-ILVEFYAPWCGHCKSLAPEYAKAATKLAEEXSPIKLAKV 319
SNV+ L NF+ V+ + +LVEFYA WCG+CK LAP Y + K+ + +++ K+
Sbjct: 140 SNVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTY-ETLGKVFKNEPNVEIVKI 198
Query: 320 DATQEQDLAESYGVRGYPTLKFF---RNGSPIDYSGGRQADDIISWLKKKTG 466
+A D+ + V +PT+KFF P Y G R + +I ++ KK+G
Sbjct: 199 NADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKKSG 250
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 72.5 bits (170), Expect = 1e-13
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Frame = +2
Query: 143 SNVLVLSQANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEXSPIKLAKVD 322
SN + L+ NF + LV FYAPWCG+CK L P Y K A+ L P+ D
Sbjct: 31 SNTIELNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTYQKLASNL-HSLLPVTAVDCD 89
Query: 323 ATQEQDLAESYGVRGYPTLKFF---RNGSPI---DYSGGRQADDIISWLKKKTGPPAVEV 484
A Q + + Y V+G+PT+K GS + DY+G R + ++ P V++
Sbjct: 90 ADQNRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTDYNGDRSYKSLQKFVSDSI-PSKVKI 148
Query: 485 TSAE 496
++E
Sbjct: 149 LTSE 152
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 65.3 bits (152), Expect = 2e-11
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Frame = +2
Query: 143 SNVLVLSQANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEXSPIKLAKVD 322
S + + S ++ + I + Y+ V+ YA WCG CK+++P +++ A+K A AKV+
Sbjct: 2 SVIEIRSYQHWISTIPKSGYLAVDCYADWCGPCKAISPLFSQLASKYAS--PKFVFAKVN 59
Query: 323 ATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGR--QA--DDIISWLKKKTGPPAVEVTS 490
+++ +A GV+ PT FF NG ID G QA + + K TG A+ +S
Sbjct: 60 VDEQRQIASGLGVKAMPTFVFFENGKQIDMLTGANPQALKEKVALISSKATGTGALASSS 119
Query: 491 AEQAK 505
+ K
Sbjct: 120 SAPVK 124
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 60.1 bits (139), Expect = 6e-10
Identities = 37/115 (32%), Positives = 55/115 (47%)
Frame = +2
Query: 113 SLSESXVPTESNVLVLSQANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEE 292
S + S + + N V S ++ T I+ + +V+FYA WCG CK L P KL+E+
Sbjct: 9 SFTSSRILRKVNA-VESFGDYNTRISADKVTVVDFYADWCGPCKYLKP----FLEKLSEQ 63
Query: 293 XSPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 457
V+A + D+A+ GV PT+ FR G +D G + S L K
Sbjct: 64 NQKASFIAVNADKFSDIAQKNGVYALPTMVLFRKGQELDRIVGADVKTLSSLLAK 118
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 56.8 bits (131), Expect = 6e-09
Identities = 24/85 (28%), Positives = 46/85 (54%)
Frame = +2
Query: 155 VLSQANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEXSPIKLAKVDATQE 334
V + F++++ + ++V+F+A WCG CK++AP++ + + S KVD Q
Sbjct: 5 VSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKF----EQFSNTYSDATFIKVDVDQL 60
Query: 335 QDLAESYGVRGYPTLKFFRNGSPID 409
++A GV P+ ++NG I+
Sbjct: 61 SEIAAEAGVHAMPSFFLYKNGEKIE 85
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 48.4 bits (110), Expect = 2e-06
Identities = 44/273 (16%), Positives = 113/273 (41%), Gaps = 7/273 (2%)
Frame = +2
Query: 122 ESXVPTESNVLVLSQANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEXSP 301
+S PT ++ + A+ + +T E ++FY+ C C ++ + A ++ +
Sbjct: 274 KSINPTGTSKALALDADIDAALTDKEGWFIQFYSSECDDCDDVSTAWYAMANRMRGK--- 330
Query: 302 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVE 481
+ +A ++ + + Y ++ +PT FF+ + ++Y G D++S+ ++ E
Sbjct: 331 LNVAHINCAVSKRACKQYSIQYFPTFLFFKEEAFVEYVGLPNEGDLVSFAEEAANFEIRE 390
Query: 482 VTSAEQAKELIDANTVIVFGFFSDQSSARAKTFL--STAQVVDDQVFAIVSDEKVIKELE 655
V + + N + F +F D SA + + Q++ + + +++ K+
Sbjct: 391 VELLDTVN--AEKNGDVFFLYFYDDDSAEYLNIIRKTGIQLLGHANLYLTTSQQIAKKYR 448
Query: 656 AEDEDVVLFKNFEEKRVKYEDEEITED-----LLNAWVFVQSMPTIVEFSHETASKIFGG 820
++ + Y ++ +D + W+ +P + E + +IF
Sbjct: 449 VVSFPKLIV--VRDGIASYYPAKMAQDNKDYRRILGWMKNNWLPVLPELRTSNSKEIFND 506
Query: 821 KIKYXLLIFLSKKNGDFEKYLEDLKPVAKTYXD 919
+ +L L+ + DF++ + +A + D
Sbjct: 507 --ESVVLFLLNPELDDFDETKRTAQKIATEFLD 537
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 209 VEFYAPWCGHCKSLAPEYAKAATKLAE--EXSPIKLAKVDATQEQDLAESYGVRGYPTLK 382
+++Y P CG CK L P + K E E S +VD ++E L+ +R PTL
Sbjct: 47 IKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKE--LSSCANIRAVPTLY 104
Query: 383 FFRNGSPID 409
++NG ++
Sbjct: 105 LYQNGEIVE 113
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 39.5 bits (88), Expect = 9e-04
Identities = 27/123 (21%), Positives = 50/123 (40%)
Frame = +2
Query: 197 EYILVEFYAPWCGHCKSLAPEYAKAATKLAEEXSPIKLAKVDATQEQDLAESYGVRGYPT 376
+ IL+ FYAPW CK + + + A++ K++A + D+AES+ V P
Sbjct: 21 QIILLNFYAPWAAPCKQMNQVF----DQFAKDTKNAVFLKIEAEKFSDIAESFDVNAVPL 76
Query: 377 LKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGFFSDQ 556
+ G + + + + P +++S + E N+V S+
Sbjct: 77 FVLIHGAKVLARISGANPQKLKAAIDEYIQPLISQISSTNASVE-TQVNSVQTTNTTSNT 135
Query: 557 SSA 565
S A
Sbjct: 136 SKA 138
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 36.3 bits (80), Expect = 0.008
Identities = 12/65 (18%), Positives = 36/65 (55%)
Frame = +2
Query: 302 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVE 481
+K+A+V+ +E+++ + ++ +PT + F+ I Y+G + ++S+ + A++
Sbjct: 230 LKMAQVNCDEEKEMCNHFHIKKFPTFRVFQGFDSIQYNGPLKYQQLLSYSNQVASYQAIK 289
Query: 482 VTSAE 496
+ +
Sbjct: 290 IEEGD 294
Score = 28.3 bits (60), Expect = 2.2
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +2
Query: 341 LAESYGVRGYPTLKFFRNGSPIDYSG--GRQADD---IISWLKKKTGPPAVEVT 487
LA YG + P++ RNG PI Y R+ D I W+ + P E+T
Sbjct: 343 LANKYGAQSQPSIIAVRNGMPIVYQAITPREFRDYKRITEWINIVSSPFITELT 396
>SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 822
Score = 30.7 bits (66), Expect = 0.41
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 991 FHAEELPDPLVFXFVGIDGDGHDPVXVGL-RDRLQI 887
F+ L P+ F FVG+DG GH P RDR I
Sbjct: 757 FNMSYLEAPIYFDFVGVDGVGHYPSKASEGRDRASI 792
>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
Hip3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1630
Score = 30.7 bits (66), Expect = 0.41
Identities = 18/75 (24%), Positives = 40/75 (53%)
Frame = +2
Query: 677 LFKNFEEKRVKYEDEEITEDLLNAWVFVQSMPTIVEFSHETASKIFGGKIKYXLLIFLSK 856
+ +NF++ R ++ + +LLN+ +V+F SK+ +++ +F++
Sbjct: 631 IVENFKQLRCLLQENSDSLELLNSQCMADLSVQVVDFE---LSKL--QTVEFFNTLFMNT 685
Query: 857 KNGDFEKYLEDLKPV 901
KN DF +++L+PV
Sbjct: 686 KNLDFNAVIKNLEPV 700
>SPBC32H8.08c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 29.5 bits (63), Expect = 0.96
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = +2
Query: 704 VKYEDEEITEDLLNAWVFVQSMPTIVEFSHETASKIFGGKIKYXLLIFLSKKNGDFEKYL 883
V+Y+++ D L+ W ++ + H+ + +F +K +L F + + + YL
Sbjct: 12 VEYQNDMKRYDTLHVWKLIKLLICKFLLFHDFGTALFTSLVKASMLGFHNWRR-TYWLYL 70
Query: 884 EDLKPVAKTY 913
+ L+P+ TY
Sbjct: 71 KKLRPINDTY 80
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 29.1 bits (62), Expect = 1.3
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Frame = +2
Query: 224 PWCG-HCKSLAPEYAKAATKLAEEXSPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS 400
PW + ++L + + KL E + K D + L G++ Y ++ F N
Sbjct: 226 PWKNPNTENLTSQVSIKEPKLYEPHPTTAIKKADGKIIRILVIDVGMK-YNQIRCFLNRG 284
Query: 401 ------PIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGF-FSDQS 559
P DY ++ D + ++ G P++ ++ K ++++ TV VFG F Q
Sbjct: 285 VELLVVPWDYDFTKETYDGL-FISNGPGDPSLMDLVVDRVKRVLESKTVPVFGICFGHQI 343
Query: 560 SARA 571
ARA
Sbjct: 344 MARA 347
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 582 RKVLALAELWSEKKPNTITVLASISSLACSAEVTSTA 472
+K +L + W + + LASISS A SA + ST+
Sbjct: 673 KKAASLPQFWLSPRSHNTARLASISSFAKSAVMNSTS 709
>SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 6.7
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +2
Query: 59 RSSRNALXXFSRLSPCXGSLSESXVPTESNVLVLSQANFETVITTTEYILVEFY 220
R +++ FSRL P + VPT++ ++S ++ + TT L++FY
Sbjct: 131 RQRLDSILNFSRLQPAYHIPARKSVPTDAYTPMVSYRKLKSKLKTT---LLDFY 181
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 26.2 bits (55), Expect = 8.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 327 VASTFASLIGDXSSASFVAALAYSGARDLQW 235
V++ F SL+G S FVA + R L+W
Sbjct: 1039 VSNIFKSLVGSMSCVEFVAEARETINRSLEW 1069
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.2 bits (55), Expect = 8.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 186 LQPRSTF*LNSMLHGAATANLWHRNTP 266
LQP T N +L+ + NLW R+ P
Sbjct: 634 LQPTITLGKNDLLNAILSQNLWFRSLP 660
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,949,248
Number of Sequences: 5004
Number of extensions: 73420
Number of successful extensions: 274
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 637498240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -