Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_I18
(1240 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 36 0.087
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 32 1.1
01_01_1063 - 8386813-8387236,8387322-8387779 31 1.4
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 31 1.9
07_03_1160 - 24430240-24431268 31 1.9
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 31 2.5
11_06_0610 - 25449085-25453284 30 3.3
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 30 3.3
08_01_0059 - 394001-394708 30 3.3
07_01_0080 + 587674-588510 30 3.3
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 4.3
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979 30 4.3
05_01_0142 - 940421-940701,941262-941574 30 4.3
03_05_0576 + 25765137-25766420 30 4.3
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 30 4.3
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 26 4.7
12_02_1174 - 26696869-26698191 29 5.7
12_02_0299 - 17051570-17052474,17053542-17053755 29 5.7
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 5.7
03_02_0646 + 10141967-10142476,10143721-10144254 29 5.7
01_03_0005 + 11568545-11569119,11569179-11569191 29 5.7
11_01_0385 + 2915532-2916482 29 7.6
03_01_0515 - 3864796-3865425 29 10.0
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896... 29 10.0
01_01_0715 - 5542648-5543219,5543352-5543544 29 10.0
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 35.5 bits (78), Expect = 0.087
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 634 PKGPPPXKKXXKXPPXSKXEKPXGTIXXPXXPPXKXPGGPPXTXP 768
PKGPPP PP P G P PP GGPP P
Sbjct: 341 PKGPPPPPPAKGPPP---PPPPKGPSPPPPPPPGGKKGGPPPPPP 382
Score = 34.7 bits (76), Expect = 0.15
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 634 PKGPPPXKKXXKXPPXSKXEKPXGTIXXPXXPPXKXPGGPPXTXP 768
P PPP K PP P P PP K P PP P
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Score = 32.3 bits (70), Expect = 0.81
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +1
Query: 643 PPPXKKXXKXPPXSKXEKPXGTIXXPXXPPXKXPGGPPXTXP 768
PPP K PP +K P P PP PGG P
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPP 378
Score = 31.9 bits (69), Expect = 1.1
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = +1
Query: 634 PKGPPPXKKXXKXPPXSKXEKPXGTIXXPXXPPXKX--PGGPPXTXPAXYRXPVRLXPXG 807
P PPP K PP K P PP G PP P P P G
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372
Query: 808 KRG 816
K+G
Sbjct: 373 KKG 375
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 911 PXXSPGGXPPPPXWXPPPSXXXXTPPLXXXKAPLXP 804
P PPPP PPP PP K P P
Sbjct: 330 PPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPP 365
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = -3
Query: 887 PPPPXWXPPPSXXXXTPPLXXXKAPLXPXGKRRTG--XR*XAGXVXGGPP 744
PPPP PPP PP K P P + G GGPP
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPP 378
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 31.9 bits (69), Expect = 1.1
Identities = 21/68 (30%), Positives = 23/68 (33%), Gaps = 6/68 (8%)
Frame = +1
Query: 634 PKGPPPXKKXXKXPPXSKXEKPXGTIXXPXXPPXKXPGGPPXTXP------AXYRXPVRL 795
P+ P P K PP P P PP GPP P + R P L
Sbjct: 572 PQAPMPPLKASPVPPPEPSPPPAPKAAPPPPPPKSTGPGPPRPPPPAMPGSSKTRPPPPL 631
Query: 796 XPXGKRGA 819
P K GA
Sbjct: 632 KPGAKVGA 639
>01_01_1063 - 8386813-8387236,8387322-8387779
Length = 293
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 929 FXGXGAPXXSPGGXPPPPXWXPPPSXXXXTPPLXXXKAPLXP 804
+ G GAP PG PPP + P P PP AP P
Sbjct: 229 YVGHGAPH--PGMPPPPMPYGPHPHPHQPPPPAAAATAPSAP 268
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = -3
Query: 959 FFXPGGXXXVFXGXGAPXXSPGGXPPPPXWXPPPSXXXXTPPLXXXKAPL 810
F PGG V AP P G P P PPPS PP AP+
Sbjct: 43 FAPPGGNGPVPSSIRAPQAPPPGARPFPGSPPPPS--QPPPPFARPAAPV 90
>07_03_1160 - 24430240-24431268
Length = 342
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +1
Query: 634 PKGPP--PXKKXXKXPPXSKXEKPXGTIXXPXXPPXKXPGGPP 756
P GPP P + PP K + P + P PP P GPP
Sbjct: 94 PDGPPIPPVQPCPDQPPQPKPDGPP--LPNPNQPPQPNPNGPP 134
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 30.7 bits (66), Expect = 2.5
Identities = 26/94 (27%), Positives = 31/94 (32%)
Frame = +1
Query: 544 KXGGXPRKKXXXKRPXKGXXP*XGRVXXXXPKGPPPXKKXXKXPPXSKXEKPXGTIXXPX 723
K G P+ K +P G P + PK P P K K P P P
Sbjct: 158 KPGPKPKPKPSPPKPKPGPKP---KPPKPGPK-PKPPKPGPKPKPKPPKPGPKPKPKPPK 213
Query: 724 XPPXKXPGGPPXTXPAXYRXPVRLXPXGKRGAXS 825
P PG P P + P P G G+ S
Sbjct: 214 PGPKPKPGPPQPWWPIPFPKPP--CPPGADGSSS 245
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.3 bits (65), Expect = 3.3
Identities = 22/73 (30%), Positives = 25/73 (34%), Gaps = 1/73 (1%)
Frame = +1
Query: 586 PXKGXXP*XGRVXXXXP-KGPPPXKKXXKXPPXSKXEKPXGTIXXPXXPPXKXPGGPPXT 762
P K P + P K PPP PP K P + P PP K P PP
Sbjct: 1148 PEKSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILP-PPPVKSP--PPPA 1204
Query: 763 XPAXYRXPVRLXP 801
PV+ P
Sbjct: 1205 PVISPPPPVKSPP 1217
Score = 29.9 bits (64), Expect = 4.3
Identities = 28/119 (23%), Positives = 34/119 (28%), Gaps = 7/119 (5%)
Frame = +1
Query: 634 PKGPPPXKKXXKXPPXSKXEKPXGTIXXPXXP---PXKXPGGPPXT---XPAXYRXPVRL 795
PK PP +K PP S P P P P + PP + P P
Sbjct: 740 PKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPPEEKSPPPHSPEKSPPSEAHPTSP 799
Query: 796 XPXGKRGAXSXXRXXXXXXXXXXXXQXGGGGXPPGE-XXGAPXPXKTXXXPPGKKNXXP 969
P K G G PP +P P PP +K+ P
Sbjct: 800 PPSEKSPPTPAEESSPPTPEKSPSPPSGHEGTPPSPVKSSSPPPEAHVSSPPPEKSSSP 858
Score = 29.5 bits (63), Expect = 5.7
Identities = 22/73 (30%), Positives = 25/73 (34%), Gaps = 1/73 (1%)
Frame = +1
Query: 586 PXKGXXP*XGRVXXXXP-KGPPPXKKXXKXPPXSKXEKPXGTIXXPXXPPXKXPGGPPXT 762
P K P + P K PPP PP K P + P PP K P PP
Sbjct: 1164 PIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISP-PPPVKSP--PPPA 1220
Query: 763 XPAXYRXPVRLXP 801
PV+ P
Sbjct: 1221 PVILPPPPVKSPP 1233
Score = 29.1 bits (62), Expect = 7.6
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +1
Query: 586 PXKGXXP*XGRVXXXXP-KGPPPXKKXXKXPPXSKXEKPXGTIXXPXXPPXKXPGGP 753
P K P + P K PPP PP K P + P PP K P P
Sbjct: 1180 PVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPVKSPPPPAPVILP-PPPVKSPPPP 1235
Score = 28.7 bits (61), Expect = 10.0
Identities = 15/56 (26%), Positives = 16/56 (28%)
Frame = +1
Query: 643 PPPXKKXXKXPPXSKXEKPXGTIXXPXXPPXKXPGGPPXTXPAXYRXPVRLXPXGK 810
PPP PP P PP K P P P + P GK
Sbjct: 841 PPPEAHVSSPPPEKSSSPPPEAHVSSPPPPEKSPPPPETKSPPTLTPEISPPPEGK 896
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 911 PXXSPGGXPPPPXWXPPPSXXXXTPPLXXXKAPLXP 804
P +P PPPP PPP +PP K+P P
Sbjct: 1153 PPPAPVILPPPPIKSPPPPAPVISPP-PPVKSPPPP 1187
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 911 PXXSPGGXPPPPXWXPPPSXXXXTPPLXXXKAPLXP 804
P +P PPPP PPP +PP K+P P
Sbjct: 1185 PPPAPVILPPPPVKSPPPPAPVISPP-PPVKSPPPP 1219
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 30.3 bits (65), Expect = 3.3
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 914 APXXSPGGXPPPPXWXPPPSXXXXTPP 834
AP + PPPP + PPP +PP
Sbjct: 396 APTFTYSSPPPPPLYYPPPPDISPSPP 422
>08_01_0059 - 394001-394708
Length = 235
Score = 30.3 bits (65), Expect = 3.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -3
Query: 911 PXXSPGGXPPPPXWXPPPSXXXXTPPLXXXKAPLXP 804
P P PPPP PPP PP + P P
Sbjct: 3 PPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPP 38
Score = 28.7 bits (61), Expect = 10.0
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +1
Query: 643 PPPXKKXXKXPPXSKXEKPXGTIXXPXXPPXKXPGGPPXTXPAXYRXP 786
PPP PP + P P PP + P PP T P Y P
Sbjct: 2 PPPPPPRRAPPPPATPPPPPRRAPPPPSPPIRPP--PPPT-PRPYAPP 46
>07_01_0080 + 587674-588510
Length = 278
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = -3
Query: 911 PXXSPGGXPPPPXWXPPPSXXXXTPPLXXXKAPLXPXGKRRTG 783
P G PPPP PPP PPL ++ TG
Sbjct: 96 PPPPSSGSPPPPPPPPPPPPPPPPPPLFTRRSHAPQDNSSGTG 138
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.9 bits (64), Expect = 4.3
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 634 PKGPPPXKKXXKXPPXSKXEKPXGTIXXPXXPPXKXPGGPPXTXP 768
P GPPP PP P P P P PP T P
Sbjct: 1126 PDGPPPLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPP 1170
>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
Length = 304
Score = 29.9 bits (64), Expect = 4.3
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +1
Query: 634 PKGPPPXKKXXKXPPXSKXE--KPXGTIXXPXXPPXKXPGG 750
P PPP + + PP +K + KP P PP K P G
Sbjct: 56 PPPPPPPQPAKEPPPPTKPKHPKPKQQQHPPPPPPQKPPQG 96
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 29.9 bits (64), Expect = 4.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 899 PGGXPPPPXWXPPPSXXXXTPP 834
PG PPPP PPP PP
Sbjct: 44 PGAYPPPPGAYPPPPGAYPPPP 65
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 899 PGGXPPPPXWXPPPSXXXXTPP 834
P G PPPP PPP PP
Sbjct: 37 PQGYPPPPGAYPPPPGAYPPPP 58
>03_05_0576 + 25765137-25766420
Length = 427
Score = 29.9 bits (64), Expect = 4.3
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -3
Query: 914 APXXSPGGXPPPPXWXPPPSXXXXTPPLXXXKAPLXP 804
+P P PPPP PP + +PP P P
Sbjct: 78 SPPPQPSSPPPPPPSPPPAAAVSVSPPTQPRPRPELP 114
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -3
Query: 911 PXXSPGGXPPPPXWXPPPSXXXXTPPLXXXKAPLXP 804
P P PPPP PPP PP+ P P
Sbjct: 354 PPPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAP 389
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 914 APXXSPGGXPPPPXWXPPPSXXXXTPP 834
AP P PPPP PPP PP
Sbjct: 348 APKLMPPPPPPPPPPPPPPPPPPPRPP 374
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 25.8 bits (54), Expect(2) = 4.7
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3
Query: 902 SPGGXPPPPXWXPPPSXXXXTPPL 831
+P PPPP PP PPL
Sbjct: 761 APAPPPPPPQAPKPPGTVPPPPPL 784
Score = 22.2 bits (45), Expect(2) = 4.7
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -3
Query: 923 GXGAPXXSPGGXPPPP 876
G G P P PPPP
Sbjct: 705 GPGVPSAPPPPPPPPP 720
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 5.7
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 643 PPPXKKXXKXPPXSKXEKPXGTIXXPXXPPXKXPGGPPXTXP 768
PPP PP KP P PP P PP P
Sbjct: 154 PPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPP 195
Score = 29.1 bits (62), Expect = 7.6
Identities = 16/52 (30%), Positives = 20/52 (38%)
Frame = +1
Query: 634 PKGPPPXKKXXKXPPXSKXEKPXGTIXXPXXPPXKXPGGPPXTXPAXYRXPV 789
P PPP K P +P ++ P PP PP T P + PV
Sbjct: 160 PPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPP------PPPTRPPSVKPPV 205
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -3
Query: 887 PPPPXWXPPPSXXXXTPPLXXXKAPLXP 804
PPPP PPPS PPL APL P
Sbjct: 323 PPPPPPPPPPSFPWPFPPL----APLFP 346
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 5.7
Identities = 29/121 (23%), Positives = 32/121 (26%), Gaps = 2/121 (1%)
Frame = +1
Query: 595 GXXP*XGRVXXXXPKGPPPXKKXXKXPPXSKXEKPXGTIXXPXXPPXKXPGG--PPXTXP 768
G P + P PPP PP G P P + GG PP
Sbjct: 1096 GVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVG 1155
Query: 769 AXYRXPVRLXPXGKRGAXSXXRXXXXXXXXXXXXQXGGGGXPPGEXXGAPXPXKTXXXPP 948
P P G RG + GG P GAP P P
Sbjct: 1156 GLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPG 1215
Query: 949 G 951
G
Sbjct: 1216 G 1216
>03_02_0646 + 10141967-10142476,10143721-10144254
Length = 347
Score = 29.5 bits (63), Expect = 5.7
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = -3
Query: 914 APXXSPGGXPPPPXWXPPPSXXXXTPPLXXXKAPLXPXGKRRTG 783
A SP PPPP P P +AP+ P K G
Sbjct: 3 AAAASPSSSPPPPPMSPAPQAASPAEDRRGGRAPVPPYVKAAAG 46
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 29.5 bits (63), Expect = 5.7
Identities = 26/104 (25%), Positives = 31/104 (29%), Gaps = 5/104 (4%)
Frame = -3
Query: 887 PPPPXWXPPPSXXXXTPPLXXXKAPLXPXGKRRTGXR*XAGXVXGGPP-----GXFXGGX 723
P P + PPP TP P P G G PP G G
Sbjct: 49 PCNPSYYPPPPPPVVTPTPQCPPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGG 108
Query: 722 XGXFXVPXGFSXFDXGGXFXXFFXGGGPFGXXXXTRPFYGXWPF 591
G + P GG + GGG + PF +PF
Sbjct: 109 GGIYYPPPTGGGGGGGGGWQQGGGGGGAYPTPPPPNPFLPYFPF 152
>11_01_0385 + 2915532-2916482
Length = 316
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 637 KGPPPXKKXXKXPPXSKXEKPXGTIXXPXXPPXKXPGGPP 756
+ PPP K K PP SK G P P P PP
Sbjct: 109 RAPPPKKHHEKAPPKSKHH---GRHAPPDQPELSPPAPPP 145
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 911 PXXSPGGXPPPPXWXPPPSXXXXTPP 834
P PPPP PPPS +PP
Sbjct: 92 PPPPAASPPPPPPSPPPPSPVKSSPP 117
>01_01_1130 +
8959909-8960396,8960588-8960638,8960736-8960827,
8960964-8961054,8961877-8961937,8962172-8962216,
8962318-8962391,8962565-8962637,8963288-8963345,
8963398-8963468,8963801-8963837,8964040-8964128,
8964207-8964263,8964366-8964449,8964529-8964627,
8964765-8964869,8965145-8965216,8965308-8965497,
8965810-8966207
Length = 744
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 911 PXXSPGGXPPPPXWXPPPSXXXXTPP 834
P +P PPPP PPP+ TPP
Sbjct: 75 PPPTPPSPPPPPP--PPPTNGTLTPP 98
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 911 PXXSPGGXPPPPXWXPPPSXXXXTPP 834
P +P G PPPP PPP+ T P
Sbjct: 180 PAPAPAGSPPPP--PPPPAGGNFTAP 203
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,723,082
Number of Sequences: 37544
Number of extensions: 314071
Number of successful extensions: 2193
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1795
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3817805856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -