Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP27_F_I12
         (1218 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_1000 + 10138260-10138652,10138832-10139017,10139190-101394...    30   3.2  
10_06_0153 + 11285685-11285716,11288322-11288974,11289541-11289647     29   7.4  

>12_01_1000 +
           10138260-10138652,10138832-10139017,10139190-10139463,
           10139815-10140065
          Length = 367

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 11/28 (39%), Positives = 21/28 (75%)
 Frame = +3

Query: 570 GDEEDRARLAAMSEKEREQEIFKRIERR 653
           G +E+RA +AA  E+ERE+ ++  ++R+
Sbjct: 107 GGDEERAMIAASCERERERGVWAHLQRK 134


>10_06_0153 + 11285685-11285716,11288322-11288974,11289541-11289647
          Length = 263

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 549 GYDENLMGDE-EDRARLAAMSEKEREQEIFKRIERRDLMKTRW 674
           GY + L  +  +D AR      K+R+ E  +R +R + ++TRW
Sbjct: 72  GYSKPLWDEHAKDEARRRHREAKQRKNEALQRQQRIEQVRTRW 114


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,588,073
Number of Sequences: 37544
Number of extensions: 265564
Number of successful extensions: 869
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3736328292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)