Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_I14
(1162 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 331 9e-92
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 91 4e-19
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 81 3e-16
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 81 4e-16
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 78 2e-15
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 73 8e-14
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 73 1e-13
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 69 9e-13
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 63 8e-11
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 62 1e-10
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 60 4e-10
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 56 1e-08
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 56 1e-08
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 54 4e-08
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 53 9e-08
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 52 2e-07
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 51 4e-07
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 34 0.043
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 29 0.93
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 28 2.8
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 28 2.8
SPAC3A11.04 |||siepin homolog|Schizosaccharomyces pombe|chr 1|||... 27 5.0
SPAC2F7.17 |||peptide chain release factor|Schizosaccharomyces p... 26 8.7
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 331 bits (814), Expect = 9e-92
Identities = 153/207 (73%), Positives = 170/207 (82%)
Frame = +3
Query: 159 LPTFKCVLVGAGGXGKTTFVKSHLXGAFEQKXVAPLGVEVHPLVFHTXRGPIRFNVWXTA 338
+PTFK VLVG GG GKTTFVK HL G FE+K +A LGVEVHPL FHT G I FNVW TA
Sbjct: 7 VPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTA 66
Query: 339 GQXXFGGLRXGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVDIK 518
GQ GGLR GYYIQGQC IIMFDVTSR+TYKNVP+W RDLVRVCE IPIVLCGNKVD+K
Sbjct: 67 GQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCENIPIVLCGNKVDVK 126
Query: 519 DRKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDGNLEFVAMPALLPPEV 698
+RKVKAK I FHRKKNLQYYDISAKSNYNFEKPFLWLARKL+G+ NLEFVA PAL PPEV
Sbjct: 127 ERKVKAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPNLEFVASPALAPPEV 186
Query: 699 TMDPQWQNQIEKDLQDAQNTALPEEDE 779
+D Q Q ++++ +A LP+ED+
Sbjct: 187 QVDQQLLAQYQQEMNEAAAMPLPDEDD 213
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 90.6 bits (215), Expect = 4e-19
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 3/161 (1%)
Frame = +3
Query: 168 FKCVLVGAGGXGKTTFVKSHLXGAFEQKXVAPLGVEVHPLVFHTXRGPIRFNVWXTAGQX 347
FK +L+G G GK+ + + + ++ +GV+ F ++ +W TAGQ
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 348 XFGGLRXGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVDIKDR 524
F + YY II++DVT + ++ NV W +++ R EG+ +L GNK D+ D+
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDK 128
Query: 525 KVKAKTIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKL 641
KV ++ F N+ + + SAK + N E+ FL ++R++
Sbjct: 129 KVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 81.0 bits (191), Expect = 3e-16
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Frame = +3
Query: 156 ALPTFKCVLVGAGGXGKTTFVKSHLXGAFEQKXVAPLGVEVHPLVFHTXRGPIRFNVWXT 335
+L FK V +G GKT+ + + F+ A +G++ + +R +W T
Sbjct: 8 SLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 67
Query: 336 AGQXXFGGLRXGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEG--IPIVLCGNKV 509
AGQ F L Y AII++D+T+ ++ N W D VR G + IVL GNK
Sbjct: 68 AGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIED-VRAERGDDVIIVLVGNKT 126
Query: 510 DIKDRKVKAKTIVFHRKKNLQ--YYDISAKSNYNFEKPFLWLARKLIGDGNLE 662
D+ D++ + + K L+ + + SAK+ +N + F +A+ L G N+E
Sbjct: 127 DLADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQMLPGMENVE 179
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 80.6 bits (190), Expect = 4e-16
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Frame = +3
Query: 171 KCVLVGAGGXGKTTFVKSHLXGAFEQKXVAPLGVEVHPLVFHTXRGP-IRFNVWXTAGQX 347
K VL+G GK++ V + F+ + +G ++ +W TAGQ
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 348 XFGGLRXGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-EGIPIVLCGNKVDI-KD 521
+ L YY CAI+++D+T + + +W ++L R EGI I L GNK+D+ ++
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 522 RKV--KAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 641
R+ KA + + NL +++ SAK+ N + F +A+KL
Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 78.2 bits (184), Expect = 2e-15
Identities = 45/190 (23%), Positives = 93/190 (48%), Gaps = 9/190 (4%)
Frame = +3
Query: 171 KCVLVGAGGXGKTTFVKSHLXGAFEQKXVAPLGVEVHPLVFHTXRGPIRFNVWXTAGQXX 350
K +++G G GKT+ + ++ F + A +G + + +W TAGQ
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 351 FGGLRXGYYIQGQCAIIMFDVTSRVTYKNVPNWHRD-LVRVC----EGIPIVLCGNKVDI 515
F L +Y C ++++DV + +++ + +W + L++ E P +L GNKVD+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDV 129
Query: 516 KDRK---VKAKTIVF-HRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDGNLEFVAMPAL 683
+++K K+K + F + + Y++ SAK N ++ F +A+ + + + + +A
Sbjct: 130 EEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENMDSDDIAADFT 189
Query: 684 LPPEVTMDPQ 713
P + M+ Q
Sbjct: 190 DPIHLDMESQ 199
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 72.9 bits (171), Expect = 8e-14
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Frame = +3
Query: 171 KCVLVGAGGXGKTTFVKSHLXGAFEQKXVAPLGVEVHPLVFHTXRGPIRFNVWXTAGQXX 350
K +L+G G GK+ + +F + +G++ I+ +W TAGQ
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 351 FGGLRXGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVDIKD-R 524
F + YY ++++DVT + ++ NV W ++ + E + +L GNK D +D R
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQR 130
Query: 525 KVK-AKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 641
+V + + +++ + SAK+N N ++ F LAR++
Sbjct: 131 QVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 72.5 bits (170), Expect = 1e-13
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 3/154 (1%)
Frame = +3
Query: 168 FKCVLVGAGGXGKTTFVKSHLXGAFEQKXVAPLGVEVHPLVFHTXRGPIRFNVWXTAGQX 347
FK VL+G G GK+ + F + + +GVE I+ +W TAGQ
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQE 70
Query: 348 XFGGLRXGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-GIPIVLCGNKVDIKD- 521
+ + YY A+I++D+T + ++ NV W ++L + I I+L GNK D+
Sbjct: 71 RYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHL 130
Query: 522 RKVKAKTI-VFHRKKNLQYYDISAKSNYNFEKPF 620
R V + F + NL + + SA N E+ F
Sbjct: 131 RAVSTEEAQAFAAENNLSFIETSAMDASNVEEAF 164
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 69.3 bits (162), Expect = 9e-13
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Frame = +3
Query: 159 LPTFKCVLVGAGGXGKTTFVKSHLXGAFEQKXVAPLGVEVHPLVFHTXRGPIRFNVWXTA 338
+PT KCV+VG G GKT + S+ F V P + + + P ++ TA
Sbjct: 1 MPTIKCVVVGDGAVGKTCLLISYTTNKFPSDYV-PTVFDNYAVTVMIGDEPYTLGLFDTA 59
Query: 339 GQXXFGGLRXGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDI 515
GQ + LR Y Q ++ F VTS +++NV W ++ C G+P ++ G ++D+
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDL 119
Query: 516 KD 521
+D
Sbjct: 120 RD 121
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 62.9 bits (146), Expect = 8e-11
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Frame = +3
Query: 171 KCVLVGAGGXGKTTFVKSHLXGAFEQKXVAPLGVEVHPLVFHTXRGPIRFNVWXTAGQXX 350
K V++G G GKT + + F ++ A +G + + +W TAGQ
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 351 FGGLRXGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE----GIPIVLCGNKVDIK 518
F L +Y C +I+++V + ++ +V NW ++ + P ++ GN++D K
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQID-K 128
Query: 519 DRKVKA----KTIVFHRKK---NLQYYDISAKSNYNFEKPFLWLAR 635
D +A + + + + K N+ +++ SAK N N F ++R
