Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_I19
         (1191 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006834-10|AAF40005.1|  745|Caenorhabditis elegans Hypothetical...    42   6e-04
AL021497-10|CAD56614.1|  490|Caenorhabditis elegans Hypothetical...    30   2.8  
AL021497-9|CAA16397.1|  487|Caenorhabditis elegans Hypothetical ...    30   2.8  
AF016449-11|AAG23992.1|  353|Caenorhabditis elegans Serpentine r...    30   2.8  
L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated p...    29   6.5  

>AC006834-10|AAF40005.1|  745|Caenorhabditis elegans Hypothetical
           protein ZK973.1 protein.
          Length = 745

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 19/49 (38%), Positives = 33/49 (67%)
 Frame = +3

Query: 429 MNINAATEEQLMTLPGVNRQLAREIVRHRQMIGRFKRVDDLALVSGIGA 575
           +++N A++  L  + G+N + A+EIV++R+  GRF+   +L  V GIGA
Sbjct: 513 VDLNTASKNLLQRINGLNEKTAKEIVQYREQNGRFRSRAELKEVKGIGA 561



 Score = 38.3 bits (85), Expect = 0.011
 Identities = 18/45 (40%), Positives = 30/45 (66%)
 Frame = +3

Query: 699 INSSSVFQLQCVPGLNQEIAANIVDYRNRKGPFKSLDDLIKVRGM 833
           +N++S   LQ + GLN++ A  IV YR + G F+S  +L +V+G+
Sbjct: 515 LNTASKNLLQRINGLNEKTAKEIVQYREQNGRFRSRAELKEVKGI 559


>AL021497-10|CAD56614.1|  490|Caenorhabditis elegans Hypothetical
           protein Y51A2D.13b protein.
          Length = 490

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = +3

Query: 774 YRNRKGPFKSLDDLIK---VRGMDIVRLSTVKQHLSLELRKSESVQHLTNGHVNG 929
           YRN +  F ++DD I+   VRG+ I  L+    +  +  R   S++ L   H NG
Sbjct: 314 YRNPRVHFSNIDDAIRRAVVRGVKIRFLAAALHYPDIGTRFLRSLESLNGFHANG 368


>AL021497-9|CAA16397.1|  487|Caenorhabditis elegans Hypothetical
           protein Y51A2D.13a protein.
          Length = 487

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = +3

Query: 774 YRNRKGPFKSLDDLIK---VRGMDIVRLSTVKQHLSLELRKSESVQHLTNGHVNG 929
           YRN +  F ++DD I+   VRG+ I  L+    +  +  R   S++ L   H NG
Sbjct: 311 YRNPRVHFSNIDDAIRRAVVRGVKIRFLAAALHYPDIGTRFLRSLESLNGFHANG 365


>AF016449-11|AAG23992.1|  353|Caenorhabditis elegans Serpentine
           receptor, class t protein7 protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 384 SHTFSLPPSEEYPELMNINAAT 449
           +H+FSLPP  + PE +N++A T
Sbjct: 12  THSFSLPPEYDCPENVNVSATT 33


>L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated
            protein 36 protein.
          Length = 1249

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +3

Query: 585  ELLRPEICTHTRKQLSRASSCAHSLDSIRLPSESRLCSINSS--SVFQL 725
            E+   E C    K+ S+A+   +S+D     +E R CS + +  S+FQ+
Sbjct: 1190 EVKNEETCEENEKRKSKANDVCYSIDDDDSENERRPCSTSPTIVSIFQI 1238


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,270,376
Number of Sequences: 27780
Number of extensions: 496202
Number of successful extensions: 1218
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3265985354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)