Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP27_F_I13
(1205 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical pr... 149 4e-36
U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical pr... 128 8e-30
Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical... 60 2e-09
L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical p... 59 5e-09
Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical pr... 56 7e-08
Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical pr... 43 5e-04
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 40 0.004
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 40 0.004
Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical pr... 37 0.033
Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical pr... 37 0.033
AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical ... 35 0.10
AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical ... 34 0.23
AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical ... 34 0.23
AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical ... 34 0.23
AL023856-7|CAA19563.2| 326|Caenorhabditis elegans Hypothetical ... 32 0.93
AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical ... 32 0.93
AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical ... 32 0.93
AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical ... 32 0.93
Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical pr... 31 1.2
AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein. 31 1.2
Z81484-10|CAE11298.1| 328|Caenorhabditis elegans Hypothetical p... 31 2.2
Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical p... 29 5.0
Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical pr... 29 5.0
AL023856-8|CAA19565.2| 326|Caenorhabditis elegans Hypothetical ... 29 5.0
Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical p... 29 6.6
Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical pr... 29 6.6
Z70780-2|CAA94821.1| 468|Caenorhabditis elegans Hypothetical pr... 29 6.6
U61950-3|AAC24288.1| 469|Caenorhabditis elegans Hypothetical pr... 29 8.7
>Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical
protein M01E5.2 protein.
Length = 358
Score = 149 bits (361), Expect = 4e-36
Identities = 78/181 (43%), Positives = 115/181 (63%), Gaps = 12/181 (6%)
Frame = +1
Query: 382 ITAGHGEASRKTKIIGTPGEDIKLEVPLGVTVYREXGTVLGSIDKEDQTVIIARGGPGGT 561
+ A +GE R G + ++EVPLG TV++ G + ++ E+ I ARGG GG
Sbjct: 96 VRAQNGEFGRSKSCHGKSADHKEVEVPLG-TVFKADGNTIFELNNENDMFIAARGGVGGR 154
Query: 562 PQNNFL------------GHFGQTHHIRLDLKLIADIGLVGFPNAGKSSLLKAISRAKPR 705
++ G G+ ++++++A GLVGFPNAGKSSLL+AISRAKP+
Sbjct: 155 GNQFYVSNEVRKPFKAEYGGEGEELIYDVEMRVMATAGLVGFPNAGKSSLLRAISRAKPK 214
Query: 706 IANYPFTTIKPNKGVMVYADKRQISIADLPGLIEGAHVNIGLGHTFLKHVERTKXLLFIA 885
+A+YPFTT+ P+ GV+ Y D QI++AD+PGLIE +H+N GLG +FLKH+ER + L ++
Sbjct: 215 VASYPFTTLHPHIGVVFYEDFEQIAVADIPGLIEDSHLNKGLGISFLKHIERCESLWYVL 274
Query: 886 D 888
D
Sbjct: 275 D 275
>U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical
protein C26E6.12 protein.
Length = 390
Score = 128 bits (309), Expect = 8e-30
Identities = 75/182 (41%), Positives = 106/182 (58%), Gaps = 9/182 (4%)
Frame = +1
Query: 382 ITAGHGEASRKTKIIGTPGEDIKLEVPLGVTVY-REXGTVLGSIDKEDQTVIIARGGPGG 558
I + +GEA+ K +IG + +VP+G+ V RE ++ K +IARGG GG
Sbjct: 79 IRSENGEAATKIMLIGQHAKHQFFDVPVGIEVVDREKNKLIARCSKPFHRYLIARGGEGG 138
Query: 559 TPQNNFLGHFGQTHHIRLDLKLIADIGLVGFPNAGKSSLLKAISRAKP-RIANYPFTTIK 735
+ + G G T + + LKL +IGL+GFPNAGKS+LLKA+ K +IA+Y FTT+
Sbjct: 139 YSKIGYKGSKGDTFDVEIHLKLRPNIGLLGFPNAGKSTLLKALVPEKSVKIADYAFTTVN 198
Query: 736 P------NKGVMVYADKR-QISIADLPGLIEGAHVNIGLGHTFLKHVERTKXLLFIADVK 894
P NK D +SIADLPG+IEGA +N G G+ FLKH+E ++ + D +
Sbjct: 199 PQVAFFKNKEEFSVEDPSFTLSIADLPGIIEGASMNRGKGYKFLKHLEYADIVVMVVDCQ 258
Query: 895 GF 900
GF
Sbjct: 259 GF 260
>Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 60.5 bits (140), Expect = 2e-09
Identities = 34/88 (38%), Positives = 47/88 (53%)
Frame = +1
Query: 628 ADIGLVGFPNAGKSSLLKAISRAKPRIANYPFTTIKPNKGVMVYADKRQISIADLPGLIE 807
A IG VGFP+ GKS+LL ++ +A Y FTT+ GV+ Y + I + DLPG+IE
Sbjct: 63 ARIGFVGFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRYKGAK-IQLLDLPGIIE 121
Query: 808 GAHVNIGLGHTFLKHVERTKXLLFIADV 891
GA G G + +L + DV
Sbjct: 122 GAKDGKGRGKQVIAVARTCSLILMVLDV 149
>AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 60.5 bits (140), Expect = 2e-09
Identities = 34/88 (38%), Positives = 47/88 (53%)
Frame = +1
Query: 628 ADIGLVGFPNAGKSSLLKAISRAKPRIANYPFTTIKPNKGVMVYADKRQISIADLPGLIE 807
A IG VGFP+ GKS+LL ++ +A Y FTT+ GV+ Y + I + DLPG+IE
Sbjct: 63 ARIGFVGFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRYKGAK-IQLLDLPGIIE 121
Query: 808 GAHVNIGLGHTFLKHVERTKXLLFIADV 891
GA G G + +L + DV
Sbjct: 122 GAKDGKGRGKQVIAVARTCSLILMVLDV 149
>L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical
protein C02F5.3 protein.
Length = 366
Score = 59.3 bits (137), Expect = 5e-09
Identities = 31/87 (35%), Positives = 47/87 (54%)
Frame = +1
Query: 628 ADIGLVGFPNAGKSSLLKAISRAKPRIANYPFTTIKPNKGVMVYADKRQISIADLPGLIE 807
A + +VGFP+ GKS+LL +++ A Y FTT+ GV+ Y + I + DLPG+IE
Sbjct: 63 ARVAMVGFPSVGKSTLLSSMTSTHSEAAGYEFTTLTCIPGVISY-NGANIQLLDLPGIIE 121
Query: 808 GAHVNIGLGHTFLKHVERTKXLLFIAD 888
GA G G + + +L + D
Sbjct: 122 GASQGKGRGRQVISVAKTADLILMMLD 148
>Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical
protein W08E3.3 protein.
Length = 395
Score = 55.6 bits (128), Expect = 7e-08
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 16/99 (16%)
Frame = +1
Query: 634 IGLVGFPNAGKSSLLKAISRAKPRIANYPFTTIKPNKGVMVYADKR-------------- 771
+G++G PN GKS+ +++++ + N+PF TI PN+ + D R
Sbjct: 24 VGILGLPNVGKSTFFNVLTKSEAQAENFPFCTIDPNESRVAVQDDRFDWLVNHYKPASKV 83
Query: 772 --QISIADLPGLIEGAHVNIGLGHTFLKHVERTKXLLFI 882
+++ D+ GL++GA GLG+ FL HV L +
Sbjct: 84 PAFLNVTDIAGLVKGASEGQGLGNAFLSHVSACDALFHL 122
>Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical
protein K01C8.9 protein.