Sbjct: 129 DASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSR 174
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 62.1 bits (144), Expect = 1e-10
Identities = 40/166 (24%), Positives = 84/166 (50%), Gaps = 8/166 (4%)
Frame = +3
Query: 171 KCVLVGAGGXGKTTFVKSHLXGAFEQKXVAPLGVEVHPLVFHTXRGP----IRFNVWXTA 338
K VL G G GK+ ++ + ++ + +G++ + G I+ +W TA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 339 GQXXFGGLRXGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEG-IPIVLCGNKVDI 515
GQ F + YY A++++DVT++ +++ + +W D+ + I +VL G+K D+
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDL 130
Query: 516 KD-RKVKAKTIV-FHRKKNL-QYYDISAKSNYNFEKPFLWLARKLI 644
++ R+V + F +K++ ++ S+ + N E+ FL + +I
Sbjct: 131 QNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTII 176
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 60.5 bits (140), Expect = 4e-10
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
Frame = +3
Query: 159 LPTFKCVLVGAGGXGKTTFVKSHLXGAFEQKXVAPLGVEVHPLVFHTXRGPIRFNVWXTA 338
L +K V+VG GG GK+ + F + + G + +V TA
Sbjct: 6 LREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGAL-LDVLDTA 64
Query: 339 GQXXFGGLRXGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRV--CEGIPIVLCGNKVD 512
GQ + +R Y G+ ++++++TSR ++ + +++ ++RV + P+VL NK D
Sbjct: 65 GQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCD 124
Query: 513 IKDRKV--KAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 641
++ +V +A+ + + Y + SAK N E+ F L R +
Sbjct: 125 LEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTI 169
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 55.6 bits (128), Expect = 1e-08
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Frame = +3
Query: 171 KCVLVGAGGXGKTTFVKSHLXGAFEQKXVAPLGVEVHPLVFHTXRGPIRFNVWXTAGQXX 350
K V+VG G GKT + G F + V P E + I +W TAGQ
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYV-PTVFENYVADVEVDGRHIELALWDTAGQED 66
Query: 351 FGGLRXGYYIQGQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCEGIPIVLCGNKVDIKD 521
+ LR Y +I F V + + NV W +++ C +PI+L G KVD+++
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRN 124
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 55.6 bits (128), Expect = 1e-08
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Frame = +3
Query: 171 KCVLVGAGGXGKTTFVKSHLXGAFEQKXVAPLGVE--VHPLVFHTXRGPIRFNVWXTAGQ 344
K V+VG GG GKT + G F ++ V P E + + + I +W TAGQ
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYV-PTVFENYITDITYGPNSKVIELALWDTAGQ 74
Query: 345 XXFGGLRXGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDI-K 518
+ LR Y ++ F + + NV W+ ++ C PIVL G K D+ K
Sbjct: 75 EEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRK 134
Query: 519 DR 524
DR
Sbjct: 135 DR 136
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 54.0 bits (124), Expect = 4e-08
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Frame = +3
Query: 171 KCVLVGAGGXGKTTFVKSHLXGAFEQKXVAPLGVEVHPLVFHTXRGPIRFNVWXTAGQXX 350
K V+VG G GKT+ + G F + V P E + ++ +W TAGQ
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYV-PTVFENYVSDCRVDGKSVQLALWDTAGQEE 68
Query: 351 FGGLRXGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIKDRK 527
+ LR Y + ++ F + S + +NV W ++ +C +P +L G K D++
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDP 128
Query: 528 V 530
V
Sbjct: 129 V 129
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 52.8 bits (121), Expect = 9e-08
Identities = 27/116 (23%), Positives = 50/116 (43%)
Frame = +3
Query: 165 TFKCVLVGAGGXGKTTFVKSHLXGAFEQKXVAPLGVEVHPLVFHTXRGPIRFNVWXTAGQ 344
T K ++G GKT+ + +++ G+F+++ LGV I F++W GQ
Sbjct: 10 TIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQ 69
Query: 345 XXFGGLRXGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVD 512
F + + MFD++ + T ++ W+R + +L G K D
Sbjct: 70 REFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPILIGTKYD 125
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 52.0 bits (119), Expect = 2e-07
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Frame = +3
Query: 171 KCVLVGAGGXGKTTFVKSHLXGAFEQKXVAPLGVEVHPLVFHTXRGPIRFNVWXTAGQXX 350
K V++G G GKT+ + G F Q P E + I ++W TAGQ
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQ-VYEPTIFENYIHDIFVDGNSIELSLWDTAGQEE 73
Query: 351 FGGLRXGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIK--- 518
+ LR Y +I F V SR + +NV W ++ C G+ +VL K D++
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGAD 133
Query: 519 DRKVKAKTIVFH-------RKKN-LQYYDISAKSNYNFEKPFLWLAR 635
+ +V I+ + +K N ++Y + SAK N + F AR
Sbjct: 134 EEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAAR 180
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 50.8 bits (116), Expect = 4e-07
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = +3
Query: 171 KCVLVGAGGXGKTTFVKSHLXGAFEQKXVAPLGVEVHPLVFHTXRGPIRFNVWXTAGQXX 350
K V+VG G GKT + G F + V P E + + +W TAGQ
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYV-PTVFENYVADVEVDGRHVELALWDTAGQED 66
Query: 351 FGGLRXGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIKD 521
+ LR Y +I F V S + NV W +++ C +PI+L K D+++
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRN 124
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 33.9 bits (74), Expect = 0.043
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 9/166 (5%)
Frame = +3
Query: 171 KCVLVGAGGXGKTTFVKSHLXGAFEQKXVAP-LGVEVHPLVFHTXRGPIRFNVWXTAGQX 347
+ +L+G GKTT +K L + V+P G ++ L +RF +W GQ
Sbjct: 18 RVLLLGLDNAGKTTILKCLLNEDVNE--VSPTFGFQIRTLEVEG----LRFTIWDIGGQK 71
Query: 348 XFGGLRXGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEGI---PIVLCGNKVDI- 515
Y+ + I + D + + N ++L+ V E + I++ NK D+
Sbjct: 72 TLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELL-VEEKLLFTSILVLANKSDVS 130
Query: 516 ----KDRKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 641
+ K I ++ + + + +SA + N + WLA L
Sbjct: 131 GALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDL 176
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 29.5 bits (63), Expect = 0.93
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = +3
Query: 333 TAGQXXFGGLRXGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVC--EGIPIVLCGNK 506
TAGQ + L + I ++++ +TS+ +++ V ++ E +PIV+ GNK
Sbjct: 61 TAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNK 120
Query: 507 VDI-KDRKVKAKT-IVFHRKKNLQYYDISAKSNYNFEKPF 620
D+ R V A+ + + + SA+ N N + F
Sbjct: 121 SDLHMQRAVTAEEGKALANEWKCAWTEASARHNENVARAF 160
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 27.9 bits (59), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 416 GYVEHDDSTLSLNIVSXSKTTKLXLSGCXPHIKTNW 309
G ++ D T + I+S + T GC P+ KTNW
Sbjct: 393 GEPQNVDETRASEILSQDELTVDVDLGCGPYAKTNW 428
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 27.9 bits (59), Expect = 2.8
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 666 VAMPALLPPEVTMDPQWQNQIEKDLQDAQNTALPEEDED 782
+++P PP D + +E+D++D AL EDE+
Sbjct: 29 LSLPPSSPPPEFSDEAAEALVEEDIEDLDGEALDVEDEE 67
>SPAC3A11.04 |||siepin homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 27.1 bits (57), Expect = 5.0
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 91 FNLAFLLQSRSQIAIKQRKWQLLCPHSSVSWXALVVLAKQPLSKAIXLERSSKNXLRLWV 270
F ++ Q R+Q ++KQ K +L PH S L ++ PL LE + +RL+
Sbjct: 80 FMVSVDFQDRNQRSLKQVKRTVLLPHRSPIHEYLKLIVCSPLYFMGILEETDIVNVRLFE 139
Query: 271 SK 276
S+
Sbjct: 140 SE 141
>SPAC2F7.17 |||peptide chain release factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 396
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 696 VTMDPQWQNQIEKDLQDAQNTALPEED 776
VT + N+I K ++D +NT LP+ D
Sbjct: 112 VTEINEISNKIPKSIEDLENTLLPQAD 138
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,391,143
Number of Sequences: 5004
Number of extensions: 91367
Number of successful extensions: 299
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 283
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 621560784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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