Length = 556
Score = 42.7 bits (96), Expect = 5e-04
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 613 DLKLIADIGLVGFPNAGKSSLLKAISRAKP-RIANYPFTTIKPNKGVMVYADKRQISIAD 789
D+K +G+VGFPN GKSS++ ++ R K + N P T K + + I + D
Sbjct: 255 DIKTSIRVGVVGFPNVGKSSVINSLKRRKACNVGNLPGIT----KEIQEVELDKNIRLID 310
Query: 790 LPGLIEGAHVNIGLGHTFLKHVERTKXLL 876
PG+I + ++ LK+ R LL
Sbjct: 311 SPGVILVSQKDLDPIEVALKNAIRVDNLL 339
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 39.9 bits (89), Expect = 0.004
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +1
Query: 640 LVGFPNAGKSSLLKAISRAKPRIANYPFTTIKPNKGVMVYADKRQISIADLPGLIE 807
L GFPN GKSS + ++RA + Y FTT G + Y R + D PG+++
Sbjct: 174 LCGFPNVGKSSFINNVTRADVEVQPYAFTTKALYVGHLDYRFLRW-QVIDTPGILD 228
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 39.9 bits (89), Expect = 0.004
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +1
Query: 640 LVGFPNAGKSSLLKAISRAKPRIANYPFTTIKPNKGVMVYADKRQISIADLPGLIE 807
L GFPN GKSS + ++RA + Y FTT G + Y R + D PG+++
Sbjct: 174 LCGFPNVGKSSFINNVTRADVEVQPYAFTTKALYVGHLDYRFLRW-QVIDTPGILD 228
>Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical
protein E02H1.2 protein.
Length = 394
Score = 36.7 bits (81), Expect = 0.033
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +1
Query: 634 IGLVGFPNAGKSSLLKAISRAKPRIANYPFTTIKPNKGVMVYADKRQISIADLPGLIEGA 813
+ ++G PN GKS L ++ R + T N + +D Q+ D PG + +
Sbjct: 36 LAVIGAPNVGKSLLTNSLIRCPLSAVSSKMDTTTRNISASICSDSTQLVFVDSPGAVSTS 95
Query: 814 HV 819
HV
Sbjct: 96 HV 97
>Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical
protein E02H1.2 protein.
Length = 394
Score = 36.7 bits (81), Expect = 0.033
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +1
Query: 634 IGLVGFPNAGKSSLLKAISRAKPRIANYPFTTIKPNKGVMVYADKRQISIADLPGLIEGA 813
+ ++G PN GKS L ++ R + T N + +D Q+ D PG + +
Sbjct: 36 LAVIGAPNVGKSLLTNSLIRCPLSAVSSKMDTTTRNISASICSDSTQLVFVDSPGAVSTS 95
Query: 814 HV 819
HV
Sbjct: 96 HV 97
>AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical
protein Y67D2.4 protein.
Length = 313
Score = 35.1 bits (77), Expect = 0.10
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Frame = +1
Query: 640 LVGFPNAGKSSLLKA-------ISRAKPRIANYPFTTIKPNKGVMVYADKRQISIADLPG 798
+VG PN GKSSL+ A I R P T++ V + DK + I D PG
Sbjct: 120 VVGIPNVGKSSLINAIRTHTLGIKRKAVEAGARPGVTVRVQNRVRI-LDKPPVYIIDTPG 178
Query: 799 LIEGAHVNI 825
++ H N+
Sbjct: 179 VLSPNHRNV 187
>AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical
protein C53H9.2c protein.
Length = 247
Score = 33.9 bits (74), Expect = 0.23
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 634 IGLVGFPNAGKSSLLKAISRAKPRIANYPFTTIKPNKGVMVYADKRQISIADLPGLI 804
+G+VG+PN GKSS + ++ K + T K ++ D Q+ + D PGL+
Sbjct: 132 VGMVGYPNVGKSSTINKLAGGKK--VSVSATPGKTRHFQTIHIDS-QLCLCDCPGLV 185
>AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical
protein C53H9.2b protein.
Length = 385
Score = 33.9 bits (74), Expect = 0.23
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 634 IGLVGFPNAGKSSLLKAISRAKPRIANYPFTTIKPNKGVMVYADKRQISIADLPGLI 804
+G+VG+PN GKSS + ++ K + T K ++ D Q+ + D PGL+
Sbjct: 132 VGMVGYPNVGKSSTINKLAGGKK--VSVSATPGKTRHFQTIHIDS-QLCLCDCPGLV 185
>AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical
protein C53H9.2a protein.
Length = 554
Score = 33.9 bits (74), Expect = 0.23
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 634 IGLVGFPNAGKSSLLKAISRAKPRIANYPFTTIKPNKGVMVYADKRQISIADLPGLI 804
+G+VG+PN GKSS + ++ K + T K ++ D Q+ + D PGL+
Sbjct: 301 VGMVGYPNVGKSSTINKLAGGKK--VSVSATPGKTRHFQTIHIDS-QLCLCDCPGLV 354
>AL023856-7|CAA19563.2| 326|Caenorhabditis elegans Hypothetical
protein Y94A7B.1 protein.
Length = 326
Score = 31.9 bits (69), Expect = 0.93
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 1068 YXVXLFILXNVFQSQEIHLLXQYCXLFKTPYCIIPVPY--LTAELFXSMNDL 919
Y LFI+ + S IHL +YC LFKTP + V + L+ S+ DL
Sbjct: 12 YSNVLFIIAGI--SFPIHLFGEYCILFKTPKVMKSVKWSLFDVHLWSSLMDL 61
>AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical
protein T19A6.2c protein.
Length = 610
Score = 31.9 bits (69), Expect = 0.93
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 571 NFLGHFGQTHHIRLDLKLIADIGLVGFPNAGKSSLLKAISRAK 699
N L F + H R + +G +G+PN GKSSL+ + + K
Sbjct: 311 NLLRQFAKLHPDRPQIS----VGFIGYPNVGKSSLVNTLRKKK 349
>AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical
protein T19A6.2b protein.
Length = 592
Score = 31.9 bits (69), Expect = 0.93
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 571 NFLGHFGQTHHIRLDLKLIADIGLVGFPNAGKSSLLKAISRAK 699
N L F + H R + +G +G+PN GKSSL+ + + K
Sbjct: 252 NLLRQFAKLHPDRPQIS----VGFIGYPNVGKSSLVNTLRKKK 290
>AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical
protein T19A6.2a protein.
Length = 651
Score = 31.9 bits (69), Expect = 0.93
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 571 NFLGHFGQTHHIRLDLKLIADIGLVGFPNAGKSSLLKAISRAK 699
N L F + H R + +G +G+PN GKSSL+ + + K
Sbjct: 311 NLLRQFAKLHPDRPQIS----VGFIGYPNVGKSSLVNTLRKKK 349
>Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical protein
C26H9A.1 protein.
Length = 966
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -3
Query: 1041 NVFQS-QEIHLLXQYCXLFKTPYCIIPVPYLTAELF 937
NVFQS + + + QYC + PY II P+L A +F
Sbjct: 440 NVFQSIVDSYGVSQYCEVNPAPYTIITFPFLFAVMF 475
>AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein.
Length = 966
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -3
Query: 1041 NVFQS-QEIHLLXQYCXLFKTPYCIIPVPYLTAELF 937
NVFQS + + + QYC + PY II P+L A +F
Sbjct: 440 NVFQSIVDSYGVSQYCEVNPAPYTIITFPFLFAVMF 475
>Z81484-10|CAE11298.1| 328|Caenorhabditis elegans Hypothetical
protein C47A10.11 protein.
Length = 328
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -3
Query: 1071 SYXVXLFILXNVFQSQEIHLLXQYCXLFKTPYCIIPVPY 955
SY L+I+ + + IHLL YC LFKTP + V +
Sbjct: 11 SYSQVLYIIAEI--TFPIHLLGGYCILFKTPLAMKSVKW 47
>Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical
protein ZK262.11 protein.
Length = 338
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 1020 IHLLXQYCXLFKTPYCIIPVPYLTAELFXSMNDLD 916
+HLL YC ++KTP + V + ++ S+ LD
Sbjct: 32 VHLLGLYCIIYKTPLQMAAVKWYLLQMHVSVMALD 66
>Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical protein
C43D7.6 protein.
Length = 338
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 1020 IHLLXQYCXLFKTPYCIIPVPYLTAELFXSMNDLD 916
+HLL YC ++KTP + V + ++ S+ LD
Sbjct: 32 VHLLGLYCIIYKTPLQMAAVKWYLLQMHVSVMALD 66
>AL023856-8|CAA19565.2| 326|Caenorhabditis elegans Hypothetical
protein Y94A7B.3 protein.
Length = 326
Score = 29.5 bits (63), Expect = 5.0
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -3
Query: 1071 SYXVXLFILXNVFQSQEIHLLXQYCXLFKTPYCIIPVPY--LTAELFXSMNDLDV 913
+Y LFI+ S IHL YC LFKTP + V + + F ++ D V
Sbjct: 11 TYSTILFIIAGF--SFPIHLFGGYCILFKTPEVMKSVKWSLFSFHFFSALMDFSV 63
>Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical
protein F02E9.10c protein.
Length = 455
Score = 29.1 bits (62), Expect = 6.6
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Frame = +1
Query: 646 GFPNAGKSSLLKAISRAKPRIANY-PFTTIKPNKGVMVYADKRQISIADLPGLIEGAH-V 819
G+ A S L I + I PF T+K + D + ++I L G IE +
Sbjct: 130 GYVTASYSGHLNEIQHSSNEIIRQEPFPTVKQISCLKYSRDAKYLAIGQLDGAIEMLYSE 189
Query: 820 NIGLGHTFLKHVERTKXLLFIADVKGFS*ALNIQIV--HAXKQF 945
N H + H R + + F+ + + F A + +++ H+ +F
Sbjct: 190 NFKNYHKYEVHSMRIRKIEFLPNEERFLSACDDRLIKLHSLSEF 233
>Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical
protein F02E9.10a protein.
Length = 451
Score = 29.1 bits (62), Expect = 6.6
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Frame = +1
Query: 646 GFPNAGKSSLLKAISRAKPRIANY-PFTTIKPNKGVMVYADKRQISIADLPGLIEGAH-V 819
G+ A S L I + I PF T+K + D + ++I L G IE +
Sbjct: 130 GYVTASYSGHLNEIQHSSNEIIRQEPFPTVKQISCLKYSRDAKYLAIGQLDGAIEMLYSE 189
Query: 820 NIGLGHTFLKHVERTKXLLFIADVKGFS*ALNIQIV--HAXKQF 945
N H + H R + + F+ + + F A + +++ H+ +F
Sbjct: 190 NFKNYHKYEVHSMRIRKIEFLPNEERFLSACDDRLIKLHSLSEF 233
>Z70780-2|CAA94821.1| 468|Caenorhabditis elegans Hypothetical
protein F46B6.4 protein.
Length = 468
Score = 29.1 bits (62), Expect = 6.6
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +1
Query: 628 ADIGLVGFPNAGKSSLLKAISRAKPRI-ANYPFTTIKPNKGVMVYADKRQISIADLPGLI 804
A + +VG+ N+GK+SL+K ++ A + F T+ + + R D G +
Sbjct: 235 AVVAVVGYTNSGKTSLVKKLTGAASLTPKDQLFATLDTTRHLAKLPSGRSAVFTDTIGFL 294
Query: 805 EGAHVN-IGLGHTFLKHVERTKXLLFIADV 891
++ I L HV+ ++ + D+
Sbjct: 295 SDLPMHLIAAFEATLAHVKSADVIIHLRDI 324
>U61950-3|AAC24288.1| 469|Caenorhabditis elegans Hypothetical
protein C45E5.2 protein.
Length = 469
Score = 28.7 bits (61), Expect = 8.7
Identities = 22/105 (20%), Positives = 46/105 (43%)
Frame = +1
Query: 580 GHFGQTHHIRLDLKLIADIGLVGFPNAGKSSLLKAISRAKPRIANYPFTTIKPNKGVMVY 759
G FG + + ++D ++GF ++ + A +K A + F +K N +
Sbjct: 355 GQFGNPSDDQSQYEHVSDKRIIGFYTEDATTEITASELSKLTHAVFGFLYLKTNGTFDIL 414
Query: 760 ADKRQISIADLPGLIEGAHVNIGLGHTFLKHVERTKXLLFIADVK 894
D+ + +L LI+ ++N+ + + + T +ADVK
Sbjct: 415 NDRGKGRFKNLNRLIKYENLNVKMMFSIGGWADSTNFRSVVADVK 459
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,333,990
Number of Sequences: 27780
Number of extensions: 397005
Number of successful extensions: 1023
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3318157644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -